Contig 005819:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF046P01Sequence722005819 (3)ref|XP_009781550.1|280PREDICTED: uncharacterized protein LOC104230432 [Nicotiana sylvestris]663005819 (3)ref|XP_009596178.1|196PREDICTED: uncharacterized protein LOC104092313 [Nicotiana tomentosiformis]
JMSF051M02Sequence639002167 (43)gb|KDO42919.1|1e-77hypothetical protein CISIN_1g0225291mg, partial [Citrus sinensis]621005819 (3)ref|XP_009596178.1|196PREDICTED: uncharacterized protein LOC104092313 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF046P01-                                              GCACTATCTTCTATCTACCCCAGCA
                      ____________________________________________________________
consensus                                                GCACTATCTTCTATCTACCCCAGCA
 
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JMSF046P01-           AATTATTTTATTCACCGGAAAAAATGGTGCTGTCCGACGGCCGGCAGGTGTACCAGAACG
                      ____________________________________________________________
consensus             AATTATTTTATTCACCGGAAAAAATGGTGCTGTCCGACGGCCGGCAGGTGTACCAGAACG
 
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JMSF046P01-           TGGTTGTAATGAGGCACGGCCCCCGCCTCGATAACTTCGACAAGCTCTGGGCTGCCACGG
                      ____________________________________________________________
consensus             TGGTTGTAATGAGGCACGGCCCCCGCCTCGATAACTTCGACAAGCTCTGGGCTGCCACGG
 
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JMSF046P01-           CGGACCGGCCCTGGGACCCGCCGCTTTACAGCCCAGGCAAGAGCCTGGCTTTCGACGCCG
                      ____________________________________________________________
consensus             CGGACCGGCCCTGGGACCCGCCGCTTTACAGCCCAGGCAAGAGCCTGGCTTTCGACGCCG
 
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JMSF046P01-           GGAAGAAGATCCGGGAAGAGCTCGGAGCTCCGATCCACAGGATCTTCGTCTCCCCTTTCC
rJMSF051M02+                                                                  TTCC
rJMSF046P01+                                                                  TTCC
                      ____________________________________________________________
consensus             GGAAGAAGATCCGGGAAGAGCTCGGAGCTCCGATCCACAGGATCTTCGTCTCCCCTTTCC
 
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JMSF046P01-           TCCGGTGCCTTCAGACTGCGTCTGAGACTATCAGAGCCCTCTCCGATGACTCCGATACCG
rJMSF051M02+          TCCGGTGCCTTCAGACTGCGTCTGAGACTATCAGAGCCCTCTCCGATGACTCCGATACCG
rJMSF046P01+          TCCGGTGCCTTCAGACTGCGTCTGAGACTATCAGAGCCCTCTCCGATGACTCCGATACCG
                      ____________________________________________________________
consensus             TCCGGTGCCTTCAGACTGCGTCTGAGACTATCAGAGCCCTCTCCGATGACTCCGATACCG
 
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JMSF046P01-           CCGTCAATCCTCCCAAAATCAAGGTTTCTGTTGAGTTTGGATTGTCAGAGATGTTGAACA
rJMSF051M02+          CCGTCAATCCTCCCAAAATCAAGGTTTCTGTTGAGTTTGGATTGTCAGAGATGTTGAACA
rJMSF046P01+          CCGTCAATCCTCCCAAAATCAAGGTTTCTGTTGAGTTTGGATTGTCAGAGATGTTGAACA
                      ____________________________________________________________
consensus             CCGTCAATCCTCCCAAAATCAAGGTTTCTGTTGAGTTTGGATTGTCAGAGATGTTGAACA
 
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JMSF046P01-           CAATTGCCATAAGACCTAAAGTGGCTCCCAAAGATGGAGACTTCAAATTTGTCATTTCAC
rJMSF051M02+          CAATTGCCATAAGACCTAAAGTGGCTCCCAAAGATGGAGACTTCAAATTTGTCATTTCAC
rJMSF046P01+          CAATTGCCATAAGACCTAAAGTGGCTCCCAAAGATGGAGACTTCAAATTTGTCATTTCAC
                      ____________________________________________________________
consensus             CAATTGCCATAAGACCTAAAGTGGCTCCCAAAGATGGAGACTTCAAATTTGTCATTTCAC
 
