Contig 005787:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF019K23+                               GATCGATGAAGGAATTTCTTCGACAGCAAAGAACAGAAG
                      ____________________________________________________________
consensus                                  GATCGATGAAGGAATTTCTTCGACAGCAAAGAACAGAAG
 
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rJMSF019K23+          ACCATGTAGCGATAACATAATCTTTGCCGTCGCTGCATGGTGTATTTGGAAATGGCGTAA
                      ____________________________________________________________
consensus             ACCATGTAGCGATAACATAATCTTTGCCGTCGCTGCATGGTGTATTTGGAAATGGCGTAA
 
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rJMSF019K23+          TGAAGCTTTNTTCAACGGAACTATCAAAGAGCTTAACTCAAAAATCCTTTCCATTAGATC
                      ____________________________________________________________
consensus             TGAAGCTTTNTTCAACGGAACTATCAAAGAGCTTAACTCAAAAATCCTTTCCATTAGATC
 
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rJMSF019K23+          CCAAGCAGAGGACATCAGTAGAGCCTTTGCTAGAGAAAGAGGTCCCCATTCAATTGAAAG
rJMSF041N21+                                                              ATTGAAAG
                      ____________________________________________________________
consensus             CCAAGCAGAGGACATCAGTAGAGCCTTTGCTAGAGAAAGAGGTCCCCATTCAATTGAAAG
 
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rJMSF019K23+          GATATGATCTGGAAGCAACTATGCTGGGAAAAGCCGAGGGAAGGAATTGTTAAACTAAAC
rJMSF041N21+          GATATGATCTGGAAGCAACTATGCTGGGAAAAGCCGAGGGAAGGAATTGTTAAACTAAAC
                      ____________________________________________________________
consensus             GATATGATCTGGAAGCAACTATGCTGGGAAAAGCCGAGGGAAGGAATTGTTAAACTAAAC
 
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rJMSF019K23+          GTAGATGGATCCGTGTCCTCAAGCTCTCAATCAGCCGGCTGTGGTGGAGCTATTAGAGAC
rJMSF041N21+          GTAGATGGATCCGTGTCCTCAAGCTCTCAATCAGCCGGCTGTGGTGGAGCTATTAGAGAC
                      ____________________________________________________________
consensus             GTAGATGGATCCGTGTCCTCAAGCTCTCAATCAGCCGGCTGTGGTGGAGCTATTAGAGAC
 
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rJMSF019K23+          CATAATGGGAGGTGGAAGAGAGGCTTCCTTGCATCTTTTAAGTCCTGTACTCCATTTGAA
rJMSF041N21+          CATAATGGGAGGTGGAAGAGAGGCTTCCTTGCATCTTTTAAGTCCTGTACTCCATTTGAA
                      ____________________________________________________________
consensus             CATAATGGGAGGTGGAAGAGAGGCTTCCTTGCATCTTTTAAGTCCTGTACTCCATTTGAA
 
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rJMSF019K23+          TCAGAAGCTTGGGCAATCCTCAAAGGTATCCAACTACTAGCGTCTATGAAGTATTCCCAT
rJMSF041N21+          TCAGAAGCTTGGGCAATCCTCAAAGGTATCCAACTACTAGCGTCTATGAAGTATTCCCAT
                      ____________________________________________________________
consensus             TCAGAAGCTTGGGCAATCCTCAAAGGTATCCAACTACTAGCGTCTATGAAGTATTCCCAT
 
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rJMSF019K23+          GCTATTATAGAAAGTGATTCTGCAGAGGCGGTGGAGTACATTAACTCTACCAGGATACCA
rJMSF041N21+          GCTATTATAGAAAGTGATTCTGCAGAGGCGGTGGAGTACATTAACTCTACCAGGATACCA
                      ____________________________________________________________
consensus             GCTATTATAGAAAGTGATTCTGCAGAGGCGGTGGAGTACATTAACTCTACCAGGATACCA
 
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rJMSF019K23+          TCAATTGCTGGCCACAACATCCTAGAGGCCTGCAAACGTGAGGTTCGCTCCTTTGAATTC
rJMSF041N21+          TCAATTGCTGGCCACAACATCCTAGAGGCCTGCAAACGTGAGGTTCGCTCCTTTGAATTC
                      ____________________________________________________________
consensus             TCAATTGCTGGCCACAACATCCTAGAGGCCTGCAAACGTGAGGTTCGCTCCTTTGAATTC
 
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rJMSF019K23+          TGCCAGTTCAAGTTTATCCCTCGTGAAATCAACTGCGTGGCAGATTGTCTAGCTCGTCTG
rJMSF041N21+          TGCCAGTTCAAGTTTATCCCTCGTGAAATCAACTGCGTGGCAGATTGTCTAGCTCGTCTG
                      ____________________________________________________________
consensus             TGCCAGTTCAAGTTTATCCCTCGTGAAATCAACTGCGTGGCAGATTGTCTAGCTCGTCTG
 
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rJMSF019K23+          GCAAGATTACAAGCTGCAAGTTTCCAGACTTTACTTGACCCTCCAGCAGAAACTAGATCT
rJMSF041N21+          GCAAGATTACAAGCTGCAAGTTTCCAGACTTTACTTGACCCTCCAGCAGAAACTAGATCT
                      ____________________________________________________________
consensus             GCAAGATTACAAGCTGCAAGTTTCCAGACTTTACTTGACCCTCCAGCAGAAACTAGATCT
 
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rJMSF019K23+          CTTTTAGATGAGGACGCTGCTGGCTTTCCGGTTTGGCGTAACATGTGTAGTTCCCCTTAG
rJMSF041N21+          CTTTTAGATGAGGACGCTGCTGGCTTTCCGGTTTGGCGTAACATGTGTAGTTCCCCTTAG
                      ____________________________________________________________
consensus             CTTTTAGATGAGGACGCTGCTGGCTTTCCGGTTTGGCGTAACATGTGTAGTTCCCCTTAG
 
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rJMSF019K23+          TTTTTGTACTGCTCCCTTTGTGGGTATCCCCCT                           
rJMSF041N21+          TTTTTGTACTGCTCCCTTTGTGGGTATCCCCCTTCCTCCTTATATATANTATAACCGTGA
                      ____________________________________________________________
consensus             TTTTTGTACTGCTCCCTTTGTGGGTATCCCCCTTCCTCCTTATATATANTATAACCGTGA