Contig 005794:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF034I22Sequence668006674 (2)ref|XP_011101964.1|5e-88PREDICTED: RING finger protein B-like isoform X2 [Sesamum indicum]644005794 (2)
JMSF042L20Sequence806006674 (2)gb|EYU18032.1|4e-121hypothetical protein MIMGU_mgv1a005596mg [Erythranthe guttata]663005794 (2)

Alignment

This contig is upended


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rJMSF034I22+                 CAAACAGGAGATGCTACAGCTGGAATCAGAAACCCACCCACCACAGATGCTTC
                      ____________________________________________________________
consensus                    CAAACAGGAGATGCTACAGCTGGAATCAGAAACCCACCCACCACAGATGCTTC
 
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rJMSF034I22+          ACTGTCCCAGGAGCTCCCTGGAACCTCAAAACTATTTGCGGAACCTGAACCCAATTTGGA
rJMSF042L20+                                                                   GGA
                      ____________________________________________________________
consensus             ACTGTCCCAGGAGCTCCCTGGAACCTCAAAACTATTTGCGGAACCTGAACCCAATTTGGA
 
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rJMSF034I22+          AACTAGTGAGGCAAATAACGCACCTAGGTCTATTGCTGATCTCTCTAAGGAGAATACTTC
rJMSF042L20+          AACTAGTGAGGCAAATAACGCACCTAGGTCTATTGCTGATCTCTCTAAGGAGAATACTTC
                      ____________________________________________________________
consensus             AACTAGTGAGGCAAATAACGCACCTAGGTCTATTGCTGATCTCTCTAAGGAGAATACTTC
 
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rJMSF034I22+          CATTGCTGAGAATAACACCACTCTATCCTTAAACTAAGGTCTTCAGGATAGTTTTTGACG
rJMSF042L20+          CATTGCTGAGAATAACACCACTCTATCCTTAAACTAAGGTCTTCAGGATAGTTTTTGACG
                      ____________________________________________________________
consensus             CATTGCTGAGAATAACACCACTCTATCCTTAAACTAAGGTCTTCAGGATAGTTTTTGACG
 
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rJMSF034I22+          GTAGAAATTAACAAATTGTACAGTTAGAGACGGGATCATGGAGGATCTTACTTGCCAAGT
rJMSF042L20+          GTAGAAATTAACAAATTGTACAGTTAGAGACGGGATCATGGAGGATCTTACTTGCCAAGT
                      ____________________________________________________________
consensus             GTAGAAATTAACAAATTGTACAGTTAGAGACGGGATCATGGAGGATCTTACTTGCCAAGT
 
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rJMSF034I22+          GTGAAGGAATTAATTATTCTACGATAGGGATGACCAGTTTGGTTGTATCGAGGTTCCTCC
rJMSF042L20+          GTGAAGGAATTAATTATTCTACGATAGGGATGACCAGTTTGGTTGTATCGAGGTTCCTCC
                      ____________________________________________________________
consensus             GTGAAGGAATTAATTATTCTACGATAGGGATGACCAGTTTGGTTGTATCGAGGTTCCTCC
 
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rJMSF034I22+          CAACGGTGGTGATTATTTCTGTTCTGACTTTACATCTTCATCCCACGGATAGGGGTGGCA
rJMSF042L20+          CAACGGTGGTGATTATTTCTGTTCTGACTTTACATCTTCATCCCACGGATAGGGGTGGCA
                      ____________________________________________________________
consensus             CAACGGTGGTGATTATTTCTGTTCTGACTTTACATCTTCATCCCACGGATAGGGGTGGCA
 
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rJMSF034I22+          TATCTTGAACCACCCGCCCGCTTCCCTTCCTCGTTTTCCTGGGCTGAAAGTGTGACTTGA
rJMSF042L20+          TATCTTGAACCACCCGCCCGCTTCCCTTCCTCGTTTTCCTGGGCTGAAAGTGTGACTTGA
                      ____________________________________________________________
consensus             TATCTTGAACCACCCGCCCGCTTCCCTTCCTCGTTTTCCTGGGCTGAAAGTGTGACTTGA
 
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rJMSF034I22+          ACCCTTTGATGTTGTTTTTGCTGGTGGTTGGTGACACCCAACCTAGTCCTCTTACCTTTG
rJMSF042L20+          ACCCTTTGATGTTGTTTTTGCTGGTGGTTGGTGACACCCAACCTAGTCCTCTTACCTTTG
                      ____________________________________________________________
consensus             ACCCTTTGATGTTGTTTTTGCTGGTGGTTGGTGACACCCAACCTAGTCCTCTTACCTTTG
 
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rJMSF034I22+          ACTTCTAGGTTGTTCAAAATTGTGATCAGTGCTATTATTAGCTACCTTTTTCCAGGAGCA
rJMSF042L20+          ACTTCTAGGTTGTTCAAAATTGTGATCAGTGCTATTATTAGCTACCTTTTTCCAGGAGCA
                      ____________________________________________________________
consensus             ACTTCTAGGTTGTTCAAAATTGTGATCAGTGCTATTATTAGCTACCTTTTTCCAGGAGCA
 
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rJMSF034I22+          CTATTTTGGATACTGAATTTCTCTAATGTTTAGTTTGTTTATTCATAGTGT         
rJMSF042L20+          CTATTTTGGATACTGAATTTCTCTAATGTTTAGTTTGTTTATTCATAGTGTTGGTCAACC
                      ____________________________________________________________
consensus             CTATTTTGGATACTGAATTTCTCTAATGTTTAGTTTGTTTATTCATAGTGTTGGTCAACC
 
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rJMSF042L20+          TGAATTAGATAATCTTGTATAAATGTGGATTCTACTATCCCAATCTTGAGATTGTGAGTA
                      ____________________________________________________________
consensus             TGAATTAGATAATCTTGTATAAATGTGGATTCTACTATCCCAATCTTGAGATTGTGAGTA
 
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rJMSF042L20+          TACCTCATCAACCATAATGGATAACTAATCTCAGGTGGAAGGGAACTGATTCACTCAGAA
                      ____________________________________________________________
consensus             TACCTCATCAACCATAATGGATAACTAATCTCAGGTGGAAGGGAACTGATTCACTCAGAA