Contig 005837:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF050G13+                                     CAATACTAAAAATACGTCGACTTGGCCTTTCACC
                      ____________________________________________________________
consensus                                       CAATACTAAAAATACGTCGACTTGGCCTTTCACC
 
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JMSF050G13+           CGCCTTCACCTAACAATTCCTAGTAACTAATTGCTGGACTTGACCCTTCACGGGGCTAAC
rJMSF050G13-                  CCTAACAATTCCTAGTAACTAATTGCTGGACTTGACCCTTCACGGGGCTAAC
                      ____________________________________________________________
consensus             CGCCTTCACCTAACAATTCCTAGTAACTAATTGCTGGACTTGACCCTTCACGGGGCTAAC
 
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JMSF050G13+           CCAAAACTACTGGCTGAACCTAAGCTGAATATAACCAACGATGAATCAAAATTGAACCAA
rJMSF050G13-          CCAAAACTACTGGCTGAACCTAAGCTGAATATAACCAACGATGAATCAAAATTGAACCAA
                      ____________________________________________________________
consensus             CCAAAACTACTGGCTGAACCTAAGCTGAATATAACCAACGATGAATCAAAATTGAACCAA
 
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JMSF050G13+           CCACATACTCAGCACCGCAATGTCTAATTCAAATCTCAACTCGCACTTAGCTACAAAACA
rJMSF050G13-          CCACATACTCAGCACCGCAATGTCTAATTCAAATCTCAACTCGCACTTAGCTACAAAACA
                      ____________________________________________________________
consensus             CCACATACTCAGCACCGCAATGTCTAATTCAAATCTCAACTCGCACTTAGCTACAAAACA
 
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JMSF050G13+           AACCAAAGAAAAGGGGGCAGAAGCAATTTTGCAAGAGAACCATGAACTACCCCAAATCGT
rJMSF050G13-          AACCAAAGAAAAGGGGGCAGAAGCAATTTTGCAAGAGAACCATGAACTACCCCAAATCGT
                      ____________________________________________________________
consensus             AACCAAAGAAAAGGGGGCAGAAGCAATTTTGCAAGAGAACCATGAACTACCCCAAATCGT
 
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JMSF050G13+           TATGAACTCGAAACTCCGTACCTTGAAATGAATGGGCAGCCATTGAGAAGACTTATTGGG
rJMSF050G13-          TATGAACTCGAAACTCCGTACCTTGAAATGAATGGGCAGCCATTGAGAAGACTTATTGGG
                      ____________________________________________________________
consensus             TATGAACTCGAAACTCCGTACCTTGAAATGAATGGGCAGCCATTGAGAAGACTTATTGGG
 
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JMSF050G13+           GGTTTTGTTGATAAGGGTCTCCTCAACAAGTAGTCGTATCTGGCGTCCGAGTTGTCTGTT
rJMSF050G13-          GGTTTTGTTGATAAGGGTCTCCTCAACAAGTAGTCGTATCTGGCGTCCGAGTTGTCTGTT
                      ____________________________________________________________
consensus             GGTTTTGTTGATAAGGGTCTCCTCAACAAGTAGTCGTATCTGGCGTCCGAGTTGTCTGTT
 
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JMSF050G13+           GTGCTTGAATGGCTGGAGAGTTGCCAAGAAAATGGGTTTAAGAGTGTGGGTTTTGGGAGG
JMSF017K21+                                     AGAAAATGGGTTTAAGAGTGTGGGTTTTGGGAGG
rJMSF050G13-          GTGCTTGAATGGCTGGAGAGTTGCCAAGAAAATGGGTTTAAGAGTGTGGGTTTTGGGAGG
                      ____________________________________________________________
consensus             GTGCTTGAATGGCTGGAGAGTTGCCAAGAAAATGGGTTTAAGAGTGTGGGTTTTGGGAGG
 
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JMSF050G13+           GCAGGAATTCCATGGCAGAAGGCCTTGCTTCATCATCATCTTCTAATTCTTCTTCTTCTC
JMSF017K21+           GCAGGAATTCCATGGCAGAAGGCCTTGCTTCATCATCATCTTCTAATTCTTCTTCTTCTC
rJMSF050G13-          GCAGGAATTCCATGGCAGAAGGCCTTGCTTCATCATCATCTTCTAATTCTTCTTCTTCTC
                      ____________________________________________________________
consensus             GCAGGAATTCCATGGCAGAAGGCCTTGCTTCATCATCATCTTCTAATTCTTCTTCTTCTC
 
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JMSF050G13+           CACTGCTTAGTCTATAATAGAATCTTGATTCCTTTTCCTATCTAGTTCCTGATAACGGAA
JMSF017K21+           CACTGCTTAGTCTATAATAGAATCTTGATTCCTTTTCCTATCTAGTTCCTGATAACGGAA
rJMSF050G13-          CACTGCTTAGTCTATAATAGAATCTTGATTCCTTTTCCTATCTAGTTCCTGATAACGGAA
                      ____________________________________________________________
consensus             CACTGCTTAGTCTATAATAGAATCTTGATTCCTTTTCCTATCTAGTTCCTGATAACGGAA
 
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JMSF050G13+           GGAAAATCACCAAAAATTTAACGTAGTATTCTTCAAGTACAGTACAGTGGCGTTCCGGCT
JMSF017K21+           GGAAAATCACCAAAAATTTAACGTAGTATTCTTCAAGTACAGTACAGTGGCGTTCCGGCT
rJMSF050G13-          GGAAAATCACCAAAAATTTAACGTAGTATTCTTCAAGTACAGTACAGTGGCGTTCCGGCT
                      ____________________________________________________________
consensus             GGAAAATCACCAAAAATTTAACGTAGTATTCTTCAAGTACAGTACAGTGGCGTTCCGGCT
 
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JMSF050G13+           CTGTGCCCATTGACCAACGCCCATTGCCATTTGATTTGGGTTCCTAATTCCTATCTTCC 
JMSF017K21+           CTGTGCCCATTGACCAACGCCCATTGCCATTTGATTTGGGTTCCTAATTCCTATCTTCC 
rJMSF050G13-          CTGTGCCCATTGACCAACGCCCATTGCCATTTGATTTGGGTTCCTAATTCCTATCTTCCT
                      ____________________________________________________________
consensus             CTGTGCCCATTGACCAACGCCCATTGCCATTTGATTTGGGTTCCTAATTCCTATCTTCCT