| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012M02 | Sequence | 520 | 003450 (8) | ref|XP_011102070.1| | 2e-67 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | 801 | 005812 (8) | emb|CAN65055.1| | 2e-113 | hypothetical protein VITISV_012378 [Vitis vinifera] |
| JMFF019N05 | Sequence | 588 | 003450 (8) | ref|XP_011102070.1| | 6e-76 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | 766 | 005812 (8) | emb|CAN65055.1| | 4e-106 | hypothetical protein VITISV_012378 [Vitis vinifera] |
| JMSF021N17 | Sequence | 690 | 024171 | emb|CDO96888.1| | 3e-54 | unnamed protein product [Coffea canephora] | 721 | 005812 (8) | ref|XP_006358131.1| | 2e-102 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 |
| JMSF023E11 | Sequence | 671 | 000598 (9) | ref|XP_011102070.1| | 9e-89 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | 745 | 005812 (8) | ref|XP_007025271.1| | 3e-105 | Leucine-rich repeat transmembrane protein kinase [Theobroma cacao] gb|EOY27893.1 |
| JMSF027K20 | Sequence | 661 | 003450 (8) | ref|XP_011102070.1| | 2e-82 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein | 748 | 005812 (8) | ref|XP_007025271.1| | 1e-131 | Leucine-rich repeat transmembrane protein kinase [Theobroma cacao] gb|EOY27893.1 |
| JMSF036I06 | Sequence | 660 | 005812 (8) | ref|XP_009795509.1| | 9e-70 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 | 768 | 005812 (8) | gb|KJB57368.1| | 2e-101 | hypothetical protein B456_009G159600 [Gossypium raimondii] |
| JMSF045G23 | Sequence | 746 | 012591 (2) | ref|XP_011102303.1| | 1e-96 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 | 751 | 005812 (8) | ref|XP_007025266.1| | 5e-76 | Leucine-rich repeat transmembrane protein kinase, putative [Theobroma cacao] gb |
This contig is upended
. : . : . : . : . : . :
JMSF036I06- GGCAATGTTTCGATTGGTGACACTACATATGACGCAGATAA
____________________________________________________________
consensus GGCAATGTTTCGATTGGTGACACTACATATGACGCAGATAA
. : . : . : . : . : . :
JMSF036I06- AGATTCTGTTGGACCTGCCAAATTTGTTTCCAATACAGAGAACTAGGTAGCCCCTAATAC
____________________________________________________________
consensus AGATTCTGTTGGACCTGCCAAATTTGTTTCCAATACAGAGAACTAGGTAGCCCCTAATAC
. : . : . : . : . : . :
JMSF036I06- AGGGTACTTTTGGGACTCAATGTCAGATAACTATACACGGTATACGGCAACAAATATATC
____________________________________________________________
consensus AGGGTACTTTTGGGACTCAATGTCAGATAACTATACACGGTATACGGCAACAAATATATC
. : . : . : . : . : . :
JMSF036I06- TGTCGTCAATGCAGAAGACTCTGAAATTTACAAGACTGCTCGTTTGTCTCCTTTATCTCT
