Contig 005845:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009A23Sequence330010915 (6)ref|XP_006357316.1|4e-15PREDICTED: probable inactive receptor kinase At5g58300-like [Solanum tuberosum]745005845 (6)gb|EYU36892.1|1e-80hypothetical protein MIMGU_mgv1a0177021mg, partial [Erythranthe guttata]
JMSF010D23Sequence393010915 (6)ref|XP_009607538.1|1e-29PREDICTED: probable inactive receptor kinase At5g58300 [Nicotiana tomentosiform753005845 (6)gb|EYU36892.1|2e-94hypothetical protein MIMGU_mgv1a0177021mg, partial [Erythranthe guttata]
JMSF028P12Sequence666010915 (6)ref|XP_009760496.1|6e-67PREDICTED: probable inactive receptor kinase At5g58300 isoform X2 [Nicotiana sy735005845 (6)gb|EYU36892.1|1e-89hypothetical protein MIMGU_mgv1a0177021mg, partial [Erythranthe guttata]
JMSF035I22Sequence689010915 (6)ref|XP_006358156.1|2e-70PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Solanum586005845 (6)emb|CDP13882.1|9e-61unnamed protein product [Coffea canephora]
JMSF049F01Sequence572010915 (6)ref|XP_009607538.1|4e-28PREDICTED: probable inactive receptor kinase At5g58300 [Nicotiana tomentosiform751005845 (6)gb|EYU36892.1|5e-92hypothetical protein MIMGU_mgv1a0177021mg, partial [Erythranthe guttata]
JMSF051F13Sequence653010915 (6)ref|XP_006358156.1|1e-76PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Solanum767005845 (6)gb|EYU36892.1|4e-94hypothetical protein MIMGU_mgv1a0177021mg, partial [Erythranthe guttata]

Alignment

This contig is upended


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rJMSF010D23+                       AAATCAACTGGATTGGNATTCAAGATTGAAGATTGCGATTGGAGTAG
rJMSF049F01+                                          TCAAGANTGAAGATTGCGATTGGAGTAG
rJMSF028P12+                                                 TGAAGATTGCGATTGGAGTAG
rJMSF009A23+                                          TCAAGATTGAAGATTGCGATTGGAGTAG
rJMSF051F13+                      GAAATCAACTGGATTGGGAATCAAGATTGAAGATTGCGATTGGAGTAG
                      ____________________________________________________________
consensus                         GAAATCAACTGGATTGGGATTCAAGATTGAAGATTGCGATTGGAGTAG
 
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rJMSF010D23+          CAAAGGGTATTGCTCATGTTCATTCAG-AAGGTGGAGCTAAGTTCACTCATGGCAACATC
rJMSF049F01+          CAAAGGGTATTGCTCATGTTCATTCAG-AAGGTGGAGCTAAGTTCACTCATGGCAACATC
rJMSF028P12+          CAAANGGTATTGCTCATGTTCATTCAG-AAGGTGGAGCTAAGTTCACTCATGGCAACATC
rJMSF009A23+          CAAAGGGTATTGCTCATGTTCATTCAGAAAGGTGGAGCTAAGTTCACTCATGGCAACATC
rJMSF051F13+          CAAAGGGTATTGCTCATGTTCATTCAG-AAGGTGGAGCTAAGTTCACTCATGGCAACATC
                      ____________________________________________________________
consensus             CAAAGGGTATTGCTCATGTTCATTCAG-AAGGTGGAGCTAAGTTCACTCATGGCAACATC
 
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rJMSF010D23+          AAATCCTCAAATGTACTTCTGACAACAAGCATGGATGGCTGCATTTCTGATATCGGCTTA
rJMSF049F01+          AAATCCTCAAATGTACTTCTGACAACAAGCATGGATGGCTGCATTTCTGATATCGGCTTA
rJMSF028P12+          AAATCCTCAAATGTACTTCTGACAACAAGCATGGATGGCTGCATTTCTGATATCGGCTTA
rJMSF009A23+          AAATCCTCAAATGTACTTCTGACAACAAGCATGGATGGCTGCATTTCTGATATCGGCTTA
rJMSF051F13+          AAATCCTCAAATGTACTTCTGACAACAAGCATGGATGGCTGCATTTCTGATATCGGCTTA
                      ____________________________________________________________
consensus             AAATCCTCAAATGTACTTCTGACAACAAGCATGGATGGCTGCATTTCTGATATCGGCTTA
 
