Contig 005816:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001M17Sequence514008055 (5)ref|XP_006343041.1|1e-26PREDICTED: NADP-dependent malic enzyme, chloroplastic-like [Solanum tuberosum]756005816 (6)gb|AAB41026.1|2e-106NADP-malic enzyme, partial [Flaveria linearis]
JMFF004B16Sequence593008055 (5)ref|XP_006343041.1|1e-57PREDICTED: NADP-dependent malic enzyme, chloroplastic-like [Solanum tuberosum]720005816 (6)gb|AAB19243.1|6e-91NADP-malic enzyme, partial [Flaveria trinervia]
JMSF025A22Sequence608005816 (6)emb|CBI36068.3|2e-115unnamed protein product [Vitis vinifera]717005816 (6)gb|AAB19243.1|8e-95NADP-malic enzyme, partial [Flaveria trinervia]
JMSF035F07Sequence690006673 (9)ref|XP_009761754.1|187PREDICTED: uncharacterized protein LOC104213893 [Nicotiana sylvestris]464005816 (6)ref|XP_009591013.1|6e-36PREDICTED: NADP-dependent malic enzyme, chloroplastic-like [Nicotiana tomentosi
JMSF046G19Sequence674008055 (5)ref|XP_006343041.1|2e-61PREDICTED: NADP-dependent malic enzyme, chloroplastic-like [Solanum tuberosum]661005816 (6)gb|AAB19243.1|3e-78NADP-malic enzyme, partial [Flaveria trinervia]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF025A22- GGGGGGGCACTGGCATTGCT
                      ____________________________________________________________
consensus GGGGGGGCACTGGCATTGCT
 
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JMSF025A22- GAACTCATTGCGCTCGAGATGTCAAAACAGACGGGAGCCCCATTGGAAGAAACTCGGAAG
                      ____________________________________________________________
consensus GAACTCATTGCGCTCGAGATGTCAAAACAGACGGGAGCCCCATTGGAAGAAACTCGGAAG
 
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JMSF025A22- AAAATTTGGCTGGTGGACTCCAAAGGGCTGATTGTTAAGTCCCGGGTGGAATCACTTCAG
                      ____________________________________________________________
consensus AAAATTTGGCTGGTGGACTCCAAAGGGCTGATTGTTAAGTCCCGGGTGGAATCACTTCAG
 
. : . : . : . : . : . :
JMSF025A22- CACTTTAAAAGGCCGTGGGCCCACGAACACGAGCCCGTAAAGGATCTTGTGGATGCAGTG
rJMFF001M17+ CTTGTGGATGCAGTG
                      ____________________________________________________________
consensus CACTTTAAAAGGCCGTGGGCCCACGAACACGAGCCCGTAAAGGATCTTGTGGATGCAGTG
 
. : . : . : . : . : . :
JMSF025A22- AAGGCTATCAAGCCTACGGTCTTGATTGGATCTTCTGGAGCTGGAAGAACGTTCACG-AA
rJMFF001M17+ AAGGCTATCAAGCCTACGGTCTTGATTGGATCTTCTGGAGCTGGAAGAACGTTCACG-AA
rJMFF004B16+ GTCTTGATTGGATCTTCTGGAGCTGGAAGAACGTTCACGAAA
rJMSF025A22+ GAGCTGGAAGAACGTTCACG-AA
                      ____________________________________________________________
consensus AAGGCTATCAAGCCTACGGTCTTGATTGGATCTTCTGGAGCTGGAAGAACGTTCACG-AA
 
. : . : . : . : . : . :
JMSF025A22- AGATGTTATTGGAGCTATGGCTTCCTTCAACGAGAAACCTATCGTTCTTGCTCTCTCGAA
rJMFF001M17+ AGATGTTATTGGAGCTATGGCTTCCTTCAACGAGAAACCTATCGTTCTTGCTCTCTCGAA
rJMFF004B16+ AGATGTTATTGGAGCTATGGCTTCCTTCAACGAGAAACCTATCGTTCTTGCTCTCTCGAA
rJMSF025A22+ AGATGTTATTGGAGCTATGGCTTCCTTCAACGAGAAACCTATCGTTCTTGCTCTCTCGAA
                      ____________________________________________________________
consensus AGATGTTATTGGAGCTATGGCTTCCTTCAACGAGAAACCTATCGTTCTTGCTCTCTCGAA
 
. : . : . : . : . : . :
JMSF025A22- CCCAACATCGCAGTCGGAGTGTACCGCGGAAGAGGCGTATACCTGGAGTGAGGGCCGAGC
rJMFF001M17+ CCCAACATCGCAGTCGGAGTGTACCGCGGAAGAGGCGTATACCTGGAGTGAGGGCCGAGC
rJMFF004B16+ CCCAACATCGCAGTCGGAGTGTACCGCGGAAGAGGCGTATACCTGGAGTGAGGGCCGAGC
rJMSF025A22+ CCCAACATCGCAGTCGGAGTGTACCGCGGAAGAGGCGTATACCTGGAGTGAGGGCCGAGC
rJMSF046G19+ AACATCGCAGTCGGAGTGTACCGCGGAAGAGGCGTATACCTGGAGTGAGGGCCGAGC
                      ____________________________________________________________
consensus CCCAACATCGCAGTCGGAGTGTACCGCGGAAGAGGCGTATACCTGGAGTGAGGGCCGAGC
 