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JMSF046P01-           AGTGTGAAACTCACTTACCACCTGGAACCATTGACCACACTGCAGAACAAGTCTACAAAA
rJMSF051M02+          AGTGTGAAACTCACTTACCACCTGGAACCATTGACCACACTGCAGAACAAGTCTACAAAA
rJMSF046P01+          AGTGTGAAACTCACTTACCACCTGGAACCATTGACCACACTGCAGAACAAGTCTACAAAA
                      ____________________________________________________________
consensus             AGTGTGAAACTCACTTACCACCTGGAACCATTGACCACACTGCAGAACAAGTCTACAAAA
 
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JMSF046P01-           AGCTGCCGGAGTGGCAAGAAACACAACCAGACGCAAGGGCTAGGTACATTGAAGTCCTTA
rJMSF051M02+          AGCTGCCGGAGTGGCAAGAAACACAACCAGACGCAAGGGCTAGGTACATTGAAGTCCTTA
rJMSF046P01+          AGCTGCCGGAGTGGCAAGAAACACAACCAGACGCAAGGGCTAGGTACATTGAAGTCCTTA
                      ____________________________________________________________
consensus             AGCTGCCGGAGTGGCAAGAAACACAACCAGACGCAAGGGCTAGGTACATTGAAGTCCTTA
 
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JMSF046P01-           GAGCTCTTGCTGATAAATACCCTTCTGAGAATTTGCTGCTCATCACACACGGTGAGGGAG
rJMSF051M02+          GAGCTCTTGCTGATAAATACCCTTCTGAGAATTTGCTGCTCATCACACACGGTGAGGGAG
rJMSF046P01+          GAGCTCTTGCTGATAAATACCCTTCTGAGAATTTGCTGCTCATCACACACGGTGAGGGAG
                      ____________________________________________________________
consensus             GAGCTCTTGCTGATAAATACCCTTCTGAGAATTTGCTGCTCATCACACACGGTGAGGGAG
 
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JMSF046P01-           TGCTGTCTGTGGGTTCTGCATTCATGGAGGGTGATATTAAATGGGTTGAATACTGTGGAT
rJMSF051M02+          TGCTGTCTGTGGGTTCTGCATTCATGGAGGGTGATATTAAATGGGTTGAATACTGTGGAT
rJMSF046P01+          TGCTGTCTGTGGGTTCTGCATTCATGGAGGGTGATATTAAATGGGTTGAATACTGTGGAT
                      ____________________________________________________________
consensus             TGCTGTCTGTGGGTTCTGCATTCATGGAGGGTGATATTAAATGGGTTGAATACTGTGGAT
 
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JMSF046P01-           ATTCACACTTGAAAGAGAGCTATCCCGGCGGCCGGCG                       
rJMSF051M02+          ATTCACACTTG-AAGAGAGCTATCCCGGCGGCCGGCGAGAGCTGCGAGTCCTTTGCCGAT
rJMSF046P01+          ATTCACACTTG-AAGAGAGCTATCCCGGCGGCCGGCGAGAGCTGCGAGTCCTTTGCCGAT
                      ____________________________________________________________
consensus             ATTCACACTTG-AAGAGAGCTATCCCGGCGGCCGGCGAGAGCTGCGAGTCCTTTGCCGAT
 
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rJMSF051M02+          GAAGAGTTCAGGCTGCAGAGTGAATCTGGGTTTACATTCCATGACTCGTCTGCTAAGCCC
rJMSF046P01+          GAAGAGTTCAGGCTGCAGAGTGAATCTGGGTTTACATTCCATGACTCGTCTGCTAAGCCC
                      ____________________________________________________________
consensus             GAAGAGTTCAGGCTGCAGAGTGAATCTGGGTTTACATTCCATGACTCGTCTGCTAAGCCC
 
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rJMSF051M02+          GTCGTAGTATAATTAAGTGTATAAGTAATCATTATTGTTGAAGCAGCTTTATGTTTTGCG
rJMSF046P01+          GTCGTAGTATAATTAAGTGTATAAGTAATCATTATTGTTGAAGCAGCTTTATGTTTTGCG
                      ____________________________________________________________
consensus             GTCGTAGTATAATTAAGTGTATAAGTAATCATTATTGTTGAAGCAGCTTTATGTTTTGCG
 
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rJMSF051M02+          TTCTTGAAGTCCCATTAT                                          
rJMSF046P01+          TTCTTGAAGTCCCATTATTGATCTGTAATCAGTTGTCCGGCCGGCGGCCGTATCGTATGT
                      ____________________________________________________________
consensus             TTCTTGAAGTCCCATTATTGATCTGTAATCAGTTGTCCGGCCGGCGGCCGTATCGTATGT