Contig 005815:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041A04Sequence623003641 (12)gb|KJB60281.1|5e-79hypothetical protein B456_009G297800 [Gossypium raimondii]597005815 (10)ref|XP_008446966.1|5e-47PREDICTED: aspartic proteinase nepenthesin-1 [Cucumis melo]
JMFF049B22Sequence647003641 (12)gb|KJB60281.1|8e-84hypothetical protein B456_009G297800 [Gossypium raimondii]601005815 (10)
JMSF004J07Sequence316003641 (12)gb|KJB60281.1|3e-30hypothetical protein B456_009G297800 [Gossypium raimondii]354005815 (10)
JMSF010L24Sequence336003641 (12)gb|KJB60281.1|3e-35hypothetical protein B456_009G297800 [Gossypium raimondii]716005815 (10)emb|CDP17284.1|6e-66unnamed protein product [Coffea canephora]
JMSF013D12Sequence502003641 (12)gb|KJB60281.1|1e-56hypothetical protein B456_009G297800 [Gossypium raimondii]760005815 (10)ref|XP_004170756.1|2e-71PREDICTED: aspartic proteinase nepenthesin-1-like, partial [Cucumis sativus]
JMSF018G10Sequence630003641 (12)gb|KJB60281.1|1e-57hypothetical protein B456_009G297800 [Gossypium raimondii]755005815 (10)ref|XP_004170756.1|2e-70PREDICTED: aspartic proteinase nepenthesin-1-like, partial [Cucumis sativus]
JMSF019I14Sequence601003641 (12)gb|KJB60281.1|6e-77hypothetical protein B456_009G297800 [Gossypium raimondii]713005815 (10)ref|XP_008446966.1|2e-31PREDICTED: aspartic proteinase nepenthesin-1 [Cucumis melo]
JMSF035I07Sequence671003641 (12)gb|KJB60281.1|1e-86hypothetical protein B456_009G297800 [Gossypium raimondii]652005815 (10)
JMSF046F16Sequence819003641 (12)gb|KJB60281.1|1e-93hypothetical protein B456_009G297800 [Gossypium raimondii]696005815 (10)
JMSF048P14Sequence653003641 (12)gb|KJB60281.1|6e-84hypothetical protein B456_009G297800 [Gossypium raimondii]737005815 (10)ref|XP_004170756.1|2e-68PREDICTED: aspartic proteinase nepenthesin-1-like, partial [Cucumis sativus]

Alignment

This contig is upended


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rJMSF010L24+                     CTCCGGGTTCCTTCACCTTTGATCCGGCCACCGGCGCAGGGACCATCAT
rJMSF013D12+                                                                  TCAT
rJMSF048P14+                                                                  TCAT
rJMSF018G10+                                                                  TCAT
                      ____________________________________________________________
consensus                        CTCCGGGTTCCTTCACCTTTGATCCGGCCACCGGCGCAGGGACCATCAT
 
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rJMSF010L24+          TGATTCCGGCACGGTGTTCACGCGGCTTGTCCAGCCGGCGTACGAAGCGGTCCGAGACGA
rJMSF013D12+          TGATTCCGGCACGGTGTTCACGCGGCTTGTCCAGCCGGCGTACGAAGCGGTCCGAGACGA
rJMSF048P14+          TGATTCCGGCACGGTGTTCACGCGGCTTGTCCAGCCGGCGTACGAAGCGGTCCGAGACGA
rJMFF041A04+                                                                   CGA
rJMSF018G10+          TGATTCCGGCACGGTGTTCACGCGGCTTGTCCAGCCGGCGTACGAAGCGGTCCGAGACGA
                      ____________________________________________________________
consensus             TGATTCCGGCACGGTGTTCACGCGGCTTGTCCAGCCGGCGTACGAAGCGGTCCGAGACGA
 
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rJMSF010L24+          ATTCCGGCGGCGGATGGGGCCGAACGCGACGGTGTCGTCATTGGGCGGGTTCGACACGTG
rJMSF013D12+          ATTCCGGCGGCGGATGGGGCCGAACGCGACGGTGTCGTCATTGGGCGGGTTCGACACGTG
rJMSF048P14+          ATTCCGGCGGCGGATGGGGCCGAACGCGACGGTGTCGTCATTGGGCGGGTTCGACACGTG
rJMFF041A04+          ATTCCGGCGGCGGATGGGGCCGAACGCGACGGTGTCGTCATTGGGCGGGTTCGACACGTG
rJMSF018G10+          ATTCCGGCGGCGGATGGGGCCGAACGCGACGGTGTCGTCATTGGGCGGGTTCGACACGTG
                      ____________________________________________________________
consensus             ATTCCGGCGGCGGATGGGGCCGAACGCGACGGTGTCGTCATTGGGCGGGTTCGACACGTG
 