. : . : . : . : . : . :
JMSF025A22- TATATTTGCCAGTGGAAGCCCATTCCCCCCTTTCGAATACAAGGGGAGGACCCTTTTGTC
rJMFF001M17+ TATATTTGCCAGTGGAAGCCCATTCCCCCCTTTCGAATACAAGGGGAGGACCCTTTTGTC
rJMFF004B16+ TATATTTGCCAGTGGAAGCCCATTCCCCCCTTTCGAATACAAGGGGAGGACCCTTTNGTC
rJMSF025A22+ TATATTTGCCAGTGGAAGCCCATTCCCCCCTTTCGAATACAAGGGGAGGACCCTTTTGTC
rJMSF046G19+ TATATTTGCCAGTGGAAGCCCATTCCCCCCTTTCGAATACAAGGGGAGGACCCTTTTGTC
                      ____________________________________________________________
consensus TATATTTGCCAGTGGAAGCCCATTCCCCCCTTTCGAATACAAGGGGAGGACCCTTTTGTC
 
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JMSF025A22- CGGGCAGGCAAACAATGCATATATCTTCCCCGGGTTTGGTTTAGGACTCATAATTTCGGG
rJMFF001M17+ CGGGCAGGCAAACAATGCATATATCTTCCCCGGGTTTGGTTTAGGACTCATAATTTCGGG
rJMFF004B16+ CGGGCAGGCAAACAATGCATATATCTTCCCCGGGTTTGGTTTAGGACTCATAATTTCGGG
rJMSF025A22+ CGGGCAGGCAAACAATGCATATATCTTCCCCGGGTTTGGTTTAGGACTCATAATTTCGGG
rJMSF046G19+ CGGGCAGGCAAACAATGCATATATCTTCCCCGGGTTTGGTTTAGGACTCATAATTTCGGG
                      ____________________________________________________________
consensus CGGGCAGGCAAACAATGCATATATCTTCCCCGGGTTTGGTTTAGGACTCATAATTTCGGG
 
. : . : . : . : . : . :
JMSF025A22- TGCAATCCGTGTCCACGATGACATGCTTCTTGCGGCCTCGGAAGCTCTAGCTGCCGAGGT
rJMFF001M17+ TGCAATCCGTGTCCACGATGACATGCTTCTTGCGGCCTCGGAAGCTCTAGCTGCCGAGGT
rJMFF004B16+ TGCAATCCGTGTCCACGATGACATGCTTCTTGCGGCCTCGGAAGCTCTAGCTGCCGAGGT
rJMSF025A22+ TGCAATCCGTGTCCACGATGACATGCTTCTTGCGGCCTCGGAAGCTCTAGCTGCCGAGGT
rJMSF035F07+ CCACGATGACATGCTTCTTGCGGCCTCGGAAGCTCTAGCTGCCGAGGT
rJMSF046G19+ TGCAATCCGTGTCCACGATGACATGCTTCTTGCGGCCTCGGAAGCTCTAGCTGCCGAGGT
                      ____________________________________________________________
consensus TGCAATCCGTGTCCACGATGACATGCTTCTTGCGGCCTCGGAAGCTCTAGCTGCCGAGGT
 
. : . : . : . : . : . :
JMSF025A22- TACGCAAGAGAACTTCGATAAAGGACTCATATACCCTCCGTTTTCGAAC
rJMFF001M17+ TACGCAAGAGAACTTCGATAAAGGACTCATATACCCTCCGTTTTCGAACATCAGAAAAAT
rJMFF004B16+ TACGCAAGAGAACTTCGATAAAGGACTCATATACCCTCCGTTTTCGAACATCAGAAAAAT
rJMSF025A22+ TACGCAAGAGAACTTCGATAAAGGACTCATATACCCTCCGTTTTCGAACATCAGAAAAAT
rJMSF035F07+ TACGCAAGAGAACTTCGATAAAGGACTCATATACCCTCCGTTTTCGAACATCAGAAAAAT
rJMSF046G19+ TACGCAAGAGGACTTCGATAAAGGACTCATATACCCTCCGTTTTCGAACATCAGAAAAAT
                      ____________________________________________________________
consensus TACGCAAGAGAACTTCGATAAAGGACTCATATACCCTCCGTTTTCGAACATCAGAAAAAT
 
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rJMFF001M17+ CTCGGCCCATATTGCCGCCAGAGTAGCCGCCAAAGCATATGAACTCGGTTTGGCCACTCG
rJMFF004B16+ CTCGGCCCATATTGCCGCCAGAGTAGCCGCCAAAGCATATGAACTCGGTTTGGCCACTCG
rJMSF025A22+ CTCGGCCCATATTGCCGCCAGAGTAGCCGCCAAAGCATATGAACTCGGTTTGGCCACTCG
rJMSF035F07+ CTCGGCCCATATTGCCGCCAGAGTAGCCGCCAAAGCATATGAACTCGGTTTGGCCACTCG
rJMSF046G19+ CTCGGCCCATATTGCCGCCAGAGTAGCCGCCAAAGCATATGAACTCGGTTTGGCCACTCG
                      ____________________________________________________________
consensus CTCGGCCCATATTGCCGCCAGAGTAGCCGCCAAAGCATATGAACTCGGTTTGGCCACTCG
 