____________________________________________________________
consensus TGTCGTCAATGCAGAAGACTCTGAAATTTACAAGACTGCTCGTTTGTCTCCTTTATCTCT
. : . : . : . : . : . :
JMSF036I06- AACGTATAACGGGCGTTGTTTGGCAAATGGAAACTATACTGTGAAACTTCATTTTGCAGA
rJMSF036I06+ GCAGA
____________________________________________________________
consensus AACGTATAACGGGCGTTGTTTGGCAAATGGAAACTATACTGTGAAACTTCATTTTGCAGA
. : . : . : . : . : . :
JMSF036I06- GATAGTTATTAGAGATAATAGATCTTTTCAAAGTTTTGGAAGACGCATATTTGATGTTTA
rJMSF036I06+ GATAGTTATTAGAGATAATAGATCTTTTCAAAGTTTTGGAAGACGCATATTTGATGTTTA
____________________________________________________________
consensus GATAGTTATTAGAGATAATAGATCTTTTCAAAGTTTTGGAAGACGCATATTTGATGTTTA
. : . : . : . : . : . :
JMSF036I06- CATACAGGGTGAAATGAAATTAAAGGATTTTGAAATTAAAACTGAAGCACAAGGAGTTGA
rJMSF036I06+ CATACAGGGTGAAATGAAATTAAAGGATTTTGAAATTAAAACTGAAGCACAAGGAGTTGA
____________________________________________________________
consensus CATACAGGGTGAAATGAAATTAAAGGATTTTGAAATTAAAACTGAAGCACAAGGAGTTGA
. : . : . : . : . : . :
JMSF036I06- TAAAGCCTTAGTTAAAGAATTTCAAATAATTGTTAGAGATAAAACTCTAGAGGTGCGATT
rJMSF036I06+ TAAAGCCTTAGTTAAAGAATTTCAAATAATTGTTAGAGATAAAACTCTAGAGGTGCGATT
____________________________________________________________
consensus TAAAGCCTTAGTTAAAGAATTTCAAATAATTGTTAGAGATAAAACTCTAGAGGTGCGATT
. : . : . : . : . : . :
JMSF036I06- TGTGTATGCTG
rJMSF036I06+ TGTGTATGCTGGGAAAGGAAGATATGGACCTTTAATATCTGCCATTTCTGTGAAATTTGC
____________________________________________________________
consensus TGTGTATGCTGGGAAAGGAAGATATGGACCTTTAATATCTGCCATTTCTGTGAAATTTGC
. : . : . : . : . : . :
rJMSF036I06+ CAATTCTGTAGATTTTAAGCCTCCCGAACAGCAAAAGACTTTCGTCAAGCCTCCCAAAAA
____________________________________________________________
consensus CAATTCTGTAGATTTTAAGCCTCCCGAACAGCAAAAGACTTTCGTCAAGCCTCCCAAAAA
. : . : . : . : . : . :
rJMSF036I06+ GCGAAAGACTTTAATCATAGTTGGTGCAGTAACTTTTTCTTTGTTTCTTACTATCACAAT
____________________________________________________________
consensus GCGAAAGACTTTAATCATAGTTGGTGCAGTAACTTTTTCTTTGTTTCTTACTATCACAAT
. : . : . : . : . : . :
rJMSF036I06+ TCTCTGTTTTGTCTGGTGGAAGATCTACATAAGAAACAAGACCTCACCAGGAAGAGGAGA
____________________________________________________________
consensus TCTCTGTTTTGTCTGGTGGAAGATCTACATAAGAAACAAGACCTCACCAGGAAGAGGAGA
. : . : . : . : . : . :
rJMSF036I06+ ACGAGATGTTGATCTAGGAACAGGACTGTTTTCCTTCACACAAATTAAAACCGCTACAAA
____________________________________________________________
consensus ACGAGATGTTGATCTAGGAACAGGACTGTTTTCCTTCACACAAATTAAAACCGCTACAAA
. : . : . : . : . : . :
rJMSF036I06+ CAACTTTGATGCTGCAAATAAGATTGGAGAAGGTGGCTTTGGACCTGTCTACAAGGGTAT
