| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN033G10 | Sequence | 609 | 005829 (6) | ref|XP_009788725.1| | 1e-108 | PREDICTED: 60S ribosomal protein L7-2-like [Nicotiana sylvestris] | |||||
| JMSF009M04 | Sequence | 273 | 005829 (6) | ref|XP_009788725.1| | 8e-28 | PREDICTED: 60S ribosomal protein L7-2-like [Nicotiana sylvestris] | 755 | 005829 (6) | gb|EYU21221.1| | 2e-135 | hypothetical protein MIMGU_mgv1a012680mg [Erythranthe guttata] |
| JMSF049C08 | Sequence | 691 | 005829 (6) | ref|XP_009788725.1| | 7e-131 | PREDICTED: 60S ribosomal protein L7-2-like [Nicotiana sylvestris] | 760 | 005829 (6) | ref|XP_011077741.1| | 4e-129 | PREDICTED: 60S ribosomal protein L7-2-like [Sesamum indicum] ref|XP_011077742.1| |
| JMSF050C08 | Sequence | 680 | 009572 (2) | ref|XP_009798993.1| | 1e-42 | PREDICTED: beta-taxilin [Nicotiana sylvestris] | 222 | 005829 (6) | gb|EYU21221.1| | 9e-25 | hypothetical protein MIMGU_mgv1a012680mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
JMSF009M04- GAACCTTAGAACTCCATTATCG
JMFN033G10- TTAGAACTCCATTATCG
JMSF049C08- TTAGAACTCCATTATCG
____________________________________________________________
consensus GAACCTTAGAACTCCATTATCG
. : . : . : . : . : . :
JMSF009M04- TCTTCATTGTCAGCGAACGTTGCCGAGATCCAAGAGAAATGGTTGAGGAAGTCAAGACCA
JMFN033G10- TCTTCATTGTCAGCGAACGTTGCCGAGATCCAAGAGAAATGGTTGAGGAAGTCAAGACCA
JMSF049C08- TCTTCATTGTCAGCGAACGTTGCCGAGATCCAAGAGAAATGGTTGAGGAAGTCAAGACCA
____________________________________________________________
consensus TCTTCATTGTCAGCGAACGTTGCCGAGATCCAAGAGAAATGGTTGAGGAAGTCAAGACCA
. : . : . : . : . : . :
JMSF009M04- AGTTACCTGTCCCGGAATCAGTATTGAAGAAGCAGAAAAGGAATGAAGAATGGGCACTTG
JMFN033G10- AGTTACCTGTCCCGGAATCAGTATTGAAGAAGCAGAAAAGGAATGAAGAATGGGCACTTG
JMSF049C08- AGTTACCTGTCCCGGAATCAGTATTGAAGAAGCAGAAAAGGAATGAAGAATGGGCACTTG
____________________________________________________________
consensus AGTTACCTGTCCCGGAATCAGTATTGAAGAAGCAGAAAAGGAATGAAGAATGGGCACTTG
. : . : . : . : . : . :
JMSF009M04- CAAAAAAGCAGGAGCTCAATGCTGCAAAGAAGAAGAGTGCTGAGAACAGGAAGTTGATTT
JMFN033G10- CAAAAAAGCAGGAGCTCAATGCTGCAAAGAAGAAGAGTGCTGAGAACAGGAAGTTGATTT
JMSF049C08- CAAAAAAGCAGGAGCTCAATGCTGCAAAGAAGAAGAGTGCTGAGAACAGGAAGTTGATTT
rJMSF009M04+ CTGAGAACAGGAAGTTGATTT
____________________________________________________________
consensus CAAAAAAGCAGGAGCTCAATGCTGCAAAGAAGAAGAGTGCTGAGAACAGGAAGTTGATTT
. : . : . : . : . : . :
JMSF009M04- TCAACAGGGCCAAGCTGTACTCAAAGGAGTATGAGGAGCAGGAGAAAGAATTGATTCGTT
JMFN033G10- TCAACAGGGCCAAGCTGTACTCAAAGGAGTATGAGGAGCAGGAGAAAGAATTGATTCGTT
JMSF049C08- TCAACAGGGCCAAGCTGTACTCAAAGGAGTATGAGGAGCAGGAGAAAGAATTGATTCGTT
