Contig 005796:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007H13Sequence475010862 (4)678005796 (3)ref|XP_006345371.1|3e-67PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Solanum tuberosum]
JMSF010E15Sequence247010862 (4)739005796 (3)ref|XP_006345371.1|3e-85PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Solanum tuberosum]
JMSF042O05Sequence761010862 (4)ref|XP_009605007.1|9e-15PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Nicotiana tomentosifo592005796 (3)ref|XP_006345371.1|2e-59PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF010E15+ TGTTCAGCCATTCCTTTTAC
                      ____________________________________________________________
consensus TGTTCAGCCATTCCTTTTAC
 
. : . : . : . : . : . :
rJMSF007H13+ CTCATATGAAGCTGTACATACTATTCAAGACGCTCTTCATCTG-TTT
rJMSF010E15+ TCCACCTTGATATCTCATATGAAGCTGTACATACTATTCAAGACGCTCTTCATCTGTTTT
                      ____________________________________________________________
consensus TCCACCTTGATATCTCATATGAAGCTGTACATACTATTCAAGACGCTCTTCATCTGTTTT
 
. : . : . : . : . : . :
rJMSF007H13+ CAGCCCCTGAGACACTTGAGGAGTACCGAACATCNCCAATGGGGAAGGCTGAAATAGGGA
rJMSF010E15+ CAGCCCCTGAGACACTTGAGGAGTACCGAACATCACCAATGGGGAAGGCTGAAATAGGGA
                      ____________________________________________________________
consensus CAGCCCCTGAGACACTTGAGGAGTACCGAACATCACCAATGGGGAAGGCTGAAATAGGGA
 
. : . : . : . : . : . :
rJMSF007H13+ CTGCCAAAAAATCTATTAGCATACAAGCACTTCCCAGGATCATGATTTTACACTTGAAGC
rJMSF010E15+ CTGCCAAAAAATCTATTAGCATACAAGCACTTCCCAGGATCATGATTTTACACTTGAAGC
rJMSF042O05+ AAAATCTATTAGCATACAAGCACTTCCCAGGATCATGATTTTACACTTGAAGC
                      ____________________________________________________________
consensus CTGCCAAAAAATCTATTAGCATACAAGCACTTCCCAGGATCATGATTTTACACTTGAAGC
 
. : . : . : . : . : . :
rJMSF007H13+ GGTTTGGCTATGGAAGTCATGGAAGCACCAAATTGCATAAACCAGTGCAGTTTCCACTTG
rJMSF010E15+ GGTTTGGCTATGGAAGTCATGGAAGCACCAAATTGCATAAACCAGTGCAGTTTCCACTTG
rJMSF042O05+ GGTTTGGCTATGGAAGTCATGGAAGCACCAAATTGCATAAACCAGTGCAGTTTCCACTTG
                      ____________________________________________________________
consensus GGTTTGGCTATGGAAGTCATGGAAGCACCAAATTGCATAAACCAGTGCAGTTTCCACTTG
 
. : . : . : . : . : . :
rJMSF007H13+ AACTGGTGATAAGCCGTGATTTACTTGCTGCTTCAANTAATGAGAGTCGGAAATACGAGC
rJMSF010E15+ AACTGGTGATAAGCCGTGATTTACTTGCTGCTTCAACTAATGAGAGTCGGAAATACGAGC
rJMSF042O05+ AACTGGTGATAAGCCGTGATTTACTTGCTGCTTCAACTAATGAGAGTCGGAAATACGAGC
                      ____________________________________________________________
consensus AACTGGTGATAAGCCGTGATTTACTTGCTGCTTCAACTAATGAGAGTCGGAAATACGAGC
 
. : . : . : . : . : . :
rJMSF007H13+ TAGTTTCCACAATAACCCACCATGGGAGGGAAGCATCAAGGGGACACTATACTGCTGACT
rJMSF010E15+ TAGTTTCCACAATAACCCACCATGGGAGGGAAGCATCAAGGGGACACTATACTGCTGACT
rJMSF042O05+ TAGTTTCCACAATAACCCACCATGGGAGGGAAGCATCAAGGGGACACTATACTGCTGACT
                      ____________________________________________________________
consensus TAGTTTCCACAATAACCCACCATGGGAGGGAAGCATCAAGGGGACACTATACTGCTGACT
 
