Contig 005827:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF037P08Sequence658009557 (3)ref|XP_009796826.1|2e-72PREDICTED: alpha-L-arabinofuranosidase 1-like [Nicotiana sylvestris]678005827 (5)ref|XP_011070044.1|9e-82PREDICTED: alpha-L-arabinofuranosidase 1-like [Sesamum indicum]
JMSF041N02Sequence737009557 (3)ref|XP_009796826.1|4e-71PREDICTED: alpha-L-arabinofuranosidase 1-like [Nicotiana sylvestris]581005827 (5)ref|XP_009625148.1|4e-74PREDICTED: alpha-L-arabinofuranosidase 1 [Nicotiana tomentosiformis]
JMSF047E16Sequence725005827 (5)ref|XP_010251797.1|9e-134PREDICTED: alpha-L-arabinofuranosidase 1-like [Nelumbo nucifera]731005827 (5)ref|XP_011070044.1|2e-89PREDICTED: alpha-L-arabinofuranosidase 1-like [Sesamum indicum]
JMSF048K22Sequence702009557 (3)756005827 (5)ref|XP_011070044.1|6e-96PREDICTED: alpha-L-arabinofuranosidase 1-like [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF047E16- GTGATGT
                      ____________________________________________________________
consensus GTGATGT
 
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JMSF047E16- TTGGAAATATTGGACTGATGATGGACTAGGGCATCTTGAGTTCCTTCAGCTTGCAGAGGA
                      ____________________________________________________________
consensus TTGGAAATATTGGACTGATGATGGACTAGGGCATCTTGAGTTCCTTCAGCTTGCAGAGGA
 
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JMSF047E16- CTTGGGCGCACTGCCTGTATGGGTATTTAACAATGGAATCAGCCACCAGGACCAGGTTGA
                      ____________________________________________________________
consensus CTTGGGCGCACTGCCTGTATGGGTATTTAACAATGGAATCAGCCACCAGGACCAGGTTGA
 
. : . : . : . : . : . :
JMSF047E16- TACATCACTCATTTCGCCTTTTCTGCAAGAAATCTTAGATGGTATTGAGTTTGCCCGAGG
                      ____________________________________________________________
consensus TACATCACTCATTTCGCCTTTTCTGCAAGAAATCTTAGATGGTATTGAGTTTGCCCGAGG
 
. : . : . : . : . : . :
JMSF047E16- TGATCCCAACTCAACATGGGGTTCTGTTCGAGCTGCATTGGGTCACCCAGAACCCTTCGA
                      ____________________________________________________________
consensus TGATCCCAACTCAACATGGGGTTCTGTTCGAGCTGCATTGGGTCACCCAGAACCCTTCGA
 
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JMSF047E16- TTTGAGATATGTTGCAATTGGAAATGAAGATTGTTGGAAGTCAAAATACCAAGGAAATTA
                      ____________________________________________________________
consensus TTTGAGATATGTTGCAATTGGAAATGAAGATTGTTGGAAGTCAAAATACCAAGGAAATTA
 
. : . : . : . : . : . :
JMSF047E16- CCTCAAGTTTCACGCTGCAATTAAACAAGCTTATCCAGATATTAATATAATTTCGAACTG
                      ____________________________________________________________
consensus CCTCAAGTTTCACGCTGCAATTAAACAAGCTTATCCAGATATTAATATAATTTCGAACTG
 
. : . : . : . : . : . :
JMSF047E16- TGACGGGTCTTCCAAACCATTGAATCATCCGGCTGATTTATATGATTTTCATATTTATAG
rJMSF047E16+ TCATATTTATAG
rJMSF048K22+ TCATCCGGCTGATTTATATGATTTTCATATTTATAG
                      ____________________________________________________________
consensus TGACGGGTCTTCCAAACCATTGAATCATCCGGCTGATTTATATGATTTTCATATTTATAG
 
. : . : . : . : . : . :
JMSF047E16- CTCTGCAAGTGACGTGTTTTCTTTGAATACAAAATTTGACCATGTATCACGGAGTGGTCC
rJMSF047E16+ CTCTGCAAGTGACGTGTTTTCTTTGAATACAAAATTTGACCATGTATCACGGAGTGGTCC
rJMSF037P08+ TGTATCACGGAGTGGTCC
rJMSF048K22+ CTCTGCAAGTGACGTGTTTTCTTTGAATACAAAATTTGACCATGTATCACGGAGTGGTCC
                      ____________________________________________________________
consensus CTCTGCAAGTGACGTGTTTTCTTTGAATACAAAATTTGACCATGTATCACGGAGTGGTCC
 
