Contig 005788:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040J19Sequence484013510 (2)ref|XP_006339533.1|4e-19PREDICTED: bifunctional protein FolD 4, chloroplastic-like [Solanum tuberosum]673005788 (2)ref|XP_009795120.1|9e-82PREDICTED: bifunctional protein FolD 4, chloroplastic-like [Nicotiana sylvestri
JMSF042B14Sequence526013510 (2)ref|XP_006339533.1|1e-28PREDICTED: bifunctional protein FolD 4, chloroplastic-like [Solanum tuberosum]625005788 (2)ref|XP_009795120.1|4e-75PREDICTED: bifunctional protein FolD 4, chloroplastic-like [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF040J19+ CCAAAGGGATGCATCGAGTTGCTGCATAGGTATGGTATTG
                      ____________________________________________________________
consensus CCAAAGGGATGCATCGAGTTGCTGCATAGGTATGGTATTG
 
. : . : . : . : . : . :
rJMFF040J19+ GAATCAAGGGGAAAAAGAGCTGTTGTCATTGGCCGGAGTAATATTGTTGGAATGCCTGCT
rJMSF042B14+ GAGTAATATTGTTGGAATGCCTGCT
                      ____________________________________________________________
consensus GAATCAAGGGGAAAAAGAGCTGTTGTCATTGGCCGGAGTAATATTGTTGGAATGCCTGCT
 
. : . : . : . : . : . :
rJMFF040J19+ GCTCTGCTTCTGCAAAGGGAAGATGCTACTGTCAGTATCGTGCATTCCAGAACAAAGGAC
rJMSF042B14+ GCTCTGCTTCTGCAAAGGGAAGATGCTACTGTCAGTATCGTGCATTCCAGAACAAAGGAC
                      ____________________________________________________________
consensus GCTCTGCTTCTGCAAAGGGAAGATGCTACTGTCAGTATCGTGCATTCCAGAACAAAGGAC
 
. : . : . : . : . : . :
rJMFF040J19+ CCCGAGGAAATTACAAAACAAGCAGATATCATAATTGCAGCCGTGGGGCAGCCAAACATG
rJMSF042B14+ CCCGAGGAAATTACAAAACAAGCAGATATCATAATTGCAGCCGTGGGGCAGCCAAACATG
                      ____________________________________________________________
consensus CCCGAGGAAATTACAAAACAAGCAGATATCATAATTGCAGCCGTGGGGCAGCCAAACATG
 
. : . : . : . : . : . :
rJMFF040J19+ GTCCGAGGTAGCTGGATCAAGCCTGGTGCCGTTATCATTGACGTTGGAATTAATCCAGTT
rJMSF042B14+ GTCCGAGGTAGCTGGATCAAGCCTGGTGCCGTTATCATTGACGTTGGAATTAATCCAGTT
                      ____________________________________________________________
consensus GTCCGAGGTAGCTGGATCAAGCCTGGTGCCGTTATCATTGACGTTGGAATTAATCCAGTT
 
. : . : . : . : . : . :
rJMFF040J19+ GAGGACACTACAAATCCCCGTGGCTATCGACTTGTAGGAGATGTTTGCTATGAGGAGGCC
rJMSF042B14+ GAGGACACTACAAATCCCCGTGGCTATCGACTTGTAGGAGATGTTTGCTATGAGGAGGCC
                      ____________________________________________________________
consensus GAGGACACTACAAATCCCCGTGGCTATCGACTTGTAGGAGATGTTTGCTATGAGGAGGCC
 
. : . : . : . : . : . :
rJMFF040J19+ AGCAAGGTTGCTTCAGCTATAACTCCGGTTCCTGGAGGCGTCGGGCCAATGACTATAGCT
rJMSF042B14+ AGCAAGGTTGCTTCAGCTATAACTCCGGTTCCTGGAGGCGTCGGGCCAATGACTATAGCT
                      ____________________________________________________________
consensus AGCAAGGTTGCTTCAGCTATAACTCCGGTTCCTGGAGGCGTCGGGCCAATGACTATAGCT
 
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rJMFF040J19+ ATGCTTCTTTCCAACACACTTATATCAGCCAAGCGAATTCACAACTTGAAATGAGATTTT
rJMSF042B14+ ATGCTTCTTTCCAACACACTTATATCAGCCAAGCGAATTCACAACTTGAAATGAGATTTT
                      ____________________________________________________________
consensus ATGCTTCTTTCCAACACACTTATATCAGCCAAGCGAATTCACAACTTGAAATGAGATTTT
 
. : . : . : . : . : . :
rJMFF040J19+ GACATTGCTTCACTGGCTAGGTCTAACATCAAGTGCAAATAATCTGGATGGGTGGTAAAC
rJMSF042B14+ GACATTGCTTCACTGGCTAGGTCTAACATCAAGTGCAAATAATCTGGATGGGTGGTAAAC
                      ____________________________________________________________
consensus GACATTGCTTCACTGGCTAGGTCTAACATCAAGTGCAAATAATCTGGATGGGTGGTAAAC
 
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rJMFF040J19+ TGGAGACCCAAGAACCAACTTGCATCACAGCCATCAAATTCATCAACTGTCACACTCATG
rJMSF042B14+ TGGAGACCCAAGAACCAACTTGCATCACAGCCATCAAATTCATCAACTGTCACACTCATG
                      ____________________________________________________________
consensus TGGAGACCCAAGAACCAACTTGCATCACAGCCATCAAATTCATCAACTGTCACACTCATG
 
. : . : . : . : . : . :
rJMFF040J19+ AGAATGGTCGTGTTGAAATTTTGAATGATATATATGAGAAAAAAATGTTTGTGCGATTTA
rJMSF042B14+ TGAATGGTCGTGTTGAAATTTTGAATGATATATATGAGAAAAAAATGTTTGTGCGATTTA
                      ____________________________________________________________
consensus TGAATGGTCGTGTTGAAATTTTGAATGATATATATGAGAAAAAAATGTTTGTGCGATTTA
 
. : . : . : . : . : . :
rJMFF040J19+ AACAGCTCCATAGAATTTCAGACNGTAATAAAA
rJMSF042B14+ AACAGCTCCATAGAATTTCAGACTGTAATAAAATATATATGTACAATTTGTGGAATTATT
                      ____________________________________________________________
consensus AACAGCTCCATAGAATTTCAGACTGTAATAAAATATATATGTACAATTTGTGGAATTATT