clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF037P08 | Sequence | 658 | 009557 (3) | ref|XP_009796826.1| | 2e-72 | PREDICTED: alpha-L-arabinofuranosidase 1-like [Nicotiana sylvestris] | 678 | 005827 (5) | ref|XP_011070044.1| | 9e-82 | PREDICTED: alpha-L-arabinofuranosidase 1-like [Sesamum indicum] |
JMSF041N02 | Sequence | 737 | 009557 (3) | ref|XP_009796826.1| | 4e-71 | PREDICTED: alpha-L-arabinofuranosidase 1-like [Nicotiana sylvestris] | 581 | 005827 (5) | ref|XP_009625148.1| | 4e-74 | PREDICTED: alpha-L-arabinofuranosidase 1 [Nicotiana tomentosiformis] |
JMSF047E16 | Sequence | 725 | 005827 (5) | ref|XP_010251797.1| | 9e-134 | PREDICTED: alpha-L-arabinofuranosidase 1-like [Nelumbo nucifera] | 731 | 005827 (5) | ref|XP_011070044.1| | 2e-89 | PREDICTED: alpha-L-arabinofuranosidase 1-like [Sesamum indicum] |
JMSF048K22 | Sequence | 702 | 009557 (3) | 756 | 005827 (5) | ref|XP_011070044.1| | 6e-96 | PREDICTED: alpha-L-arabinofuranosidase 1-like [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMSF047E16- GTGATGT
____________________________________________________________
consensus GTGATGT
. : . : . : . : . : . :
JMSF047E16- TTGGAAATATTGGACTGATGATGGACTAGGGCATCTTGAGTTCCTTCAGCTTGCAGAGGA
____________________________________________________________
consensus TTGGAAATATTGGACTGATGATGGACTAGGGCATCTTGAGTTCCTTCAGCTTGCAGAGGA
. : . : . : . : . : . :
JMSF047E16- CTTGGGCGCACTGCCTGTATGGGTATTTAACAATGGAATCAGCCACCAGGACCAGGTTGA
____________________________________________________________
consensus CTTGGGCGCACTGCCTGTATGGGTATTTAACAATGGAATCAGCCACCAGGACCAGGTTGA
. : . : . : . : . : . :
JMSF047E16- TACATCACTCATTTCGCCTTTTCTGCAAGAAATCTTAGATGGTATTGAGTTTGCCCGAGG
____________________________________________________________
consensus TACATCACTCATTTCGCCTTTTCTGCAAGAAATCTTAGATGGTATTGAGTTTGCCCGAGG
. : . : . : . : . : . :
JMSF047E16- TGATCCCAACTCAACATGGGGTTCTGTTCGAGCTGCATTGGGTCACCCAGAACCCTTCGA
____________________________________________________________
consensus TGATCCCAACTCAACATGGGGTTCTGTTCGAGCTGCATTGGGTCACCCAGAACCCTTCGA
. : . : . : . : . : . :
JMSF047E16- TTTGAGATATGTTGCAATTGGAAATGAAGATTGTTGGAAGTCAAAATACCAAGGAAATTA
____________________________________________________________
consensus TTTGAGATATGTTGCAATTGGAAATGAAGATTGTTGGAAGTCAAAATACCAAGGAAATTA
. : . : . : . : . : . :
JMSF047E16- CCTCAAGTTTCACGCTGCAATTAAACAAGCTTATCCAGATATTAATATAATTTCGAACTG
____________________________________________________________
consensus CCTCAAGTTTCACGCTGCAATTAAACAAGCTTATCCAGATATTAATATAATTTCGAACTG
. : . : . : . : . : . :
JMSF047E16- TGACGGGTCTTCCAAACCATTGAATCATCCGGCTGATTTATATGATTTTCATATTTATAG
rJMSF047E16+ TCATATTTATAG
rJMSF048K22+ TCATCCGGCTGATTTATATGATTTTCATATTTATAG
____________________________________________________________
consensus TGACGGGTCTTCCAAACCATTGAATCATCCGGCTGATTTATATGATTTTCATATTTATAG
