Contig 005801:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025B01Sequence467006205 (11)gb|EPS70061.1|5e-07hypothetical protein M569_04699, partial [Genlisea aurea]723005801 (4)emb|CDP14668.1|1e-89unnamed protein product [Coffea canephora]
JMSF012E05Sequence528006262 (2)ref|XP_009784366.1|6e-106PREDICTED: leucine--tRNA ligase, cytoplasmic-like [Nicotiana sylvestris] ref|XP708005801 (4)emb|CDP14668.1|2e-96unnamed protein product [Coffea canephora]
JMSF020G01Sequence643014650ref|XP_011084279.1|7e-65PREDICTED: leucine--tRNA ligase, cytoplasmic [Sesamum indicum]736005801 (4)emb|CDP14668.1|3e-96unnamed protein product [Coffea canephora]
JMSF044C05Sequence733006205 (11)ref|XP_011084279.1|1e-64PREDICTED: leucine--tRNA ligase, cytoplasmic [Sesamum indicum]738005801 (4)emb|CDP14668.1|3e-82unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF012E05+ TCGAGGAACCAAATCTCACCCTCAAAAAGGCTAACAAATATTTGCAAGAT
rJMSF020G01+ GGAACCAAATCTCACCCTCAAAAAGGCTAACAAATATTTGCAAGAT
                      ____________________________________________________________
consensus TCGAGGAACCAAATCTCACCCTCAAAAAGGCTAACAAATATTTGCAAGAT
 
. : . : . : . : . : . :
rJMSF012E05+ TCAATTGTCTCGATGAGGAAGCTCCTGCAGAAACAGGTTTCTGGATCGAAGAAAGGAGGC
rJMSF020G01+ TCAATTGTCTCGATGAGGAAGCTCCTGCAGAAACAGGTTTCTGGATCGAAGAAAGGAGGC
rJMFF025B01+ GATGAGGAAGCTCCTGCAGAAACAGGTTTCTGGATCGAAGAA---AGGC
rJMSF044C05+ GATGAGGAAGCTCCTGCAGAAACAGGTTTCTGGATCGAAGAA---AGGC
                      ____________________________________________________________
consensus TCAATTGTCTCGATGAGGAAGCTCCTGCAGAAACAGGTTTCTGGATCGAAGAAAGGAGGC
 
. : . : . : . : . : . :
rJMSF012E05+ AACATAAATGTGAATAATGCTCAAAACAAACCCACGGTGGGGTTGATATACGTCAATGAG
rJMSF020G01+ AACATAAATGTGAATAATGCTCAAAACAAACCCACGGTGGGGTTGATATACGTCAATGAG
rJMFF025B01+ AACATAAATGTGAA---TGCCCAAAACAAACCCACGGTGGGGTTGATATATGTGAACGAG
rJMSF044C05+ AACATAAATGTGAA---TGCCCAAAACAAACCCACGGTGGGGTTGATATATGTGAACGAG
                      ____________________________________________________________
consensus AACATAAATGTGAATAATGCTCAAAACAAACCCACGGTGGGGTTGATATATGTGAATGAG
 
. : . : . : . : . : . :
rJMSF012E05+ CAATACGATGGGTGGAAAAAGGAGTGTTTGAACATACTCAGGAGGAAATTCGACGAGGCC
rJMSF020G01+ CAATACGATGGGTGGAAAAAGGAGTGTTTGAACATACTCAGGAGGAAATTCGACGAGGCC
rJMFF025B01+ CAATACGATGGGTGGAAAAGGGAGTGTTTGAACATACTCAGGACGAAATTCGACAAGGCC
rJMSF044C05+ CAATACGATGGGTGGAAAAGGGAGTGTTTGAACATACTCAGGACGAAATTCGACAAGGCC
                      ____________________________________________________________
consensus CAATACGATGGGTGGAAAAGGGAGTGTTTGAACATACTCAGGAGGAAATTCGACGAGGCC
 
. : . : . : . : . : . :
rJMSF012E05+ TCAAGCACCTTTTCACCCGACAAAGAAATCCTCGCTGAACTACAGCAGAGCGCAATCGCA
rJMSF020G01+ TCAAGCACCTTTTCACCCGACAAAGAAATCCTCGCTGAACTACAGCAGAGCGCAATCGCA
rJMFF025B01+ TCTCGCACCTTTTCACCCGACAAAGAAATCCTCGCCGAACTACAGCAGAGCGCAATTGCA
rJMSF044C05+ TCTCGCACCTTTTCACCCGACAAAGAAATCCTCGCCGAACTACAGCAGAGCGCAATTGCA
                      ____________________________________________________________
consensus TCTCGCACCTTTTCACCCGACAAAGAAATCCTCGCTGAACTACAGCAGAGCGCAATTGCA
 
. : . : . : . : . : . :
rJMSF012E05+ AAAGAAGGCAATTTCAAACAAATACAGAAGCTATGTATGCCATTCCTGAGATTCAAGAAG
rJMSF020G01+ AAAGAAGGCAATTTCAAACAAATACAGAAGCTATGTATGCCATTCCTGAGATTCAAGAAG
rJMFF025B01+ AAAGAAGGCAATTTCAAGCAAATACAGAAGCTATGCATGCCGTTCCTGAGATTCAAGAAG
rJMSF044C05+ AAAGAAGGCAATTTCAAGCAAATACAGAAGCTATGCATGCCGTTCCTGAGATTCAAGAAG
                      ____________________________________________________________
consensus AAAGAAGGCAATTTCAAGCAAATACAGAAGCTATGTATGCCGTTCCTGAGATTCAAGAAG
 