rJMSF009M04+ TCAACAGGGCCAAGCTGTACTCAAAGGAGTATGAGGAGCAGGAGAAAGAATTGATTCGTT
rJMSF049C08+ TCAAAGGAGTATGAGGAGCAGGAGAAAGAATTGATTCGTT
____________________________________________________________
consensus TCAACAGGGCCAAGCTGTACTCAAAGGAGTATGAGGAGCAGGAGAAAGAATTGATTCGTT
. : . : . : . : . : . :
JMSF009M04- TGAAGCGTGAG
JMFN033G10- TGAAGCGTGAGGCAAGGTTGAAAGGAGGGTTTTATGTTAACCCAGAGGCAAAGCTTTTGT
JMSF049C08- TGAAGCGTGAGGCAAGGTTGAAAGGAGGGTTTTATGTTAACCCAGAGGCAAAGCTTTTGT
rJMSF009M04+ TGAAGCGTGAGGCAAGGTTGAAAGGAGGGTTTTATGTTAACCCAGAGGCAAAGCTTTTGT
rJMSF049C08+ TGAAGCGTGAGGCAAGGTTGAAAGGAGGGTTTTATGTTAACCCAGAGGCAAAGCTTTTGT
____________________________________________________________
consensus TGAAGCGTGAGGCAAGGTTGAAAGGAGGGTTTTATGTTAACCCAGAGGCAAAGCTTTTGT
. : . : . : . : . : . :
JMFN033G10- TTATCATAAGAATTCGAGGGATTAATGCAATGCACCCAAGGACAAAAAAGATTCTGCAGC
JMSF049C08- TTATCATAAGAATTCGAGGGATTAATGCAATGCACCCAAGGACAAAAAAGATTCTGCAGC
rJMSF009M04+ TTATCATAAGAATTCGAGGGATTAATGCAATGCACCCAAGGACAAAAAAGATTCTGCAGC
rJMSF049C08+ TTATCATAAGAATTCGAGGGATTAATGCAATGCACCCAAGGACAAAAAAGATTCTGCAGC
____________________________________________________________
consensus TTATCATAAGAATTCGAGGGATTAATGCAATGCACCCAAGGACAAAAAAGATTCTGCAGC
. : . : . : . : . : . :
JMFN033G10- TTCTGCGTTTGCGCCAGATCTTTAATGGTGTATTTTTGAAAGTCAACAAGGCAACAATGA
JMSF049C08- TTCTGCGTTTGCGCCAGATCTTTAATGGTGTATTTTTGAAAGTCAACAAGGCAACAATGA
rJMSF009M04+ TTCTGCGTTTGCGCCAGATCTTTAATGGTGTATTTTTGAAAGTCAACAAGGCAACAATGA
rJMSF049C08+ TTCTGCGTTTGCGCCAGATCTTTAATGGTGTATTTTTGAAAGTCAACAAGGCAACAATGA
____________________________________________________________
consensus TTCTGCGTTTGCGCCAGATCTTTAATGGTGTATTTTTGAAAGTCAACAAGGCAACAATGA
. : . : . : . : . : . :
JMFN033G10- ACATGTTGCATCTAGTTGAACCCTATGTAACCTATGGTTATCCAAACCTGAAAAGTGTCA
JMSF049C08- ACATGTTGCATCTAGTTGAACCCTATGTAACCTATGGTTATCCAAACCTGAAAAGTGTCA
rJMSF009M04+ ACATGTTGCATCTAGTTGAACCCTATGTAACCTATGGTTATCCAAACCTGAAAAGTGTCA
rJMSF049C08+ ACATGTTGCATCTAGTTGAACCCTATGTAACCTATGGTTATCCAAACCTGAAAAGTGTCA
____________________________________________________________
consensus ACATGTTGCATCTAGTTGAACCCTATGTAACCTATGGTTATCCAAACCTGAAAAGTGTCA
. : . : . : . : . : . :
JMFN033G10- GAGAATTGATCTACAAGCGAGGTTATGGGAAATTGGACAAGCAGAGAATTCCTTTAACAG
JMSF049C08- GAGAATTGATCTACAAGCGAGGTTATGGGAAATTGGACAAGCAGAGAATTCCTTTAACAG
rJMSF009M04+ GAGAATTGATCTACAAGCGAGGTTATGGGAAATTGGACAAGCAGAGAATTCCTTTAACAG
rJMSF049C08+ GAGAATTGATCTACAAGCGAGGTTATGGGAAATTGGACAAGCAGAGAATTCCTTTAACAG
____________________________________________________________
consensus GAGAATTGATCTACAAGCGAGGTTATGGGAAATTGGACAAGCAGAGAATTCCTTTAACAG
. : . : . : . : . : . :