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rJMFF001M17+ TCTACCACAACCCGAAAACCTGGTTGCTTATGCCGAGAGCTGCATGTACAGCCCTACTTA
rJMFF004B16+ TCTACCACAACCCGAAAACCTGGTTGCTTATGCCGAGAGCTGCATGTACAGCCCTACTTA
rJMSF025A22+ TCTACCACAACCCGAAAACCTGGTTGCTTATGCCGAGAGCTGCATGTACAGCCCTACTTA
rJMSF035F07+ TCTACCACAACCCGAAAACCTGGTTGCTTATGCCGAGAGCTGCATGTACAGCCCTACTTA
rJMSF046G19+ TCTACCACAACCCGAAAACCTGGTTGCTTATGCCGAGAGCTGCATGTACAGCCCTACTTA
                      ____________________________________________________________
consensus TCTACCACAACCCGAAAACCTGGTTGCTTATGCCGAGAGCTGCATGTACAGCCCTACTTA
 
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rJMFF001M17+ CCGTAGCTATCGCTAAGCGGTTGGAAGATTTACTCTTTTTAAGATTTAGATAGTTAAGTC
rJMFF004B16+ CCGTAGCTATCGCTAAGCGGTTGGAAGATTTACTCTTTTTAAGATTTAGATAGTTAAGTC
rJMSF025A22+ CCGTAGCTATCGCTAAGCGGTTGGAAGATTTACTCCTTTTAAGATTTAGATAGTTAAGTC
rJMSF035F07+ CCGTAGCTATCGCTAAGCGGTTGGAAGATTTACTCTTTTTAAGATTTAGATAGTTAAGTC
rJMSF046G19+ CCGTAGCTATCGCTAAGCGGTTGGAAGATTTACTCTTTTTAAGATTTAGATAGTTAAGTC
                      ____________________________________________________________
consensus CCGTAGCTATCGCTAAGCGGTTGGAAGATTTACTCTTTTTAAGATTTAGATAGTTAAGTC
 
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rJMFF001M17+ TTTATTTTATTTTTTTCTTCTTTTTACATTTTGAATATGTGGTTTTAATTATTGAAGTTG
rJMFF004B16+ TTTATTTTATTTTTTTCTTCTTTTTACATTTTGAATATGTGGTTTTAATTATTGAAGTTG
rJMSF025A22+ TTTATTTTATTTTTTTCTTCTTTTTACATTTTGAATATGTGGTTTTAATTATTGAAGTTG
rJMSF035F07+ TTTATTTTATTTTTTTCTTCTTTTTACATTTTGAATATGTGGTTTTAATTATTGAAGTTG
rJMSF046G19+ TTTATTTTATTTTTTTCTTCTTTTTACATTTTGAATATGTGGTTTTAATTATTGAAGTTG
                      ____________________________________________________________
consensus TTTATTTTATTTTTTTCTTCTTTTTACATTTTGAATATGTGGTTTTAATTATTGAAGTTG
 
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rJMFF001M17+ AGGGTGTTTTTAGGAGCAGGTTTAAGGTTAGATTGCAGAAATGTT-TGTGCTAGTGATGA
rJMFF004B16+ AGGGTGTTTTTAGGAGCAGGTTTAAGGTTAGATTGCAGAAATTTTGTGTGCTAGTGATGA
rJMSF025A22+ AGGGTGTTTTTAGGAGCAGGTTTAAGGTTAGATTGCAGAAATGTTGTGTGCTAGTGATGA
rJMSF035F07+ AGGGTGTTTTTAGGAGCAGGTTTAAGGTTAGATTGCAGAAATGTTGTGTGCTAGTGATGA
rJMSF046G19+ AGGGTGTTTTTAGGAGCAGGTTTAAGGTTAGATTGCAGAAATGTTGTGTGCTAGTGATGA
                      ____________________________________________________________
consensus AGGGTGTTTTTAGGAGCAGGTTTAAGGTTAGATTGCAGAAATGTTGTGTGCTAGTGATGA
 
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rJMFF001M17+ ACTGATGA
rJMFF004B16+ ACTGATGATGTTAAAAAA
rJMSF025A22+ ACTGATGATGTTAAAAAAATANGAAAGTTTTTTAC
rJMSF035F07+ ACTGATGATGTTAAAAAAATAAGAAAGTTTTTTACTACT
rJMSF046G19+ ACTGATGATGTTAAAAAAATAAGAAAGTTTTTTACTACTTGAAAACCATATGTAGCTAAA
                      ____________________________________________________________
consensus ACTGATGATGTTAAAAAAATAAGAAAGTTTTTTACTACTTGAAAACCATATGTAGCTAAA