. : . : . : . : . : . :
rJMSF007H13+ GCCGCTACCCTTGTGGGAAATGGTTACGGTTTGATGATGCCACCGTTACTGCTGTCAGCA
rJMSF010E15+ GCCGCTACCCTTGTGGGAAATGGTTACGGTTTGATGATGCCACCGTTACTGCTGTCAGCA
rJMSF042O05+ GCCGCTACCCTTGTGGGAAATGGTTACGGTTTGATGATGCCACCGTTACTGCTGTCAGCA
                      ____________________________________________________________
consensus GCCGCTACCCTTGTGGGAAATGGTTACGGTTTGATGATGCCACCGTTACTGCTGTCAGCA
 
. : . : . : . : . : . :
rJMSF007H13+ CCATCAAGGTGCTGCATGACCAGGCTTACATTCTTTTCTACAGACAAATATAGAAGATCA
rJMSF010E15+ CCATCAAGGTGCTGCATGACCAGGCTTACATTCTTTTCTACAGACAAATATAGAAGATCA
rJMSF042O05+ CCATCAAGGTGCTGCATGACCAGGCTTACATTCTTTTCTACAGACAAATATAGAAGATCA
                      ____________________________________________________________
consensus CCATCAAGGTGCTGCATGACCAGGCTTACATTCTTTTCTACAGACAAATATAGAAGATCA
 
. : . : . : . : . : . :
rJMSF007H13+ ACGACAATTACACAGTAACAATACAAGGAAAAGAATGCATGCCGATGCTGAGGAGTACAA
rJMSF010E15+ ACGACAATTACACAGTAACAATACAAGGAAAAGAATGCATGCCGATGCTGAGGAGTACAA
rJMSF042O05+ ACGACAATTACACAGTAACAATACAAGGAAAAGAATGCATGCCGATGCTGAGGAGTACAA
                      ____________________________________________________________
consensus ACGACAATTACACAGTAACAATACAAGGAAAAGAATGCATGCCGATGCTGAGGAGTACAA
 
. : . : . : . : . : . :
rJMSF007H13+ ACCAGGTACTTGGCGATTCCCAAAGTGCAGTGTCTACTCTATCTCAAAGATATATGATGA
rJMSF010E15+ ACCAGGTACTTGGCGATTCCCAAAGTGCAGTGTCTACTCTATCTCAAAGATATTTGATGA
rJMSF042O05+ ACCAGGTACTTGGCGATTCCCAAAGTGCAGTGTCTACTCTATCTCAAAGATATATGATGA
                      ____________________________________________________________
consensus ACCAGGTACTTGGCGATTCCCAAAGTGCAGTGTCTACTCTATCTCAAAGATATATGATGA
 
. : . : . : . : . : . :
rJMSF007H13+ ATTTAGTTAACACTTGTATTTGCTTGCCTACAATCGAATGAGATATATTATCCAGTNCCT
rJMSF010E15+ ATTTAGTTAACACTTGTATTTGCTTGCCTACAATCGAATGAGATATATTATCCAGTGCCT
rJMSF042O05+ ATTTAGTTAACACTTGTATTTGCTTGCCTACAATCGAATGAGATATATTATCCAGTGCCT
                      ____________________________________________________________
consensus ATTTAGTTAACACTTGTATTTGCTTGCCTACAATCGAATGAGATATATTATCCAGTGCCT
 
. : . : . : . : . : . :
rJMSF007H13+ GTTAGGAGACAGATTTAAC
rJMSF010E15+ GTTAGGAGACAGATTTAACCATGTACTAGCAATTTTGTTACTATTTATGTAT
rJMSF042O05+ GTTAGGAGACAGATTTAA-CATGTACTAGCAATTTTGTTACTATTTATGTATTGAACCTT
                      ____________________________________________________________
consensus GTTAGGAGACAGATTTAACCATGTACTAGCAATTTTGTTACTATTTATGTATTGAACCTT