____________________________________________________________
consensus CAACTTTGATGCTGCAAATAAGATTGGAGAAGGTGGCTTTGGACCTGTCTACAAGGGTAT
. : . : . : . : . : . :
rJMSF036I06+ ATTATTGGATGGTACGATTATTGCTGTAAAACAACTCTCATCCAAATCAAGTCAAGGAAA
rJMSF021N17+ AAATCACGACAAGGATA
____________________________________________________________
consensus ATTATTGGATGGTACGATTATTGCTGTAAAACAACTCTCATCCAAATCACGTCAAGGATA
. : . : . : . : . : . :
rJMSF036I06+ TCGCGAATTTTTAAATGAAATAGGCATGATTTCTTGTTTGCAGCATCCTAATCTTGTGAA
rJMSF021N17+ CCGTGAATTTTTGAATGAAATAGGCATGATTTCTTGTCTGCAGCACCCTAATCTTGTGAA
rJMSF027K20+ TTTTGAATGAAATAGGCATGATTTCATGTTTGCAGCACCCCAACCTTGTGAA
____________________________________________________________
consensus TCGTGAATTTTTGAATGAAATAGGCATGATTTCTTGTTTGCAGCACCCTAATCTTGTGAA
. : . : . : . : . : . :
rJMSF036I06+ ACTTTATGGGTGTTGTGTTGAGGGAAAGCAATTGCTGCTGGTGTACGAGTACTTGGAAAA
rJMSF021N17+ ACTCTATGGGTGTTGTGTTGAGAGAAAGCCATTGTTGCTGGTGTATGAGTACATGGAAAA
rJMFF012M02+ TGGAAAC
rJMSF027K20+ ACTTTATGGGTGTTGTGTAGAAAGAAAGCCGTTGCTGCTGGTATATGAATACATGGAAAA
____________________________________________________________
consensus ACTTTATGGGTGTTGTGTTGAGAGAAAGCCATTGCTGCTGGTGTATGAGTACATGGAAAA
. : . : . : . : . : . :
rJMSF036I06+ CAATAGCCTTGCTCATGCTCTTTT
rJMSF021N17+ CAACAGCCTTGCCCATGCTCTTTTTGGTCCAGAAGAGTGTC------ACATAAACTGGCC
rJMFF019N05+ TTTTGGTTCAGAAGATCGACAACTGAAAATAGATTGGGC
rJMFF012M02+ CAATAGCCTTGCCAATGCTCTTTTTGGTTCAGAAGATCGACAACTGAAAATAGATTGGGC
rJMSF023E11+ GAAGATTGTCAACTGAATATAGACTGGCC
rJMSF027K20+ CAATAGCCTTGCCAATGCTCTTTTTGGTTCAGAAGATCGACAACTGAAAATAGATTGGGC
rJMSF045G23+ GAAAATAGATTGGGC
____________________________________________________________
consensus CAATAGCCTTGCCCATGCTCTTTTTGGTTCAGAAGATCGACAACTGAAAATAGATTGGGC
. : . : . : . : . : . :
rJMSF021N17+ TACAAGACAAAGTA-TTTGTGTTGGTATTGCAAAAGGTTTAGCCTTTCTGCATGAAGAAT
rJMFF019N05+ TACTAGACAAAGAA-TTTGTGTCGGTATTGCAAAAGGTTTAGCTTTCCTGCATGAAGAAT
rJMFF012M02+ TACTAGACAAAGAA-TTTGTGTCGGTATTGCAAAAGGTTTAGCTTTCCTGCATGAAGAAT
rJMSF023E11+ TACCAGACAAAAAA-TATGTCTCGGTATTGCAAAAGGTTTAGCTTTCTTGCACGAAGAAT
rJMSF027K20+ TACTAGACAAAGAA-TTTGTGTCGGTATTGCAAAAGGTTTAGCTTTCCTGCATGAAGAAT
rJMSF045G23+ TACTAGACAAAGAATTTTGTGTCGGTATTGCAAAAGGTTTAGCTTTCCTGCATGAAGAAT
____________________________________________________________
consensus TACTAGACAAAGAA-TTTGTGTCGGTATTGCAAAAGGTTTAGCTTTCCTGCATGAAGAAT
. : . : . : . : . : . :
rJMSF021N17+ CAGCAATAAAAGTTGTTCATAGAGACATCAAGACCGCCAATGTTCTTCTTGACAAAGAAC
rJMFF019N05+ CAACAATAAAAGTTGTTCATAGAGACATTAAAACCGCCAATGTGCTTCTTGACAAGGAAC
rJMFF012M02+ CAACAATAAAAGTTGTTCATAGAGACATTAAAACCGCCAATGTGCTTCTTGACAAGGAAC