. : . : . : . : . : . :
JMSF047E16- AAAGGCTTTTATAAGTGAATATGCTGTGACTGAGAGGAAAGATTGCGGGACAGGTAGCCT
rJMSF041N02+ TATAAGTGAATATGCTGTGACTGAGAGGAAAGATTGCGGGACAGGTAGCCT
rJMSF047E16+ AAAGGCTTTTATAAGTGAATATGCTGTGACTGAGAGGAAAGATTGCGGGACAGGTAGCCT
rJMSF037P08+ AAAGGCTTTTATAAGTGAATATGCTGTGACTGAGAGGAAAGATTGCGGGACAGGTAGCCT
rJMSF048K22+ AAAGGCTTTTATAAGTGAATATGCTGTGACTGAGAGGAAAGATTGCGGGACAGGTAGCCT
                      ____________________________________________________________
consensus AAAGGCTTTTATAAGTGAATATGCTGTGACTGAGAGGAAAGATTGCGGGACAGGTAGCCT
 
. : . : . : . : . : . :
JMSF047E16- TTTAGCTGCAGTGGCTGAAGCTGGATTCCTTATCGGGGTTGAAAGGAACAGTGACGCAAT
rJMSF041N02+ TTTAGCTGCAGTGGCTGAAGCTGGATTCCTTATCGGGGTTGAAAGGAACAGTGACGCAAT
rJMSF047E16+ TTTAGCTGCAGTGGCTGAAGCTGGATTCCTTATCGGGGTTGAAAGGAACAGTGACGCAAT
rJMSF037P08+ TTTAGCTGCAGTGGCTGAAGCTGGATTCCTTATCGGGGTTGAAAGGAACAGTGACGCAAT
rJMSF048K22+ TTTAGCTGCAGTGGCTGAAGCTGGATTCCTTATCGGGGTTGAAAGGAACAGTGACGCAAT
                      ____________________________________________________________
consensus TTTAGCTGCAGTGGCTGAAGCTGGATTCCTTATCGGGGTTGAAAGGAACAGTGACGCAAT
 
. : . : . : . : . : . :
JMSF047E16- TGAAATGGCAAGTTACGCACCTCTATTTGTGAATGTCAATGACAGGTGGTGGAACCCGGA
rJMSF041N02+ TGAAATGGCAAGTTACGCACCTCTATTTGTGAATGTCAATGACAGGTGGTGGAACCCGGA
rJMSF047E16+ TGAAATGGCAAGTTACGCACCTCTATTTGTGAATGTCAATGACAGGTGGTGGAACCCGGA
rJMSF037P08+ TGAAATGGCAAGTTACGCACCTCTATTTGTGAATGTCAATGACAGGTGGTGGAACCCGGA
rJMSF048K22+ TGAAATGGCAAGTTACGCACCTCTATTTGTGAATGTCAATGACAGGTGGTGGAACCCGGA
                      ____________________________________________________________
consensus TGAAATGGCAAGTTACGCACCTCTATTTGTGAATGTCAATGACAGGTGGTGGAACCCGGA
 
. : . : . : . : . : . :
JMSF047E16- TGCAATCGTTTTCTCTTCTTCTCAGCACTATGGAACTCCGAGTT
rJMSF041N02+ TGCAATCGTTTTCTCTTCTTCTCAGCACTATGGAACTCCGAGTTACTGGATGCAGCACTT
rJMSF047E16+ TGCAATCGTTTTCTCTTCTTCTCAGCACTATGGAACTCCGAGTTACTGGATGCAGCACTT
rJMSF037P08+ TGCAATCGTTTTCTCTTCTTCTCAGCACTATGGAACTCCGAGTTACTGGATGCAGCACTT
rJMSF048K22+ TGCAATCGTTTTCTCTTCTTCTCAGCACTATGGAACTCCGAGTTACTGGATGCAGCACTT
                      ____________________________________________________________
consensus TGCAATCGTTTTCTCTTCTTCTCAGCACTATGGAACTCCGAGTTACTGGATGCAGCACTT
 
. : . : . : . : . : . :
rJMSF041N02+ TTTCAGAGAGTCGAACGGGGCAACTCTGTTGAGCTCTACACTCCAATCTAATATTTCAAG
rJMSF047E16+ TTTCAGAGAGTCGAACGGGGCAACTCTGTTGAGCTCTACACTCCAATCTAATATTTCAAG
rJMSF037P08+ TTTCAGAGAGTCGAACGGGGCAACTCTGTTGAGCTCTACACTCCAATCTAATATTTCAAG
rJMSF048K22+ TTTCAGAGAGTCGAACGGGGCAACTCTGTTGAGCTCTACACTCCAATCTAATATTTCAAG
                      ____________________________________________________________
consensus TTTCAGAGAGTCGAACGGGGCAACTCTGTTGAGCTCTACACTCCAATCTAATATTTCAAG
 