. : . : . : . : . : . :
JMSF047E16- CTCTGCAAGTGACGTGTTTTCTTTGAATACAAAATTTGACCATGTATCACGGAGTGGTCC
rJMSF047E16+ CTCTGCAAGTGACGTGTTTTCTTTGAATACAAAATTTGACCATGTATCACGGAGTGGTCC
rJMSF037P08+ TGTATCACGGAGTGGTCC
rJMSF048K22+ CTCTGCAAGTGACGTGTTTTCTTTGAATACAAAATTTGACCATGTATCACGGAGTGGTCC
____________________________________________________________
consensus CTCTGCAAGTGACGTGTTTTCTTTGAATACAAAATTTGACCATGTATCACGGAGTGGTCC
. : . : . : . : . : . :
JMSF047E16- AAAGGCTTTTATAAGTGAATATGCTGTGACTGAGAGGAAAGATTGCGGGACAGGTAGCCT
rJMSF041N02+ TATAAGTGAATATGCTGTGACTGAGAGGAAAGATTGCGGGACAGGTAGCCT
rJMSF047E16+ AAAGGCTTTTATAAGTGAATATGCTGTGACTGAGAGGAAAGATTGCGGGACAGGTAGCCT
rJMSF037P08+ AAAGGCTTTTATAAGTGAATATGCTGTGACTGAGAGGAAAGATTGCGGGACAGGTAGCCT
rJMSF048K22+ AAAGGCTTTTATAAGTGAATATGCTGTGACTGAGAGGAAAGATTGCGGGACAGGTAGCCT
____________________________________________________________
consensus AAAGGCTTTTATAAGTGAATATGCTGTGACTGAGAGGAAAGATTGCGGGACAGGTAGCCT
. : . : . : . : . : . :
JMSF047E16- TTTAGCTGCAGTGGCTGAAGCTGGATTCCTTATCGGGGTTGAAAGGAACAGTGACGCAAT
rJMSF041N02+ TTTAGCTGCAGTGGCTGAAGCTGGATTCCTTATCGGGGTTGAAAGGAACAGTGACGCAAT
rJMSF047E16+ TTTAGCTGCAGTGGCTGAAGCTGGATTCCTTATCGGGGTTGAAAGGAACAGTGACGCAAT
rJMSF037P08+ TTTAGCTGCAGTGGCTGAAGCTGGATTCCTTATCGGGGTTGAAAGGAACAGTGACGCAAT
rJMSF048K22+ TTTAGCTGCAGTGGCTGAAGCTGGATTCCTTATCGGGGTTGAAAGGAACAGTGACGCAAT
____________________________________________________________
consensus TTTAGCTGCAGTGGCTGAAGCTGGATTCCTTATCGGGGTTGAAAGGAACAGTGACGCAAT
. : . : . : . : . : . :
JMSF047E16- TGAAATGGCAAGTTACGCACCTCTATTTGTGAATGTCAATGACAGGTGGTGGAACCCGGA
rJMSF041N02+ TGAAATGGCAAGTTACGCACCTCTATTTGTGAATGTCAATGACAGGTGGTGGAACCCGGA
rJMSF047E16+ TGAAATGGCAAGTTACGCACCTCTATTTGTGAATGTCAATGACAGGTGGTGGAACCCGGA
rJMSF037P08+ TGAAATGGCAAGTTACGCACCTCTATTTGTGAATGTCAATGACAGGTGGTGGAACCCGGA
rJMSF048K22+ TGAAATGGCAAGTTACGCACCTCTATTTGTGAATGTCAATGACAGGTGGTGGAACCCGGA
____________________________________________________________
consensus TGAAATGGCAAGTTACGCACCTCTATTTGTGAATGTCAATGACAGGTGGTGGAACCCGGA
. : . : . : . : . : . :
JMSF047E16- TGCAATCGTTTTCTCTTCTTCTCAGCACTATGGAACTCCGAGTT
rJMSF041N02+ TGCAATCGTTTTCTCTTCTTCTCAGCACTATGGAACTCCGAGTTACTGGATGCAGCACTT
rJMSF047E16+ TGCAATCGTTTTCTCTTCTTCTCAGCACTATGGAACTCCGAGTTACTGGATGCAGCACTT
rJMSF037P08+ TGCAATCGTTTTCTCTTCTTCTCAGCACTATGGAACTCCGAGTTACTGGATGCAGCACTT
rJMSF048K22+ TGCAATCGTTTTCTCTTCTTCTCAGCACTATGGAACTCCGAGTTACTGGATGCAGCACTT
____________________________________________________________
consensus TGCAATCGTTTTCTCTTCTTCTCAGCACTATGGAACTCCGAGTTACTGGATGCAGCACTT
. : . : . : . : . : . :
rJMSF041N02+ TTTCAGAGAGTCGAACGGGGCAACTCTGTTGAGCTCTACACTCCAATCTAATATTTCAAG
rJMSF047E16+ TTTCAGAGAGTCGAACGGGGCAACTCTGTTGAGCTCTACACTCCAATCTAATATTTCAAG
rJMSF037P08+ TTTCAGAGAGTCGAACGGGGCAACTCTGTTGAGCTCTACACTCCAATCTAATATTTCAAG