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rJMSF010L24+          TTACACCGTCCCGGTAACGATACCGAGCTTAACGTTCATGTTCGCCGGGATGAACGTGAC
rJMSF013D12+          TTACACCGTCCCGGTAACGATACCGAGCTTAACGTTCATGTTCGCCGGGATGAACGTGAC
rJMSF048P14+          TTACACCGTCCCGGTAACGATACCGAGCTTAACGTTCATGTTCGCCGGGATGAACGTGAC
rJMFF041A04+          TTACACCGTCCCGGTAACGATACCGAGCTTAACGTTCATGTTCGCCGGGATGAACGTGAC
rJMSF018G10+          TTACACCGTCCCGGTAACGATACCGAGCTTAACGTTCATGTTCGCCGGGATGAACGTGAC
rJMSF019I14+              ACCGTCCCGGTAACGATACCGAGCTTAACGTTCATGTTCGCCGGGATGAACGTGAC
                      ____________________________________________________________
consensus             TTACACCGTCCCGGTAACGATACCGAGCTTAACGTTCATGTTCGCCGGGATGAACGTGAC
 
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rJMSF010L24+          GCTGCCGCCGGACAACTTCCTCATCCACAGCTCCTCCGGCAGCACCACCTGCCTGGCCAT
rJMSF013D12+          GCTGCCGCCGGACAACTTCCTCATCCACAGCTCCTCCGGCAGCACCACCTGCCTGGCCAT
rJMSF048P14+          GCTGCCGCCGGACAACTTCCTCATCCACAGCTCCTCCGGCAGCACCACCTGCCTGGCCAT
rJMFF041A04+          GCTGCCGCCGGACAACTTCCTCATCCACAGCTCCTCCGGCAGCACCACCTGCCTGGCCAT
rJMSF018G10+          GCTGCCGCCGGACAACTTCCTCATCCACAGCTCCTCCGGCAGCACCACCTGCCTGGCCAT
rJMSF019I14+          GCTGCCGCCGGACAACTTCCTCATCCACAGCTCCTCCGGCAGCACCACCTGCCTGGCCAT
                      ____________________________________________________________
consensus             GCTGCCGCCGGACAACTTCCTCATCCACAGCTCCTCCGGCAGCACCACCTGCCTGGCCAT
 
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rJMSF010L24+          GTCCGGCGCCCCCGCCCTCAACGTCATCGCCAACCTGCAGCAGCAGAACCACCGCATCCT
rJMSF013D12+          GTCCGGCGCCCCCGCCCTCAACGTCATCGCCAACCTGCAGCAGCAGAACCACCGCATCCT
rJMSF048P14+          GTCCGGCGCCCCCGCCCTCAACGTCATCGCCAACCTGCAGCAGCAGAACCACCGCATCCT
rJMFF041A04+          GTCCGGCGCCCCCGCCCTCAACGTCATCGCCAACCTGCAGCAGCAGAACCACCGCATCCT
rJMSF018G10+          GTCCGGCGCCCCCGCCCTCAACGTCATCGCCAACCTGCAGCAGCAGAACCACCGCATCCT
rJMSF019I14+          GTCCGGCGCCCCCGCCCTCAACGTCATCGCCAACCTGCAGCAGCAGAACCACCGCATCCT
                      ____________________________________________________________
consensus             GTCCGGCGCCCCCGCCCTCAACGTCATCGCCAACCTGCAGCAGCAGAACCACCGCATCCT
 
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rJMSF010L24+          GTTCGACATCCCAAACTCCAGGCTAGGCGTTGCCCGCGAACCTTGCAGCTAGAATTCCGG
rJMSF013D12+          GTTCGACATCCCAAACTCCAGGCTAGGCGTTGCCCGCGAACCTTGCAGCTAGAATTCCGG
rJMSF048P14+          GTTCGACATCCCAAACTCCAGGCTAGGCGTTGCCCGCGAACCTTGCAGCTAGAATTCCGG
rJMFF041A04+          GTTCGACATCCCAAACTCCAGGCTAGGCGTTGCCCGCGAACCTTGCAGCTAGAATTCCGG
rJMSF004J07+                       AACTCCAGGCTAGGCGTTGCCCGCGAACCTTGCAGCTAGAATTCCGG
rJMSF018G10+          GTTCGACATCCCAAACTCCAGGCTAGGCGTTGCCCGCGAACCTTGCAGCTAGAATTCCGG
rJMSF019I14+          GTTCGACATCCCAAACTCCAGGCTAGGCGTTGCCCGCGAACCTTGCAGCTAGAATTCCGG
rJMSF035I07+                  TCCCAAACTCCAGGCTAGGCGTTGCCCGCGAACCTTGCAGCTAGAATTCCGG
rJMFF049B22+                                                            AGAATTCCGG
rJMSF046F16+                                CTAGGCGTTGCCCGCGAACCTTGCAGCTAGAATTCCGG
                      ____________________________________________________________
consensus             GTTCGACATCCCAAACTCCAGGCTAGGCGTTGCCCGCGAACCTTGCAGCTAGAATTCCGG
 