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rJMSF010D23+          TGCCCTCTGATGAACAATGCCGCTACAACCAGCCCGCGACGCCCTGGCTACCGGGCACCC
rJMSF049F01+          TGCCCTCTGATGAACAATGCCGCTACAACCAGCCCGCGACGCCCTGGCTACCGGGCACCC
rJMSF028P12+          TGCCCTCTGATGAACAATGCCGCTACAACCAGCCCGCGACGCCCTGGCTACCGGGCACCC
rJMSF035I22+                 TGATGAACAATGCCGCTACAACCAGCCCGCGACGCCCTGGCTACCGGGCACCC
rJMSF009A23+          TGCCCTCTGATGAACAATGCCGCTACAACCAGCCCGCGACGCCCTGGCTACCGGGCACCC
rJMSF051F13+          TGCCCTCTGATGAACAATGCCGCTACAACCAGCCCGCGACGCCCTGGCTACCGGGCACCC
                      ____________________________________________________________
consensus             TGCCCTCTGATGAACAATGCCGCTACAACCAGCCCGCGACGCCCTGGCTACCGGGCACCC
 
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rJMSF010D23+          GAGGTGTTCGTCGAAACGAGGAGAGTCACACAGAAGTCAGACGTGTACAGCTTCGGGGTG
rJMSF049F01+          GAGGTGTTCGTCGAAACGAGGAGAGTCACACAGAAGTCAGACGTGTACAGCTTCGGGGTG
rJMSF028P12+          GAGGTGTTCGTCGAAACGAGGAGAGTCACACAGAAGTCAGACGTGTACAGCTTCGGGGTG
rJMSF035I22+          GAGGTGTTCGTCGAAACGAGGAGAGTCACACAGAAGTCAGACGTGTACAGCTTCGGGGTG
rJMSF009A23+          GAGGTGTTCGTCGAAACGAGGAGAGTCACACAGAAGTCAGACGTGTACAGCTTCGGGGTG
rJMSF051F13+          GAGGTGTTCGTCGAAACGAGGAGAGTCACACAGAAGTCAGACGTGTACAGCTTCGGGGTG
                      ____________________________________________________________
consensus             GAGGTGTTCGTCGAAACGAGGAGAGTCACACAGAAGTCAGACGTGTACAGCTTCGGGGTG
 
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rJMSF010D23+          GTGGTCCTCGAGATGCTGACGGGCAAGTCGGCCGTGCCAGTGGCGGGGCACGACGACGTT
rJMSF049F01+          GTGGTCCTCGAGATGCTGACGGGCAAGTCGGCCGTGCCAGTGGCGGGGCATGACGACGTT
rJMSF028P12+          GTGGTCCTCGAGATGCTGACGGGCAAGTCGGCCGTGCCAGTGGCGGGGCACGACGACGTT
rJMSF035I22+          GTGGTCCTCGAGATGCTGACGGGCAAGTCGGCCGTGCCAGTGGCGGGGCACGACGACGTT
rJMSF009A23+          GTGGTCCTCGAGATGCTGACGGGCAAGTCGGCCGTGCCAGTGGCGGGGCACGACGACGTT
rJMSF051F13+          GTGGTCCTCGAGATGCTGACGGGCAAGTCGGCCGTGCCAGTGGCGGGGCACTACGACGTT
                      ____________________________________________________________
consensus             GTGGTCCTCGAGATGCTGACGGGCAAGTCGGCCGTGCCAGTGGCGGGGCACGACGACGTT
 