rJMSF023E11+ CAGCAATAAAAATTGTTCATAGAGACATTAAAGCCTCCAACGTGCTTCTTGACAAAGAGC
rJMSF027K20+ CAACAATAAAAGTTGTTCATAGAGACATTAAAACCGCCAATGTGCTTCTTGACAAGGAAC
rJMSF045G23+ CAACAATAAAAGTTGTTCATAGAGACATTAAAACCGCCAATGTGCTTCTTGACAAGGAAC
____________________________________________________________
consensus CAACAATAAAAGTTGTTCATAGAGACATTAAAACCGCCAATGTGCTTCTTGACAAGGAAC
. : . : . : . : . : . :
rJMSF021N17+ TCAATCCAAAAATTTCTGACTTTGGTTTAGCTAAACTCTATGATGATGACAAGTCACACA
rJMFF019N05+ TCAATCCAAAAATTTCTGACTTTGGTTTAGCTAAACTTGACGATGATGAGAAGTCACACA
rJMFF012M02+ TCAATCCAAAAATTTCTGACTTTGGTTTAGCTAAACTTGACGATGATGAGAAGTCACACA
rJMSF023E11+ TCAATCCAAAAATTTCTGATTTTGGTCTAGCTAAGCTTGACGATGATGAGAATACACACA
rJMSF027K20+ TCAATCCAAAAATTTCTGACTTTGGTTTAGCTAAACTTGACGATGATGAGAAGTCACACA
rJMSF045G23+ TCAATCCAAAAATTTCTGACTTTGGTTTAGCTAAACTTGACGATGATGAGAAGTCACACA
____________________________________________________________
consensus TCAATCCAAAAATTTCTGACTTTGGTTTAGCTAAACTTGACGATGATGAGAAGTCACACA
. : . : . : . : . : . :
rJMSF021N17+ TCAGCACAAGAGTTGCTGGGACAATGGGATACACTGCTCCTGAATATGCATTGTGGGGCT
rJMFF019N05+ TCAGTACAAGAGTTGCTGGGACAATAGGATACACGGCTCCTGAATATGCATTGTGGGGCT
rJMFF012M02+ TCAGTACAAGAGTTGCTGGGACAATAGGATACACGGCTCCTGAATATGCATTGTGGGGCT
rJMSF023E11+ TCAGCACAAGAGTTGCTGGGACAGTAGGATACATGGCTCCTGAATATACACTCTGGGGCT
rJMSF027K20+ TCAGTACAAGAGTTGCTGGGACAATAGGATACACGGCTCCTGAATATGCATTGTGGGGCT
rJMSF045G23+ TCAGTACAAGAGTTGCTGGGACAATAGGATACACGGCTCCTGAATATGCATTGTGGGGCT
____________________________________________________________
consensus TCAGTACAAGAGTTGCTGGGACAATAGGATACACGGCTCCTGAATATGCATTGTGGGGCT
. : . : . : . : . : . :
rJMSF021N17+ ACTTAACATTCAAAGCTGATGTCTATAGTTTTGGAGTGGTGGCATTGGAAATTGTTGCCG
rJMFF019N05+ ACTTAACATTCAAAGCTGATGTCTATAGTTTCGGGGTGGTGGCACTAGAAATTGTTTCTG
rJMFF012M02+ ACTTAACATTCAAAGCTGATGTCTATAGTTTCGGGGTGGTGGCACTAGAAATTGTTTCTG
rJMSF023E11+ ACTTAACATACAAAGTCGATGTGTATAGTTTCGGAGTGGTGGCACTAGAAATTGTTGCCG
rJMSF027K20+ ACTTAACATTCAAAGCTGATGTCTATAGTTTCGGGGTGGTGGCACTAGAAATTGTTTCTG
rJMSF045G23+ ACTTAACATTCAAAGCTGATGTCTATAGTTTCGGGGT--TGGCACTAGAAATTGTTTCTG
____________________________________________________________
consensus ACTTAACATTCAAAGCTGATGTCTATAGTTTCGGGGTGGTGGCACTAGAAATTGTTTCTG
. : . : . : . : . : . :
rJMSF021N17+ GGATGAACAACATGAAGTATCGTCATGATGAGGAGTGTGTTTGCCTTCTTGATTGGG
rJMFF019N05+ GGAAGAACAACATGAAATTTCGCCCCGATGAGAACTACGTTTGCCTCCTTGATTGGGCAC
rJMFF012M02+ GGAAGAACAACATGAAATTTCGCCCCGATGAGAACTACGTTTGCCTCCTNGATTGGGCAC
rJMSF023E11+ GGAAAAACAACATGAAGCATCGTCATGATGAGGACTATGTTTGCCTCCTTGATTGGGCAC