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rJMSF010L24+          CCCGTTCTTCAATCAATTTACTAATTAATAATTATCTATAGTTAATTAGTGATTAATTAG
rJMSF013D12+          CCCGTTCTTCAATCAATTTACTAATTAATAATTATCTATAGTTAATTAGTGATTAATTAG
rJMSF048P14+          CCCGTTCTTCAATCAATTTACTAATTAATAATTATCTATAGTTAATTAGTGATTAATTAG
rJMFF041A04+          CCCGTTCTTCAATCAATTTACTAATTAATAATTATCTATAGTTAATTAGTGATTAATTAG
rJMSF004J07+          CCCGTTCNTCAATCAATTTACTAATTAATAATTATCTATAGTTAATTAGTGATTAATTAG
rJMSF018G10+          CCCGTTCTTCAATCAATTTACTAATTAATAATTATCTATAGTTAATTAGTGATTAATTAG
rJMSF019I14+          CCCGTTCTTCAATCAATTTACTAATTAATAATTATCTATAGTTAATTAGTGATTAATTAG
rJMSF035I07+          CCCGTTCTTCAATCAATTTACTAATTAATAATTATCTATAGTTAATTAGTGATTAATTAG
rJMFF049B22+          CCCGTTCTTCAATCAATTTACTAATTAATAATTATCTATAGTTAATTAGTGATTAATTAG
rJMSF046F16+          CCCGTTCTTCAATCAATTTACTAATTAATAATTATCTATAGTTAATTAGTGATTAATTAG
                      ____________________________________________________________
consensus             CCCGTTCTTCAATCAATTTACTAATTAATAATTATCTATAGTTAATTAGTGATTAATTAG
 
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rJMSF010L24+          CGGGCAATTAGTTGAGGAAACCTATGATCTTCGGTATGCAGTTCTTGGTCTTTTTGCGGT
rJMSF013D12+          CGGGCAATTAGTTGAGGAAACCTATGATCTTCGGTATGCAGTTCTTGGTCTTTTTGCGGT
rJMSF048P14+          CGGGCAATTAGTTGAGGAAACCTATGATCTTCGGTATGCAGTTCTTGGTCTTTTTGCGGT
rJMFF041A04+          CGGGCAATTAGTTGAGGAAACCTATGATCTTCGGTATGCAGTTCTTGGTCTTTTTGCGGT
rJMSF004J07+          CGGGCAATTAGTTGAGGAAACCTATGATCTTCGGTATGCAGTTCTTGGTCTTTTTGCGGT
rJMSF018G10+          CGGGCAATTAGTTGAGGAAACCTATGATCTTCGGTATGCAGTTCTTGGTCTTTTTGCGGT
rJMSF019I14+          CGGGCAATTAGTTGAGGAAACCTATGATCTTCGGTATGCAGTTCTTGGTCTTTTTGCGGT
rJMSF035I07+          CGGGCAATTAGTTGAGGAAACCTATGATCTTCGGTATGCAGTTCTTGGTCTTTTTGCGGT
rJMFF049B22+          CGGGCAATTAGTTGAGGAAACCTATGATCTTCGGTATGCAGTTCTTGGTCTTTTTGCGGT
rJMSF046F16+          CGGGCAATTAGTTGAGGAAACCTATGATCTTCGGTATGCAGTTCTTGGTCTTTTTGCGGT
                      ____________________________________________________________
consensus             CGGGCAATTAGTTGAGGAAACCTATGATCTTCGGTATGCAGTTCTTGGTCTTTTTGCGGT
 