rJMSF048K22+ TTTCAGAGAGTCGAACGGGGCAACTCTGTTGAGCTCTACACTCCAATCTAATATTTCAAG
____________________________________________________________
consensus TTTCAGAGAGTCGAACGGGGCAACTCTGTTGAGCTCTACACTCCAATCTAATATTTCAAG
. : . : . : . : . : . :
rJMSF041N02+ TTCACTCGTCACGTCTGCTATCACTTGGAAAAACTCCGAGGATAACCAGGAGTATTTGAG
rJMSF047E16+ TTCACTCGTCACGTCTGCTATCACTTGGAAAAACTCCGAGGATAACCAGGAGTATTTGAG
rJMSF037P08+ TTCACTCGTCACGTCTGCTATCACTTGGAAAAACTCCGAGGATAACCAGGAGTATTTGAG
rJMSF048K22+ TTCACTCGTCACGTCTGCTATCACTTGGAAAAACTCCGAGGATAACCAGGAGTATTTGAG
____________________________________________________________
consensus TTCACTCGTCACGTCTGCTATCACTTGGAAAAACTCCGAGGATAACCAGGAGTATTTGAG
. : . : . : . : . : . :
rJMSF041N02+ AATAAAGGCCGTTAACTTCGGGGCCAAAAATGTGACACTTACAATCACCGTCCATGGTTT
rJMSF047E16+ AATAAAGGCCGTTAACTTCGGGGCCAAAAATGTGACACTTACAATCACCGTCCATGGTTT
rJMSF037P08+ AATAAAGGCCGTTAACTTCGGGGCCAAAAATGTGACACTTACAATCACCGTCCATGGTTT
rJMSF048K22+ AATAAAGGCCGTTAACTTCGGGGCCAAAAATGTGACACTTACAATCACCGTCCATGGTTT
____________________________________________________________
consensus AATAAAGGCCGTTAACTTCGGGGCCAAAAATGTGACACTTACAATCACCGTCCATGGTTT
. : . : . : . : . : . :
rJMSF041N02+ CGAGCAGAACTCCATACAGTTATTGGGGAATGCGATAACTGTGTTAACCTCTAGTAACGT
rJMSF047E16+ CGAGCAGAACTCCATACAGTTATTGGGGAATGCGATAACTGTGTTAACCTCTAGTAACGT
rJMSF037P08+ CGAGCAGAACTCCATACAGTTATTGGGGAATGCGATAACTGTGTTAACCTCTAGTAACGT
rJMSF048K22+ CGAGCAGAACTCCATACAGTTATTGGGGAATGCGATAACTGTGTTAACCTCTAGTAACGT
____________________________________________________________
consensus CGAGCAGAACTCCATACAGTTATTGGGGAATGCGATAACTGTGTTAACCTCTAGTAACGT
. : . : . : . : . : . :
rJMSF041N02+ GATGGACGAGAACTCCTTCAACAAGCCTACAAAGGTGGCACCCATTGAAACCAAACTACA
rJMSF047E16+ GATGGACGAGAACTCCTTCAACAAGCCTACAAAGGTGGCACCCATTGAAACCAAACTACA
rJMSF037P08+ GATGGACGAGAACTCCTTCAACAAGCCTACAAAGGTGGCACCCATTGAAACCAAACTACA
rJMSF048K22+ GATGGACGAGAACTCCTTCAACAAGCCTACAAAGGTGGCACCCATTGAAACCAAACTACA
____________________________________________________________
consensus GATGGACGAGAACTCCTTCAACAAGCCTACAAAGGTGGCACCCATTGAAACCAAACTACA
. : . : . : . : . : . :
rJMSF041N02+ AGGAGTTGAGAAGATGGATGCTGTAATGCTGCCTC
rJMSF047E16+ AGGAGTTGAGAAGATGGATGCTGTAATGCTGCCTCCATATTCCATCACTGCAGTGGACTT
rJMSF037P08+ AGGAGTTGAGAAGATGGATGCTGTAATGCTGCCTCCATATTCCATCACTGCAGTGGACTT
rJMSF048K22+ AGGAGTTGAGAAGATGGATGCTGTAATGCTGCCTCCATATTCCATCACTGCAGTGGACTT
____________________________________________________________
consensus AGGAGTTGAGAAGATGGATGCTGTAATGCTGCCTCCATATTCCATCACTGCAGTGGACTT
. : . : . : . : . : . :
rJMSF047E16+ CTTACTAAAACCAGCCAATATCAGGCCTGTTGGATCTGATTCTGCCCTAAAATCTTCAT
rJMSF037P08+ CTTACTAAAACCAGCCAATATCAGGCCTGTTGGATCTGATTCTGCCCTAAAATCTTCAT
rJMSF048K22+ CTTACTAAAACCAGCCAATATCAGGCCTGTTGGATCTGATTCTGCCCTAAAATCTTCATA
____________________________________________________________
consensus CTTACTAAAACCAGCCAATATCAGGCCTGTTGGATCTGATTCTGCCCTAAAATCTTCATA