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rJMSF010D23+          GTTGATCTGCCGAGGTGGGTGAGGTCCGTGGTTCGGGAGGAGTGGACAGCCGAGGTGTTC
rJMSF049F01+          GTTGATCTGCCGAGGTGGGTGAGGTCCGTGGTTCGGGAGGAGTGGACAGCCGAGGTGTTC
rJMSF028P12+          GTTGATCTGCCGAGGTGGGTGAGGTCCGTGGTTCGGGAGGAGTGGACAGCCGAGGTGTTC
rJMSF035I22+          GTTGATCTGCCGAGGTGGGTGAGGTCCGTGGTTCGGGAGGAGTGGACAGCCGAGGTGTTC
rJMSF009A23+          GTTGATCTGCCGAGGTGGGTGAGGTCCGTGGTTCGGGAGGAGTGGACAGCCGAGGTGTTC
rJMSF051F13+          GTTGATCTGCCGAGGTGGGTGAGGTCCGTGGTTCGGGAGGAGTGGACAGCCGAGGTGTTC
                      ____________________________________________________________
consensus             GTTGATCTGCCGAGGTGGGTGAGGTCCGTGGTTCGGGAGGAGTGGACAGCCGAGGTGTTC
 
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rJMSF010D23+          GACGTCGAGCTGATGAAGTATCAGAACATCGAAGAGGAGATGGTGCAGATGCTTCAGATC
rJMSF049F01+          GACGTCGAGCTGATGAAGTATCAGAACATCGAAGAGGAGATGGTGCAGATGCTTCAGATC
rJMSF028P12+          GACGTCGAGCTGATGAAGTATCAGAACATCGAAGAGGAGATGGTGCAGATGCTTCAGATC
rJMSF035I22+          GACGTCGAGCTGATGAAGTATCAGAACATCGAAGAGGAGATGGTGCAGATGCTTCAGATC
rJMSF009A23+          GACGTCGAGCTGATGAAGTATCAGAACATCGAAGAGGAGATGGTGCAGATGCTTCAGATC
rJMSF051F13+          GACGTCGAGCTGATGAAGTATCAGAACATCGAAGAGGAGATGGTGCAGATGCTTCAGATC
                      ____________________________________________________________
consensus             GACGTCGAGCTGATGAAGTATCAGAACATCGAAGAGGAGATGGTGCAGATGCTTCAGATC
 
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rJMSF010D23+          GCTCTGTCGTGCGTTGCAAAGGCGCCCGACATGCGGCCGACGATGGCAGAGGTTGTTCGA
rJMSF049F01+          GCTCTGTCGTGCGTTGCAAAGGCGCCCGACATGCGGCCGACGATGGCAGAGGTTGTTCGA
rJMSF028P12+          GCTCTGTCGTGCGTTGCAAAGGCGCCCGACATGCGGCCGACGATGGCAGAGGTTGTTCGA
rJMSF035I22+          GCTCTGTCGTGCGTTGCAAAGGCGCCCGACATGCGGCCGACGATGGCAGAGGTTGTTCGA
rJMSF009A23+          GCTCTGTCGTGCGTTGCAAAGGCGCCCGACATGCGGCCGACGATGGCAGAGGTTGTTCGA
rJMSF051F13+          GCTCTGTCGTGCGTTGCAAAGGCGCCCGACATGCGGCCGACGATGGCAGAGGTTGTTCGA
                      ____________________________________________________________
consensus             GCTCTGTCGTGCGTTGCAAAGGCGCCCGACATGCGGCCGACGATGGCAGAGGTTGTTCGA
 