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rJMSF010L24+          ACACCTCTTTTGAGTGAGATAGATGACTTGGAGATTTAAGGTTGTTTCATACTCAAAGTC
rJMSF013D12+          ACACCTCTTTTGAGTGAGATAGATGACTTGGAGATTTAAGGTTGTTTCATACTCAAAGTC
rJMSF048P14+          ACACCTCTTTTGAGTGAGATAGATGACTTGGAGATTTAAGGTTGTTTCATACTCAAAGTC
rJMFF041A04+          ACACCTCTTTTGAGTGAGATAGATGACTTGGAGATTTAAGGTTGTTTCATACTCAAAGTC
rJMSF004J07+          ACACCTCTTTTGAGTGAGATAGATGACTTGGAGATTTAAGGTTGTTTCATACTCAAAGTC
rJMSF018G10+          ACACCTCTTTTGAGTGAGATAGATGACTTGGAGATTTAAGGTTGTTTCATACTCAAAGTC
rJMSF019I14+          ACACCTCTTTTGAGTGAGATAGATGACTTGGAGATTTAAGGTTGTTTCATACTCAAAGTC
rJMSF035I07+          ACNCCTCTTTTGAGTGAGATAGATGACTTGGAGATTTAAGGTTGTTTCATACTCAAAGTC
rJMFF049B22+          ACACCTCTTTTGAGTGAGATAGATGACTTGGAGATTTAAGGTTGTTTCATACTCAAAGTC
rJMSF046F16+          ACACCTCTTTTGAGTGAGATAGATGACTTGGAGATTTAAGGTTGTTTCATACTCAAAGTC
                      ____________________________________________________________
consensus             ACACCTCTTTTGAGTGAGATAGATGACTTGGAGATTTAAGGTTGTTTCATACTCAAAGTC
 
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rJMSF010L24+          AAGGATCGAATCACTAACCTTTGATTAAGGATGAATGAGTCTCTTTCACTCAATCACGCT
rJMSF013D12+          AAGGATCGAATCACTAACCTTTGATTAAGGATGAATGAGTCTCTTTCACTCAATCACGCT
rJMSF048P14+          AAGGATCGAATCACTAACCTTTGATTAAGGATGAATGAGTCTCTTTCACTCAATCACGCT
rJMFF041A04+          AAGGATCGAATCACTAACCTTTGATTAAGGATGAATGAGTCTCTTTCACTCAATCACGCT
rJMSF004J07+          AAGGATCGAATCACTAACCTTTGATTAAGGATGAATGAGTCTCTTTCACTCAATCACGCT
rJMSF018G10+          AAGGATCGAATCACTAACCTTTGATTAAGGATGAATGAGTCTCTTTCACTCAATCACGCT
rJMSF019I14+          AAGGATCGAATCNCTAACCTTTGATTAAGGATGAATGAGTCTCTTTCACTCAATCNCGCT
rJMSF035I07+          AAGGATCGAATCNCTAACCTTTGATTAAGGATGAATGAGTCTCTTTCACTCAATCNCGCT
rJMFF049B22+          AAGGATCGAATCACTACCCTTTGATTAAGGATGAATGAGTTTCTTTCACTCAATCACGCT
rJMSF046F16+          AAGGATCGAATCACTAACCTTTGATTAAGGATGAATGAGTCTCTTTCACTCAATCACGCT
                      ____________________________________________________________
consensus             AAGGATCGAATCACTAACCTTTGATTAAGGATGAATGAGTCTCTTTCACTCAATCACGCT
 
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rJMSF010L24+          ATCAAGGTTATAATCTTCCAGTGTGTGATTACTAGTTGCTGGTCGACTGACCAAGAAAAT
rJMSF013D12+          ATCAAGGTTATAATCTT-CAGTGTGTGATTACTAGTTGCTGGTCGACTGACCAAGAAAAT
rJMSF048P14+          ATCAAGGTTATAATCTT-CAGTGTGTGATTACTAGTTGCTGGTCGACTGACCAAGAAAAT
rJMFF041A04+          ATCAAGGTTATAATCTT-CAGTGTGTGATTACTAGTTGCTGGTCGACTGACCAAG     
rJMSF004J07+          ATCAAGGTTATAATCTT-CAGTGTGTGATTACTAGTTGCTGGTCGACTGACCAAGAAAAT
rJMSF018G10+          ATCAAGGTTATAATCTT-CAGTGTGTGATTACTAGTTGCTGGTCGACTGACCAAGAAAAT
rJMSF019I14+          ATCAAGGTTATAATCTT-CAGTGTGTGATTACTAGTTGCTGGTCGACTGACCAAGAAAAT
rJMSF035I07+          ATCAAGGTTATAATCTT-CAGTGTGTGATTACTAGTTGCTGGTCGACTGACCAAGAAAAT
rJMFF049B22+          ATCAAGGTTATAATCTT-CAGTGTGTGATTACTAGTTGCTGGTCGACTGACCAAGAAAAT
rJMSF046F16+          ATCAAGGTTATAATCTT-CAGTGTGTGATTACTAGTTGCTGGTCGACTGACCAAGAAAAT
                      ____________________________________________________________
consensus             ATCAAGGTTATAATCTT-CAGTGTGTGATTACTAGTTGCTGGTCGACTGACCAAGAAAAT
 
