Contig 005836:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF016A10+                    TATCGCAATAAGTTTCTCTGTTTATGAATCTTTGAGATCTTATNGGCTAG
rJMSF050F12+                                                          CTTATNGGCTAG
                      ____________________________________________________________
consensus                       TATCGCAATAAGTTTCTCTGTTTATGAATCTTTGAGATCTTATNGGCTAG
 
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rJMSF016A10+          CTCACAGGCCTGATGATCCCACTGTTCTCATCAGTCTTACTTGTGGAAGTCTTTCTGGAA
rJMSF050F12+          CTCACAGGCCTGATGATCCCACTGTTCTCATCAGTCTTACTTGTGGAAGTCTTTCTGGAA
                      ____________________________________________________________
consensus             CTCACAGGCCTGATGATCCCACTGTTCTCATCAGTCTTACTTGTGGAAGTCTTTCTGGAA
 
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rJMSF016A10+          TTGCATCATCTACTGCAACATTCCCTTTGGACCTTGTAAGGCGAAGAATGCAATTGGAAG
rJMSF050F12+          TTGCATCATCTACTGCAACATTCCCTTTGGACCTTGTAAGGCGAAGAATGCAATTGGAAG
                      ____________________________________________________________
consensus             TTGCATCATCTACTGCAACATTCCCTTTGGACCTTGTAAGGCGAAGAATGCAATTGGAAG
 
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rJMSF016A10+          GGGCTGGTGGTCGAGCGCGTGTGTATAACACTGGCTTACTCGGGGCATTTAGGCACATAA
rJMSF050F12+          GGGCTGGTGGTCGAGCGCGTGTGTATAACACTGGCTTACTCGGGGCATTTAGGCACATAA
                      ____________________________________________________________
consensus             GGGCTGGTGGTCGAGCGCGTGTGTATAACACTGGCTTACTCGGGGCATTTAGGCACATAA
 
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rJMSF016A10+          TTCAAACAGAAGGCTTTTGTGGGTTTTATAGAGGCATTATGCCCGAGTACTACAAAGTTG
rJMSF050F12+          TTCAAACAGAAGGCTTTTGTGGGTTTTATAGAGGCATTATGCCCGAGTACTACAAAGTTG
                      ____________________________________________________________
consensus             TTCAAACAGAAGGCTTTTGTGGGTTTTATAGAGGCATTATGCCCGAGTACTACAAAGTTG
 
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rJMSF016A10+          TACCTGGCATGGGAATTGTATTCATGACATACGAGACGCTGAAGAAACTTCTATCTGAAT
rJMSF050F12+          TACCTGGCATGGGAATTGTATTCATGACATACGAGACGCTGAAGAAACTTCTATCTGAAT
                      ____________________________________________________________
consensus             TACCTGGCATGGGAATTGTATTCATGACATACGAGACGCTGAAGAAACTTCTATCTGAAT
 
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rJMSF016A10+          CACCCTTCAACTAATGTCCAACTCACCCTTCAACTATGTCCAACTCATCTTTCAACAAAT
rJMSF050F12+          CACCCTTCAACTAATGTCCAACTCACCCTTCAACTATGTCCAACTCATCTTTCAACAAAT
                      ____________________________________________________________
consensus             CACCCTTCAACTAATGTCCAACTCACCCTTCAACTATGTCCAACTCATCTTTCAACAAAT
 
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rJMSF016A10+          GGTTTTACGGCTTACTCCCCATGCTGGAGAGGTCCTACAAGGATCAGTTTTGTCTTACAA
rJMSF050F12+          GGTTTTACGGCTTACTCCCCATGCTGGAGAGGTCCTACAAGGATCAGTTTTGTCTTACAA
                      ____________________________________________________________
consensus             GGTTTTACGGCTTACTCCCCATGCTGGAGAGGTCCTACAAGGATCAGTTTTGTCTTACAA
 
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rJMSF016A10+          AGCTTGCTAGTTAGAAAAGTTTAATAGGTAATTATAACTATCACGCGGTGGTAACTATTA
rJMSF050F12+          AGCTTGCTAGTTAGAAAAGTTTAATAGGTAATTATAACTATCACGCGGTGGTAACTATTA
                      ____________________________________________________________
consensus             AGCTTGCTAGTTAGAAAAGTTTAATAGGTAATTATAACTATCACGCGGTGGTAACTATTA
 
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rJMSF016A10+          CGGAGTATATGTTACCAACTAACTTTTGTTGTATAGACTATTAAAGTGTCAAGCGTGGTC
rJMSF050F12+          CGGAGTATATGTTACCAACTAACTTTTGTTGTATAGACTATTAAAGTGTCAAGCGTGGTC
                      ____________________________________________________________
consensus             CGGAGTATATGTTACCAACTAACTTTTGTTGTATAGACTATTAAAGTGTCAAGCGTGGTC
 
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rJMSF016A10+          TCACATCAAATGCATTTCTAGTTGAAATGTTGGTCCTGGATACCTTCTGCATTCGGCCCC
rJMSF050F12+          TCACATCAAATGCATTTCTAGTTGAAATGTTGGTCCTGGATACCTTCTGCATTCGGCCCC
                      ____________________________________________________________
consensus             TCACATCAAATGCATTTCTAGTTGAAATGTTGGTCCTGGATACCTTCTGCATTCGGCCCC
 
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rJMSF016A10+          GTTTATTTTGTTCCTGATTGCTGTATTATAGTATTTTGTTTTTCCTGAAGCTACTTTAGA
rJMSF050F12+          GTTTATTTTGTTCCTGATTGCTGTATTATAGTATTTTGTTTTTCCTGAAGCTACTTTAGA
                      ____________________________________________________________
consensus             GTTTATTTTGTTCCTGATTGCTGTATTATAGTATTTTGTTTTTCCTGAAGCTACTTTAGA
 
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rJMSF016A10+          CAAATTTTGTTAGGAGATCAATTTTCTTCAGCTTTGTATTGACAATGAAATTCTTCGATT
rJMSF050F12+          CAAATTTTGTTAGGAGATCAATTTTCTTCAGCTTTGTATTGACAATGAAATTCTTCGATT
                      ____________________________________________________________
consensus             CAAATTTTGTTAGGAGATCAATTTTCTTCAGCTTTGTATTGACAATGAAATTCTTCGATT