rJMSF027K20+ GGAAGAACAACATGAAATTTCGCCCCGATGAGAACTACGTTTGCCTCCTTGATTGGGCAC
rJMSF045G23+ GGAAGAACAACATGAAATTTCGCCCCGATGAGAACTACGTTTGCCTCCTTGATTGGGCAC
____________________________________________________________
consensus GGAAGAACAACATGAAATTTCGCCCCGATGAGAACTACGTTTGCCTCCTTGATTGGGCAC
. : . : . : . : . : . :
rJMFF019N05+ TTGTTCTTCAAGAAAAAGGAAACTTAATGGAGCTAATAGATCCAAGATTGGGTTCTGATT
rJMFF012M02+ TTGTTCTTCAAGAAAAAGGAAACTTAATGGAGCTAATAGATCCAAGATTGGGTTCTGATT
rJMSF023E11+ TTGTTCTTCAAGAAAATGGTAACCTATTGGAACTAATAGATCCAAGATTGGGTTCTGATT
rJMSF027K20+ TTGTTCTTCAAGAAAAAGGAAACTTAATGGAGCTAATAGATCCAAGATTGGGTTCTGATT
rJMSF045G23+ TTGTTCTTCAAGAAAAAGGAAACTTAATGGAGCTAATAGATCCAAGATTGGGTTCTGATT
____________________________________________________________
consensus TTGTTCTTCAAGAAAAAGGAAACTTAATGGAGCTAATAGATCCAAGATTGGGTTCTGATT
. : . : . : . : . : . :
rJMFF019N05+ TTGACAAAGAACAAGCACTCAAAATGCTCGAAGTAGCTTTGCTATGTACTAATCCTTCAC
rJMFF012M02+ TTGACAAAGAACAAGCACTCAAAATGCTCGAAGTAGCTTTGCTATGTACTAATCCTTCAC
rJMSF023E11+ TTGATAAAGAACAAGCTATCAGAATGATCAAAGTAGCTTTGTTTTG
rJMSF027K20+ TTGACAAAGAACAAGCACTCAAAATGCTCGAAGTAGCTTTGCTATGTACTAATCCTTCAC
rJMSF045G23+ TTGACAAAGAACAAGCACTCAAAATGCTCGAAGTAGCTTTGCTATGTACTAATCCTTCAC
____________________________________________________________
consensus TTGACAAAGAACAAGCACTCAAAATGCTCGAAGTAGCTTTGCTATGTACTAATCCTTCAC
. : . : . : . : . : . :
rJMFF019N05+ CAGTCCTTAGGCCATCTATGTCTA-CAGTTGTTAGCATGCTTGAAGGCAATGGTGATATT
rJMFF012M02+ CAGTCCTTAGGCCATCTATGTCTA-CAGTTGTTAGCATGCTTGAAGGCAATGGTGATATT
rJMSF027K20+ CAGTCCTTAGGCCATCTATGTCTACCAGTTGTTAGCATGCTTGAAGGCAATGGTGATATT
rJMSF045G23+ CAGTCCTTAGGCCATCTATGTCTA-CAGTTGTTAGCATGCTTGAAGGCAATGGTGATATT
____________________________________________________________
consensus CAGTCCTTAGGCCATCTATGTCTA-CAGTTGTTAGCATGCTTGAAGGCAATGGTGATATT
. : . : . : . : . : . :
rJMFF019N05+ CTCGAGTACAAATCC
rJMFF012M02+ CTCGAGTACAAATCC
rJMSF027K20+ CTCGAGTACAAATCCAA
rJMSF045G23+ CTCGAGTACAAATCCAACATACGTGAATTAAATTTCCAAGCAGTGTGAGTTCATTATGAA
____________________________________________________________
consensus CTCGAGTACAAATCCAACATACGTGAATTAAATTTCCAAGCAGTGTGAGTTCATTATGAA
. : . : . : . : . : . :
rJMSF045G23+ GAAATGTCAATTGGCTCAAGTGATTCTCCCAACAAAGTAGACATTTGTTCATAAGCAAAT
____________________________________________________________
consensus GAAATGTCAATTGGCTCAAGTGATTCTCCCAACAAAGTAGACATTTGTTCATAAGCAAAT
. : . : . : . : . : . :
rJMSF045G23+ TAATTGTGAAAAGTTGCATAAAAAATAAAAGAAATTGTATTTTAATGTTGTATGAATCAT
____________________________________________________________
consensus TAATTGTGAAAAGTTGCATAAAAAATAAAAGAAATTGTATTTTAATGTTGTATGAATCAT