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rJMSF010L24+          TAGTAGT                                                     
rJMSF013D12+          TAGTAGTTTTCAGTGTT                                           
rJMSF048P14+          TAGTAGTTTTCAGTGT                                            
rJMSF004J07+          TAGTAGTT                                                    
rJMSF018G10+          TAGTAGTTTTCAGTGTT                                           
rJMSF019I14+          TAGTAGTTTTCAGTGTTTGATTTCTAATTATTGGTCTATGGATAGAAAAAATTTGTAACN
rJMSF035I07+          TAGTAGTTTTCAGTGTTTGATTTCTAATTATTGGTCTATGGATAGAAAAAATTTGTAACN
rJMFF049B22+          TAGTAGTTTTCAGTGTTTGATTTTTAATTATTGGTCTATGGATAGAAAAAATTTGTAACA
rJMSF046F16+          TAGTAGTTTTCAGTGTTTGATTTCTAATTATTGGTCTATGGATAGAAAAAATTTGTAACN
                      ____________________________________________________________
consensus             TAGTAGTTTTCAGTGTTTGATTTCTAATTATTGGTCTATGGATAGAAAAAATTTGTAACA
 
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rJMSF019I14+          TTTTTAGTGTGTGATTGCTAATTGATTGGTCGATAAAACTTATGATCGGACCAAAAATTA
rJMSF035I07+          TTTTTAGTGTGTGATTGCTAATTGATTGGTCGATAAAACTTATGATCGGACCAAAAATTA
rJMFF049B22+          TTTTTAGTGTGTGATTGCTAATTGATTGGTCGATAAAACTTATGATCGGACCAAAAATTA
rJMSF046F16+          TTTTTAGTGTGNGATTGCTAATTGATTGGTCGATAAAACTTATGATCGGACCAAAAATTA
                      ____________________________________________________________
consensus             TTTTTAGTGTGTGATTGCTAATTGATTGGTCGATAAAACTTATGATCGGACCAAAAATTA
 
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rJMSF019I14+          GCGAGGTGGTCACGGGCGCAAAAGAGCGTTGTGTCCCCTATGATGTGTTATTGTTTTT  
rJMSF035I07+          GCGAGGTGGTCNCGGGCGCAAAAGAGCGTTGTGTCCCCTATGATGTGTTATTGTTTTTTG
rJMFF049B22+          GCGAGGTGGTCACGGGCGCAAAAGAGCGTTGTGTCCCCTATGATGTGTTATTGTTTTTTG
rJMSF046F16+          GCGAGGTGGTCACGGGCGCAAAAGAGCGTTGTGTCCCCTATGATGTGTTATTGTTTTTTG
                      ____________________________________________________________
consensus             GCGAGGTGGTCACGGGCGCAAAAGAGCGTTGTGTCCCCTATGATGTGTTATTGTTTTTTG
 
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rJMSF035I07+          GGA-TTTTTTTTTTCTTGTCTTTTTGTTTGATTGATGATAATTCTGATTTCTTGTCAAAT
rJMFF049B22+          GGATTTTTTTTTTTCTTGTCTTTTTGTTTGATTGATGATAATTCTGATTTCTTGTC    
rJMSF046F16+          GGA-TTTTTTTTTTCTTGTCTTTTTGTTTGATTGATGATAATTCTGATTTCTTGTCAAAT
                      ____________________________________________________________
consensus             GGA-TTTTTTTTTTCTTGTCTTTTTGTTTGATTGATGATAATTCTGATTTCTTGTCAAAT
 
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rJMSF035I07+          GTATGTGTGAATGTGTGAGGAATTGTGGGGTTTTTGTTGGGTTTTGTCTGCTGCCAT   
rJMSF046F16+          GTATGTGTGAATGTGTGAGGAATTGTGGGGTTTTTGTTGGGTTTTGTCTGCTGCCATTGA
                      ____________________________________________________________
consensus             GTATGTGTGAATGTGTGAGGAATTGTGGGGTTTTTGTTGGGTTTTGTCTGCTGCCATTGA
 
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rJMSF046F16+          TCCAATAGCGCTGATTAAGGTACCGAGTCACGGGTTGCAATNTCAGATCTGTTTGTCATT
                      ____________________________________________________________
consensus             TCCAATAGCGCTGATTAAGGTACCGAGTCACGGGTTGCAATNTCAGATCTGTTTGTCATT