JMFN033G10- ACAACTCCATTATTGAGCAGGCTTTGGGGAAGCATGGAATTATCTGTGTTGA
JMSF049C08- ACAACTCCATTATTGAGCAGGCTTTGGGGAAGCATGGAATTATCTGTGTTGAAGATCTCA
rJMSF009M04+ ACAACTCCATTATTGAGCAGGCTTTGGGGAAGCATGGAATTATCTGTGTTGAAGATCTCA
rJMSF049C08+ ACAACTCCATTATTGAGCAGGCTTTGGGGAAGCATGGAATTATCTGTGTTGAAGATCTCA
____________________________________________________________
consensus ACAACTCCATTATTGAGCAGGCTTTGGGGAAGCATGGAATTATCTGTGTTGAAGATCTCA
. : . : . : . : . : . :
JMSF049C08- TCCACGAGATACTCACTGTTGGACCCCACTTCAAGGAGGCAAACAACTTCTTGTGGCCAT
rJMSF050C08+ TCACTGTTGGACCCCACTTCAAGGAGGCAAACAACTTCTNGTGGCCAT
rJMSF009M04+ TCCACGAGATACTCACTGTTGGACCCCACTTCAAGGAGGCAAACAACTTCTTGTGGCCAT
rJMSF049C08+ TCCACGAGATACTCACTGTTGGACCCCACTTCAAGGAGGCAAACAACTTCTTGTGGCCAT
____________________________________________________________
consensus TCCACGAGATACTCACTGTTGGACCCCACTTCAAGGAGGCAAACAACTTCTTGTGGCCAT
. : . : . : . : . : . :
JMSF049C08- TCCAGCTCA
rJMSF050C08+ TCCAGCTCAAGGCNCCGTTGGGTGGACTGAAGAAGAAGAGGAACCNTTATGTTGAAGGTG
rJMSF009M04+ TCCAGCTCAAGGCACCGTTGGGTGGACTGAAGAAGAAGAGGAACCATTATGTTGAAGGTG
rJMSF049C08+ TCCAGCTCAAGGCACCGTTGGGTGGACTGAAGAAGAAGAGGAACCATTATGTTGAAGGTG
____________________________________________________________
consensus TCCAGCTCAAGGCACCGTTGGGTGGACTGAAGAAGAAGAGGAACCATTATGTTGAAGGTG
. : . : . : . : . : . :
rJMSF050C08+ GAGATGCAGGCAATCGTGAGGATTTCATCAATGAGCTCNTCAGGNGGANGAACTGATCCC
rJMSF009M04+ GAGATGCAGGCAATCGTGAGGATTTCATCAATGAGCTCATCAGGAGGATGAACTGATCCC
rJMSF049C08+ GAGATGCAGGCAATCGTGAGGATTTCATCAATGAGCTCATCAGGAGGATGAACTGATCCC
____________________________________________________________
consensus GAGATGCAGGCAATCGTGAGGATTTCATCAATGAGCTCATCAGGAGGATGAACTGATCCC
. : . : . : . : . : . :
rJMSF050C08+ AACCCAGTTTTNTTACATAAGTACTNGAATTNGGTTGTTACCCATAGAAG
rJMSF009M04+ AACCCAGTTTTGTTACATAAGTACTCGAATTTGGTTGTTACCCATAGAAGATCCTTTACT
rJMSF049C08+ AACCCAGTTTTGTTACATAAGTACTCGAATTTGGTTGTTACCCATAGAAGATCCTTTACT
____________________________________________________________
consensus AACCCAGTTTTGTTACATAAGTACTCGAATTTGGTTGTTACCCATAGAAGATCCTTTACT
. : . : . : . : . : . :
rJMSF009M04+ GTTTAGTTCTGAAGCTATCGAGTATCTTCATTTTGTTCAAGAATCAAGACTATGCTGTCA
rJMSF049C08+ GTTTAGTTCTGAAGCTATCGAGTATCTTCATTTTGTTCAAGAATCAAGACTATGCTGTCA
____________________________________________________________
consensus GTTTAGTTCTGAAGCTATCGAGTATCTTCATTTTGTTCAAGAATCAAGACTATGCTGTCA
. : . : . : . : . : . :
rJMSF009M04+ AATATTAAGTGCTT
rJMSF049C08+ AATATTAAGTGCTTATTTTGTCAGGCTTGCAACCTGAAAAGATTACTTGGAGTAGAAATT
____________________________________________________________
consensus AATATTAAGTGCTTATTTTGTCAGGCTTGCAACCTGAAAAGATTACTTGGAGTAGAAATT