Contig 005832:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF052O13+                                                              CCAGGGGA
                      ____________________________________________________________
consensus                                                                 CCAGGGGA
 
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rJMSF052O13+          GNTAGTTGCCATCAAACGAGCTCAGCAGGGATCATTGCAGGGAGCATTAGAGTTCAAAAA
                      ____________________________________________________________
consensus             GNTAGTTGCCATCAAACGAGCTCAGCAGGGATCATTGCAGGGAGCATTAGAGTTCAAAAA
 
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rJMSF052O13+          CAGAAATTGAGCTTCTGTCCAGAATTCACCATAAGAATGTAGTCAACCTTGTGGGGTTCT
                      ____________________________________________________________
consensus             CAGAAATTGAGCTTCTGTCCAGAATTCACCATAAGAATGTAGTCAACCTTGTGGGGTTCT
 
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rJMSF052O13+          GTTATGAGCAAGGTGAACAAATGCTTGTTTATGAGTACATTCCAAATGGTACTCTAAGGG
                      ____________________________________________________________
consensus             GTTATGAGCAAGGTGAACAAATGCTTGTTTATGAGTACATTCCAAATGGTACTCTAAGGG
 
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rJMSF052O13+          AAAGCCTTTCAGGAAAGTCTGGTTTTCAATTAAATTGGACGAGGAGACTGAAAATAGCCC
rJMSF049J05+                                       TTAAATTGGACGAGGAGACTGAAAATAGCCC
                      ____________________________________________________________
consensus             AAAGCCTTTCAGGAAAGTCTGGTTTTCAATTAAATTGGACGAGGAGACTGAAAATAGCCC
 
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rJMSF052O13+          TTGATGCTGCCAGAGGGTTGGCTTATTTACACGAGCTCGCTGATCCTCCTATCATACACA
rJMSF049J05+          TTGATGCTGCCAGAGGGTTGGCTTATTTACACGAGCTCGCTGATCCTCCTATCATACACA
                      ____________________________________________________________
consensus             TTGATGCTGCCAGAGGGTTGGCTTATTTACACGAGCTCGCTGATCCTCCTATCATACACA
 
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rJMSF052O13+          GAGATGTTAAGTCCAGTAACATTTTGTTGGATGATAATTTGAATGCTGAAGTTGCAGATT
rJMSF049J05+          GAGATGTTAAGTCCAGTAACATTTTGTTGGATGATAATTTGAATGCTGAAGTTGCAGATT
                      ____________________________________________________________
consensus             GAGATGTTAAGTCCAGTAACATTTTGTTGGATGATAATTTGAATGCTGAAGTTGCAGATT
 
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rJMSF052O13+          TTGGCATTTCAAAACTTTTGGGAGATTCTGACAAGGGCCATGTCAGCACTCAAGTCAAAG
rJMSF049J05+          TTGGCATTTCAAAACTTTTGGGAGATTCTGACAAGGGCCATGTCAGCACTCAAGTCAAAG
                      ____________________________________________________________
consensus             TTGGCATTTCAAAACTTTTGGGAGATTCTGACAAGGGCCATGTCAGCACTCAAGTCAAAG
 
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rJMSF052O13+          GCACATTTGGATACCTCGACCCTGAATACTACATGACTCAGCAGCTAACAGATAGAAGCG
rJMSF049J05+          GCACATTTGGATACCTCGACCCTGAATACTACATGACTCAGCAGCTAACAGATAGAAGCG
                      ____________________________________________________________
consensus             GCACATTTGGATACCTCGACCCTGAATACTACATGACTCAGCAGCTAACAGATAGAAGCG
 
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rJMSF052O13+          ATGTATACAGCTTCGGAGTGGTCCTGTTGGAGCTCATAACTGCAAAACCTCCTATAGAAC
rJMSF049J05+          ATGTATACAGCTTCGGAGTGGTCCTGTTGGAGCTCATAACTGCAAAACCTCCTATAGAAC
                      ____________________________________________________________
consensus             ATGTATACAGCTTCGGAGTGGTCCTGTTGGAGCTCATAACTGCAAAACCTCCTATAGAAC
 
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rJMSF052O13+          GAGGAAACCATATAGTGAAAGTGGTGTCTGAAGCAATGGATGATCAAAGCAATAGTAGAA
rJMSF049J05+          GAGGAAACCATATAGTGAAAGTGGTGTCTGAAGCAATGGATGATCAAAGCAATAGTAGAA
                      ____________________________________________________________
consensus             GAGGAAACCATATAGTGAAAGTGGTGTCTGAAGCAATGGATGATCAAAGCAATAGTAGAA
 
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rJMSF052O13+          AACTTGATCAGGTGATAGATGTGATTCTCACACCTTGTACAAACCTTAAGGGCCTGCAGA
rJMSF049J05+          AACTTGATCAGGTGATAGATGTGATTCTCACACCTTGTACAAACCTTAAGGGCCTGCAGA
                      ____________________________________________________________
consensus             AACTTGATCAGGTGATAGATGTGATTCTCACACCTTGTACAAACCTTAAGGGCCTGCAGA
 
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rJMSF052O13+          AGTTTATGAACTTGGCCATGAGTTGTGTACGAGAATCTGCAGCGGAGAGGCCTTCAATGG
rJMSF049J05+          AGTTTATGAACTTGGCCATGAGTTGTGTACGAGAATCTGCAGCGGAGAGGCCTTCAATGG
                      ____________________________________________________________
consensus             AGTTTATGAACTTGGCCATGAGTTGTGTACGAGAATCTGCAGCGGAGAGGCCTTCAATGG
 
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rJMSF052O13+          GGGAGGTGGTGAGGGAGATTGAGAATATCATTCAGATGGCTGAGGAAGTACTATTCACTT
rJMSF049J05+          GGGAGGTGGTGAGGGAGATTGAGAATATCATTCAGATGGCTGAGGAAGTACTATTCACTT
                      ____________________________________________________________
consensus             GGGAGGTGGTGAGGGAGATTGAGAATATCATTCAGATGGCTGAGGAAGTACTATTCACTT
 
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rJMSF052O13+          CATCTTCTAGCTTTGATGGTATTGATGACAGTTGGAATAGTAACTTACTTTGACAAACAC
rJMSF049J05+          CATCTTCTAGCTTTGATGGTATTGATGACAGTTGGAATAGTAACTTACTTTGACAAACAC
                      ____________________________________________________________
consensus             CATCTTCTAGCTTTGATGGTATTGATGACAGTTGGAATAGTAACTTACTTTGACAAACAC
 
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rJMSF052O13+          TATGAACACAAAATCACTTTAATACATTCTCACACCCACACACAAATTGCAATTACATTT
rJMSF049J05+          TATGAACACAAAATCACTTTAATACATTCTCACACCCACACACAAATTGCAATTACATTT
                      ____________________________________________________________
consensus             TATGAACACAAAATCACTTTAATACATTCTCACACCCACACACAAATTGCAATTACATTT
 
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rJMSF052O13+          GTAATATAAACTAAA                                             
rJMSF049J05+          GTAATATAAACTAAATGTTTGAAATTTATATAGTTAATGGTTGCTTGAGGCCAGTTCAAG
                      ____________________________________________________________
consensus             GTAATATAAACTAAATGTTTGAAATTTATATAGTTAATGGTTGCTTGAGGCCAGTTCAAG