Contig 005801:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025B01Sequence467006205 (11)gb|EPS70061.1|5e-07hypothetical protein M569_04699, partial [Genlisea aurea]723005801 (4)emb|CDP14668.1|1e-89unnamed protein product [Coffea canephora]
JMSF012E05Sequence528006262 (2)ref|XP_009784366.1|6e-106PREDICTED: leucine--tRNA ligase, cytoplasmic-like [Nicotiana sylvestris] ref|XP708005801 (4)emb|CDP14668.1|2e-96unnamed protein product [Coffea canephora]
JMSF020G01Sequence643014650ref|XP_011084279.1|7e-65PREDICTED: leucine--tRNA ligase, cytoplasmic [Sesamum indicum]736005801 (4)emb|CDP14668.1|3e-96unnamed protein product [Coffea canephora]
JMSF044C05Sequence733006205 (11)ref|XP_011084279.1|1e-64PREDICTED: leucine--tRNA ligase, cytoplasmic [Sesamum indicum]738005801 (4)emb|CDP14668.1|3e-82unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF012E05+                    TCGAGGAACCAAATCTCACCCTCAAAAAGGCTAACAAATATTTGCAAGAT
rJMSF020G01+                        GGAACCAAATCTCACCCTCAAAAAGGCTAACAAATATTTGCAAGAT
                      ____________________________________________________________
consensus                       TCGAGGAACCAAATCTCACCCTCAAAAAGGCTAACAAATATTTGCAAGAT
 
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rJMSF012E05+          TCAATTGTCTCGATGAGGAAGCTCCTGCAGAAACAGGTTTCTGGATCGAAGAAAGGAGGC
rJMSF020G01+          TCAATTGTCTCGATGAGGAAGCTCCTGCAGAAACAGGTTTCTGGATCGAAGAAAGGAGGC
rJMFF025B01+                     GATGAGGAAGCTCCTGCAGAAACAGGTTTCTGGATCGAAGAA---AGGC
rJMSF044C05+                     GATGAGGAAGCTCCTGCAGAAACAGGTTTCTGGATCGAAGAA---AGGC
                      ____________________________________________________________
consensus             TCAATTGTCTCGATGAGGAAGCTCCTGCAGAAACAGGTTTCTGGATCGAAGAAAGGAGGC
 
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rJMSF012E05+          AACATAAATGTGAATAATGCTCAAAACAAACCCACGGTGGGGTTGATATACGTCAATGAG
rJMSF020G01+          AACATAAATGTGAATAATGCTCAAAACAAACCCACGGTGGGGTTGATATACGTCAATGAG
rJMFF025B01+          AACATAAATGTGAA---TGCCCAAAACAAACCCACGGTGGGGTTGATATATGTGAACGAG
rJMSF044C05+          AACATAAATGTGAA---TGCCCAAAACAAACCCACGGTGGGGTTGATATATGTGAACGAG
                      ____________________________________________________________
consensus             AACATAAATGTGAATAATGCTCAAAACAAACCCACGGTGGGGTTGATATATGTGAATGAG
 
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rJMSF012E05+          CAATACGATGGGTGGAAAAAGGAGTGTTTGAACATACTCAGGAGGAAATTCGACGAGGCC
rJMSF020G01+          CAATACGATGGGTGGAAAAAGGAGTGTTTGAACATACTCAGGAGGAAATTCGACGAGGCC
rJMFF025B01+          CAATACGATGGGTGGAAAAGGGAGTGTTTGAACATACTCAGGACGAAATTCGACAAGGCC
rJMSF044C05+          CAATACGATGGGTGGAAAAGGGAGTGTTTGAACATACTCAGGACGAAATTCGACAAGGCC
                      ____________________________________________________________
consensus             CAATACGATGGGTGGAAAAGGGAGTGTTTGAACATACTCAGGAGGAAATTCGACGAGGCC
 
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rJMSF012E05+          TCAAGCACCTTTTCACCCGACAAAGAAATCCTCGCTGAACTACAGCAGAGCGCAATCGCA
rJMSF020G01+          TCAAGCACCTTTTCACCCGACAAAGAAATCCTCGCTGAACTACAGCAGAGCGCAATCGCA
rJMFF025B01+          TCTCGCACCTTTTCACCCGACAAAGAAATCCTCGCCGAACTACAGCAGAGCGCAATTGCA
rJMSF044C05+          TCTCGCACCTTTTCACCCGACAAAGAAATCCTCGCCGAACTACAGCAGAGCGCAATTGCA
                      ____________________________________________________________
consensus             TCTCGCACCTTTTCACCCGACAAAGAAATCCTCGCTGAACTACAGCAGAGCGCAATTGCA
 
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rJMSF012E05+          AAAGAAGGCAATTTCAAACAAATACAGAAGCTATGTATGCCATTCCTGAGATTCAAGAAG
rJMSF020G01+          AAAGAAGGCAATTTCAAACAAATACAGAAGCTATGTATGCCATTCCTGAGATTCAAGAAG
rJMFF025B01+          AAAGAAGGCAATTTCAAGCAAATACAGAAGCTATGCATGCCGTTCCTGAGATTCAAGAAG
rJMSF044C05+          AAAGAAGGCAATTTCAAGCAAATACAGAAGCTATGCATGCCGTTCCTGAGATTCAAGAAG
                      ____________________________________________________________
consensus             AAAGAAGGCAATTTCAAGCAAATACAGAAGCTATGTATGCCGTTCCTGAGATTCAAGAAG
 
