clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF040J19 | Sequence | 484 | 013510 (2) | ref|XP_006339533.1| | 4e-19 | PREDICTED: bifunctional protein FolD 4, chloroplastic-like [Solanum tuberosum] | 673 | 005788 (2) | ref|XP_009795120.1| | 9e-82 | PREDICTED: bifunctional protein FolD 4, chloroplastic-like [Nicotiana sylvestri |
JMSF042B14 | Sequence | 526 | 013510 (2) | ref|XP_006339533.1| | 1e-28 | PREDICTED: bifunctional protein FolD 4, chloroplastic-like [Solanum tuberosum] | 625 | 005788 (2) | ref|XP_009795120.1| | 4e-75 | PREDICTED: bifunctional protein FolD 4, chloroplastic-like [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
rJMFF040J19+ CCAAAGGGATGCATCGAGTTGCTGCATAGGTATGGTATTG
____________________________________________________________
consensus CCAAAGGGATGCATCGAGTTGCTGCATAGGTATGGTATTG
. : . : . : . : . : . :
rJMFF040J19+ GAATCAAGGGGAAAAAGAGCTGTTGTCATTGGCCGGAGTAATATTGTTGGAATGCCTGCT
rJMSF042B14+ GAGTAATATTGTTGGAATGCCTGCT
____________________________________________________________
consensus GAATCAAGGGGAAAAAGAGCTGTTGTCATTGGCCGGAGTAATATTGTTGGAATGCCTGCT
. : . : . : . : . : . :
rJMFF040J19+ GCTCTGCTTCTGCAAAGGGAAGATGCTACTGTCAGTATCGTGCATTCCAGAACAAAGGAC
rJMSF042B14+ GCTCTGCTTCTGCAAAGGGAAGATGCTACTGTCAGTATCGTGCATTCCAGAACAAAGGAC
____________________________________________________________
consensus GCTCTGCTTCTGCAAAGGGAAGATGCTACTGTCAGTATCGTGCATTCCAGAACAAAGGAC
. : . : . : . : . : . :
rJMFF040J19+ CCCGAGGAAATTACAAAACAAGCAGATATCATAATTGCAGCCGTGGGGCAGCCAAACATG
rJMSF042B14+ CCCGAGGAAATTACAAAACAAGCAGATATCATAATTGCAGCCGTGGGGCAGCCAAACATG
____________________________________________________________
consensus CCCGAGGAAATTACAAAACAAGCAGATATCATAATTGCAGCCGTGGGGCAGCCAAACATG
. : . : . : . : . : . :
rJMFF040J19+ GTCCGAGGTAGCTGGATCAAGCCTGGTGCCGTTATCATTGACGTTGGAATTAATCCAGTT
rJMSF042B14+ GTCCGAGGTAGCTGGATCAAGCCTGGTGCCGTTATCATTGACGTTGGAATTAATCCAGTT
____________________________________________________________
consensus GTCCGAGGTAGCTGGATCAAGCCTGGTGCCGTTATCATTGACGTTGGAATTAATCCAGTT
. : . : . : . : . : . :
rJMFF040J19+ GAGGACACTACAAATCCCCGTGGCTATCGACTTGTAGGAGATGTTTGCTATGAGGAGGCC
rJMSF042B14+ GAGGACACTACAAATCCCCGTGGCTATCGACTTGTAGGAGATGTTTGCTATGAGGAGGCC
____________________________________________________________
consensus GAGGACACTACAAATCCCCGTGGCTATCGACTTGTAGGAGATGTTTGCTATGAGGAGGCC
. : . : . : . : . : . :
rJMFF040J19+ AGCAAGGTTGCTTCAGCTATAACTCCGGTTCCTGGAGGCGTCGGGCCAATGACTATAGCT
rJMSF042B14+ AGCAAGGTTGCTTCAGCTATAACTCCGGTTCCTGGAGGCGTCGGGCCAATGACTATAGCT
____________________________________________________________
consensus AGCAAGGTTGCTTCAGCTATAACTCCGGTTCCTGGAGGCGTCGGGCCAATGACTATAGCT
. : . : . : . : . : . :
rJMFF040J19+ ATGCTTCTTTCCAACACACTTATATCAGCCAAGCGAATTCACAACTTGAAATGAGATTTT
rJMSF042B14+ ATGCTTCTTTCCAACACACTTATATCAGCCAAGCGAATTCACAACTTGAAATGAGATTTT
____________________________________________________________
consensus ATGCTTCTTTCCAACACACTTATATCAGCCAAGCGAATTCACAACTTGAAATGAGATTTT
. : . : . : . : . : . :
rJMFF040J19+ GACATTGCTTCACTGGCTAGGTCTAACATCAAGTGCAAATAATCTGGATGGGTGGTAAAC
rJMSF042B14+ GACATTGCTTCACTGGCTAGGTCTAACATCAAGTGCAAATAATCTGGATGGGTGGTAAAC
____________________________________________________________
consensus GACATTGCTTCACTGGCTAGGTCTAACATCAAGTGCAAATAATCTGGATGGGTGGTAAAC
. : . : . : . : . : . :
rJMFF040J19+ TGGAGACCCAAGAACCAACTTGCATCACAGCCATCAAATTCATCAACTGTCACACTCATG
rJMSF042B14+ TGGAGACCCAAGAACCAACTTGCATCACAGCCATCAAATTCATCAACTGTCACACTCATG
____________________________________________________________
consensus TGGAGACCCAAGAACCAACTTGCATCACAGCCATCAAATTCATCAACTGTCACACTCATG
. : . : . : . : . : . :
rJMFF040J19+ AGAATGGTCGTGTTGAAATTTTGAATGATATATATGAGAAAAAAATGTTTGTGCGATTTA
rJMSF042B14+ TGAATGGTCGTGTTGAAATTTTGAATGATATATATGAGAAAAAAATGTTTGTGCGATTTA
____________________________________________________________
consensus TGAATGGTCGTGTTGAAATTTTGAATGATATATATGAGAAAAAAATGTTTGTGCGATTTA
. : . : . : . : . : . :
rJMFF040J19+ AACAGCTCCATAGAATTTCAGACNGTAATAAAA
rJMSF042B14+ AACAGCTCCATAGAATTTCAGACTGTAATAAAATATATATGTACAATTTGTGGAATTATT
____________________________________________________________
consensus AACAGCTCCATAGAATTTCAGACTGTAATAAAATATATATGTACAATTTGTGGAATTATT