. : . : . : . : . : . :
rJMSF012E05+ GATGAAGTTATGGGCGTAGGGGTTCAGGCACTGGATCTAAGACTTCCATTTGGCGAGATT
rJMSF020G01+ GATGAAGTTATGGGCGTAGGGGTTCAGGCACTGGATCTAAGACTTCCATTTGGCGAGATT
rJMFF025B01+ GACGAAGTTATGGCCGTTGGGGATCAGGCACTGGATCTAAAGCTTCCATTTGGCGAGATT
rJMSF044C05+ GACGAAGTTATGGCCGTTGGGGATCAGGCACTGGATCTAAAGCTTCCATTTGGCGAGATT
                      ____________________________________________________________
consensus GATGAAGTTATGGGCGTTGGGGTTCAGGCACTGGATCTAAGGCTTCCATTTGGCGAGATT
 
. : . : . : . : . : . :
rJMSF012E05+ GAGGTCCTCCAGACAAACTCAGACTTGATCAAAAGACAGCTTGGTCTTGAAAGATTGGAG
rJMSF020G01+ GAGGTCCTCCAGACAAACTCAGACTTGATCAAAAGACAGCTTGGTCTTGAAAGATTGGAG
rJMFF025B01+ GAGGTCCTAAACACAAACTCAGACTTGATCAAAAGACAGCTTGGTCTTGAAAGAATCGAG
rJMSF044C05+ GAGGTCCTAAACACAAACTCAGACTTGATCAAAAGACAGCTTGGTCTTGAAAGAATCGAG
                      ____________________________________________________________
consensus GAGGTCCTCCAGACAAACTCAGACTTGATCAAAAGACAGCTTGGTCTTGAAAGATTGGAG
 
. : . : . : . : . : . :
rJMSF012E05+ ATTTTGTCTGCTGCAGATCCAAATGCAATTGGAAGAGCCGGTCCTCATGCATCGCTTTTG
rJMSF020G01+ ATTTTGTCTGCTGCAGATCCAAATGCAATTGGAAGAGCCGGTCCTCATGCATCGCTTTTG
rJMFF025B01+ ATTTTGGATGCTGCAGAACCAACTGCAATTGGAAGAGCCGGTCCTCATGCATCGCTTTTG
rJMSF044C05+ ATTTTGGATGCTGCAGAACCAACTGCAATTGGAAGAGCCGGTCCTCATGCATCGCTTTTG
                      ____________________________________________________________
consensus ATTTTGTCTGCTGCAGATCCAACTGCAATTGGAAGAGCCGGTCCTCATGCATCGCTTTTG
 
. : . : . : . : . : . :
rJMSF012E05+ AAACAGAATCCTCCATCACCTGGGAATCCAACCGCAATCTTCATCAACGAGTAAACTCAA
rJMSF020G01+ AAACAGAATCCTCCATCACCTGGGAATCCAACCGCAATCTTCATCAACGAGTAAACTCAA
rJMFF025B01+ AAACAGAATCCGCCATCTCCCGGGAATCCTACCTCAATCTTCATCAATGAGTAAACTCAA
rJMSF044C05+ AAACAGAATCCGCCATCTCCCGGGAATCCTACCTCAATCTTCATCAATGAGTAAACTCAA
                      ____________________________________________________________
consensus AAACAGAATCCTCCATCTCCTGGGAATCCTACCTCAATCTTCATCAATGAGTAAACTCAA
 
. : . : . : . : . : . :
rJMSF012E05+ A
rJMSF020G01+ A
rJMFF025B01+ AGACACAAACTTTTCTATCGCCATTCACATCTGGTTTTAAGTTGTAATTTTGTGGTTTCT
rJMSF044C05+ AGACACAAACTTTTCTATCGCCATTCACATCTGGTTTTAAGTTGTAATTTTGTGGTTTCT
                      ____________________________________________________________
consensus AGACACAAACTTTTCTATCGCCATTCACATCTGGTTTTAAGTTGTAATTTTGTGGTTTCT
 
. : . : . : . : . : . :
rJMFF025B01+ GGGTTTTTGTTAAACCGGATTTCCAGTCTTTACTTTGCTATACTGATTGTTGTTTCATCA
rJMSF044C05+ GGGTTTTTGTTAAACCGGATTTCCAGTCTTTACTTTGCTATACTGATTGTTGTTTCATCA
                      ____________________________________________________________
consensus GGGTTTTTGTTAAACCGGATTTCCAGTCTTTACTTTGCTATACTGATTGTTGTTTCATCA
 
. : . : . : . : . : . :
rJMFF025B01+ TTTTGGATGTTAATTATATTGTAAGCAGACTAGCAATACT
rJMSF044C05+ TTTTGGATGTTAATTATATTGTAAGCAGACTAGCAATACTGTTTTAATCCATTTTGAGAT
                      ____________________________________________________________
consensus TTTTGGATGTTAATTATATTGTAAGCAGACTAGCAATACTGTTTTAATCCATTTTGAGAT