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rJMSF012E05+          GATGAAGTTATGGGCGTAGGGGTTCAGGCACTGGATCTAAGACTTCCATTTGGCGAGATT
rJMSF020G01+          GATGAAGTTATGGGCGTAGGGGTTCAGGCACTGGATCTAAGACTTCCATTTGGCGAGATT
rJMFF025B01+          GACGAAGTTATGGCCGTTGGGGATCAGGCACTGGATCTAAAGCTTCCATTTGGCGAGATT
rJMSF044C05+          GACGAAGTTATGGCCGTTGGGGATCAGGCACTGGATCTAAAGCTTCCATTTGGCGAGATT
                      ____________________________________________________________
consensus             GATGAAGTTATGGGCGTTGGGGTTCAGGCACTGGATCTAAGGCTTCCATTTGGCGAGATT
 
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rJMSF012E05+          GAGGTCCTCCAGACAAACTCAGACTTGATCAAAAGACAGCTTGGTCTTGAAAGATTGGAG
rJMSF020G01+          GAGGTCCTCCAGACAAACTCAGACTTGATCAAAAGACAGCTTGGTCTTGAAAGATTGGAG
rJMFF025B01+          GAGGTCCTAAACACAAACTCAGACTTGATCAAAAGACAGCTTGGTCTTGAAAGAATCGAG
rJMSF044C05+          GAGGTCCTAAACACAAACTCAGACTTGATCAAAAGACAGCTTGGTCTTGAAAGAATCGAG
                      ____________________________________________________________
consensus             GAGGTCCTCCAGACAAACTCAGACTTGATCAAAAGACAGCTTGGTCTTGAAAGATTGGAG
 
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rJMSF012E05+          ATTTTGTCTGCTGCAGATCCAAATGCAATTGGAAGAGCCGGTCCTCATGCATCGCTTTTG
rJMSF020G01+          ATTTTGTCTGCTGCAGATCCAAATGCAATTGGAAGAGCCGGTCCTCATGCATCGCTTTTG
rJMFF025B01+          ATTTTGGATGCTGCAGAACCAACTGCAATTGGAAGAGCCGGTCCTCATGCATCGCTTTTG
rJMSF044C05+          ATTTTGGATGCTGCAGAACCAACTGCAATTGGAAGAGCCGGTCCTCATGCATCGCTTTTG
                      ____________________________________________________________
consensus             ATTTTGTCTGCTGCAGATCCAACTGCAATTGGAAGAGCCGGTCCTCATGCATCGCTTTTG
 
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rJMSF012E05+          AAACAGAATCCTCCATCACCTGGGAATCCAACCGCAATCTTCATCAACGAGTAAACTCAA
rJMSF020G01+          AAACAGAATCCTCCATCACCTGGGAATCCAACCGCAATCTTCATCAACGAGTAAACTCAA
rJMFF025B01+          AAACAGAATCCGCCATCTCCCGGGAATCCTACCTCAATCTTCATCAATGAGTAAACTCAA
rJMSF044C05+          AAACAGAATCCGCCATCTCCCGGGAATCCTACCTCAATCTTCATCAATGAGTAAACTCAA
                      ____________________________________________________________
consensus             AAACAGAATCCTCCATCTCCTGGGAATCCTACCTCAATCTTCATCAATGAGTAAACTCAA
 
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rJMSF012E05+          A                                                           
rJMSF020G01+          A                                                           
rJMFF025B01+          AGACACAAACTTTTCTATCGCCATTCACATCTGGTTTTAAGTTGTAATTTTGTGGTTTCT
rJMSF044C05+          AGACACAAACTTTTCTATCGCCATTCACATCTGGTTTTAAGTTGTAATTTTGTGGTTTCT
                      ____________________________________________________________
consensus             AGACACAAACTTTTCTATCGCCATTCACATCTGGTTTTAAGTTGTAATTTTGTGGTTTCT
 
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rJMFF025B01+          GGGTTTTTGTTAAACCGGATTTCCAGTCTTTACTTTGCTATACTGATTGTTGTTTCATCA
rJMSF044C05+          GGGTTTTTGTTAAACCGGATTTCCAGTCTTTACTTTGCTATACTGATTGTTGTTTCATCA
                      ____________________________________________________________
consensus             GGGTTTTTGTTAAACCGGATTTCCAGTCTTTACTTTGCTATACTGATTGTTGTTTCATCA
 
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rJMFF025B01+          TTTTGGATGTTAATTATATTGTAAGCAGACTAGCAATACT                    
rJMSF044C05+          TTTTGGATGTTAATTATATTGTAAGCAGACTAGCAATACTGTTTTAATCCATTTTGAGAT
                      ____________________________________________________________
consensus             TTTTGGATGTTAATTATATTGTAAGCAGACTAGCAATACTGTTTTAATCCATTTTGAGAT