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rJMSF010D23+          GCTATCGAGGGAATTCGCGGGCCCGCAGAGACAGAGACAGAGCCACAGCCATCCTCAGAT
rJMSF049F01+          GCTATCGAGGGAATTCGCGGGCCCGCAGAGACAGAGACAGAGCCACAGCCATCCTCAGAT
rJMSF028P12+          GCTATCGAGGGAATTCGCGGGCCCGCAGAGACAGAGACAGAGCCACAGCCATCCTCAGAT
rJMSF035I22+          GCTATCGAGGGAATTCGCGGGCCCGCAGAGACAGAGACAGAGCCACAGCCATCCTCAGAT
rJMSF009A23+          GCTATCGAGGGAATTCGCGGGCCCGCAGAGACAGAGACAGAGCCACAGCCATCCTCAGAT
rJMSF051F13+          GCTATCGAGGGAATTCGCGGGCCCGCAGAGACAGAGACAGAGCCACAGCCATCCTCAGAT
                      ____________________________________________________________
consensus             GCTATCGAGGGAATTCGCGGGCCCGCAGAGACAGAGACAGAGCCACAGCCATCCTCAGAT
 
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rJMSF010D23+          GATAACAATGGAGGCACCCCTGAGTGAATTTGCCATGAATCTGCAATGACCAGTTGCACA
rJMSF049F01+          GATAACAATGGAGGCACCCCTGAGTGAATTTGCCATGAATCTGCAATGACCAGTTGCACA
rJMSF028P12+          GATAACAATGGAGGCACCCCTGAGTGAATTTGCCATGAATCTGCAATGACCAGTTGCACA
rJMSF035I22+          GATAACAATGGAGGCACCCCTGAGTGAATTTGCCATGAATCTGCAATGACCAGTTGCACA
rJMSF009A23+          GATAACAATGGAGGCACCCCTGAGTGAATTTGCCATGAATCTGCAATGACCAGTTGCACA
rJMSF051F13+          GATAACAATGGAGGCACCCCTGAGTGAATTTGCCATGAATCTGCAATGACCAGTTGCACA
                      ____________________________________________________________
consensus             GATAACAATGGAGGCACCCCTGAGTGAATTTGCCATGAATCTGCAATGACCAGTTGCACA
 
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rJMSF010D23+          CTTTCCTTAATGCTTCCTTAGATTATAATGTTGTTTAATGTTTCCATTAGATGTTCTTTC
rJMSF049F01+          CTTTCCTTAATGCTTCCTTAGATTATAATGTTGTTTAATGTTTCCATTAGATGTTCTTTC
rJMSF028P12+          CTTTCCTTAATGCTTCCTTAGATTATAATGTTGTTTAATGTTTCCATTAGATGTTCTTTC
rJMSF035I22+          CTTTCCTTAATGCTTCCTTAGATTATAATGTTGTTTAATGTTTCCATTAGATGTTCTTTC
rJMSF009A23+          CTTTCCTTAATGCTTCCTTAGATTATAATGTTGTTTAATGTTTCCATTAGATGTTCTTTC
rJMSF051F13+          CTTTCCTTAATGCTTCCTTAGATTATAATGTTGTTTAATGTTTCCATTAGATGTTCTTTC
                      ____________________________________________________________
consensus             CTTTCCTTAATGCTTCCTTAGATTATAATGTTGTTTAATGTTTCCATTAGATGTTCTTTC
 
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rJMSF010D23+          ATGTTTGCATATCTTTATGCAATTCCCTATTGTGCCATTTGTAGATT             
rJMSF049F01+          ATGTTTGCATATCTTTATGCAATTCCCTATTGTGCCATTTGTAGATTGTTTGATCA    
rJMSF028P12+          ATGTTTGCATATCTTTATGCAATTCCCTATTGTGCCATTTGTAGATTG            
rJMSF035I22+          ATGTTTGCATATCTTTATGCAATTCCCTATTGTGCCATTTGTAGATTGT           
rJMSF009A23+          ATGTTTGCATATCTTTATGCAATTCCCTATTGTGCCATTTGTAGATTGT           
rJMSF051F13+          ATGTTTGCATATCTTTATGCAATTCCCTATTGTGCCATTTGTAGATTGTTTGATCAATCA
                      ____________________________________________________________
consensus             ATGTTTGCATATCTTTATGCAATTCCCTATTGTGCCATTTGTAGATTGTTTGATCAATCA