. : . : . : . : . : . :
rJMSF041N02+ TTCACTCGTCACGTCTGCTATCACTTGGAAAAACTCCGAGGATAACCAGGAGTATTTGAG
rJMSF047E16+ TTCACTCGTCACGTCTGCTATCACTTGGAAAAACTCCGAGGATAACCAGGAGTATTTGAG
rJMSF037P08+ TTCACTCGTCACGTCTGCTATCACTTGGAAAAACTCCGAGGATAACCAGGAGTATTTGAG
rJMSF048K22+ TTCACTCGTCACGTCTGCTATCACTTGGAAAAACTCCGAGGATAACCAGGAGTATTTGAG
                      ____________________________________________________________
consensus TTCACTCGTCACGTCTGCTATCACTTGGAAAAACTCCGAGGATAACCAGGAGTATTTGAG
 
. : . : . : . : . : . :
rJMSF041N02+ AATAAAGGCCGTTAACTTCGGGGCCAAAAATGTGACACTTACAATCACCGTCCATGGTTT
rJMSF047E16+ AATAAAGGCCGTTAACTTCGGGGCCAAAAATGTGACACTTACAATCACCGTCCATGGTTT
rJMSF037P08+ AATAAAGGCCGTTAACTTCGGGGCCAAAAATGTGACACTTACAATCACCGTCCATGGTTT
rJMSF048K22+ AATAAAGGCCGTTAACTTCGGGGCCAAAAATGTGACACTTACAATCACCGTCCATGGTTT
                      ____________________________________________________________
consensus AATAAAGGCCGTTAACTTCGGGGCCAAAAATGTGACACTTACAATCACCGTCCATGGTTT
 
. : . : . : . : . : . :
rJMSF041N02+ CGAGCAGAACTCCATACAGTTATTGGGGAATGCGATAACTGTGTTAACCTCTAGTAACGT
rJMSF047E16+ CGAGCAGAACTCCATACAGTTATTGGGGAATGCGATAACTGTGTTAACCTCTAGTAACGT
rJMSF037P08+ CGAGCAGAACTCCATACAGTTATTGGGGAATGCGATAACTGTGTTAACCTCTAGTAACGT
rJMSF048K22+ CGAGCAGAACTCCATACAGTTATTGGGGAATGCGATAACTGTGTTAACCTCTAGTAACGT
                      ____________________________________________________________
consensus CGAGCAGAACTCCATACAGTTATTGGGGAATGCGATAACTGTGTTAACCTCTAGTAACGT
 
. : . : . : . : . : . :
rJMSF041N02+ GATGGACGAGAACTCCTTCAACAAGCCTACAAAGGTGGCACCCATTGAAACCAAACTACA
rJMSF047E16+ GATGGACGAGAACTCCTTCAACAAGCCTACAAAGGTGGCACCCATTGAAACCAAACTACA
rJMSF037P08+ GATGGACGAGAACTCCTTCAACAAGCCTACAAAGGTGGCACCCATTGAAACCAAACTACA
rJMSF048K22+ GATGGACGAGAACTCCTTCAACAAGCCTACAAAGGTGGCACCCATTGAAACCAAACTACA
                      ____________________________________________________________
consensus GATGGACGAGAACTCCTTCAACAAGCCTACAAAGGTGGCACCCATTGAAACCAAACTACA
 
. : . : . : . : . : . :
rJMSF041N02+ AGGAGTTGAGAAGATGGATGCTGTAATGCTGCCTC
rJMSF047E16+ AGGAGTTGAGAAGATGGATGCTGTAATGCTGCCTCCATATTCCATCACTGCAGTGGACTT
rJMSF037P08+ AGGAGTTGAGAAGATGGATGCTGTAATGCTGCCTCCATATTCCATCACTGCAGTGGACTT
rJMSF048K22+ AGGAGTTGAGAAGATGGATGCTGTAATGCTGCCTCCATATTCCATCACTGCAGTGGACTT
                      ____________________________________________________________
consensus AGGAGTTGAGAAGATGGATGCTGTAATGCTGCCTCCATATTCCATCACTGCAGTGGACTT
 
. : . : . : . : . : . :
rJMSF047E16+ CTTACTAAAACCAGCCAATATCAGGCCTGTTGGATCTGATTCTGCCCTAAAATCTTCAT
rJMSF037P08+ CTTACTAAAACCAGCCAATATCAGGCCTGTTGGATCTGATTCTGCCCTAAAATCTTCAT
rJMSF048K22+ CTTACTAAAACCAGCCAATATCAGGCCTGTTGGATCTGATTCTGCCCTAAAATCTTCATA
                      ____________________________________________________________
consensus CTTACTAAAACCAGCCAATATCAGGCCTGTTGGATCTGATTCTGCCCTAAAATCTTCATA