Contig 005784:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN007K10Sequence640005784 (2)ref|XP_009767927.1|202PREDICTED: uncharacterized protein LOC104218997 [Nicotiana sylvestris]
JMSF041G11Sequence535005784 (2)ref|XP_004246247.1|235PREDICTED: uncharacterized protein LOC101247846 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFN007K10+                   CTTTAATCAACCAAACCCAACAAAAGGAGGAAGAAAACTGAGTACCACAGCA
                      ____________________________________________________________
consensus                     CTTTAATCAACCAAACCCAACAAAAGGAGGAAGAAAACTGAGTACCACAGCA
 
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JMFN007K10+           GGAACATTACAAAAGAAAGCTTAAAAAATGACCCCAAAAAAAAATAAATAAAAATAAAAA
                      ____________________________________________________________
consensus             GGAACATTACAAAAGAAAGCTTAAAAAATGACCCCAAAAAAAAATAAATAAAAATAAAAA
 
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JMFN007K10+           CCAAAGAATATTCAAAGCAAATTTCCAACTGAGGTACAGAGCAGCAGCTTATTTTGCTAT
                      ____________________________________________________________
consensus             CCAAAGAATATTCAAAGCAAATTTCCAACTGAGGTACAGAGCAGCAGCTTATTTTGCTAT
 
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JMFN007K10+           CTAATTATATAATCTGAGGGTCTGAGCTTGAGGGAAAATAGTCAGAAACATGATTAGTTA
                      ____________________________________________________________
consensus             CTAATTATATAATCTGAGGGTCTGAGCTTGAGGGAAAATAGTCAGAAACATGATTAGTTA
 
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JMFN007K10+           GCACCGCGACAACAACCGGGATCTCAAGCCTGCTTTGGCAAGGGTGGCTGCGGAAGAAGT
                      ____________________________________________________________
consensus             GCACCGCGACAACAACCGGGATCTCAAGCCTGCTTTGGCAAGGGTGGCTGCGGAAGAAGT
 
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JMFN007K10+           GTGCTGGCAAGCTCGTCGTTCAGCTTCACGGGGAGGGGTGGCATCTGCTTCATTATCTCC
                      ____________________________________________________________
consensus             GTGCTGGCAAGCTCGTCGTTCAGCTTCACGGGGAGGGGTGGCATCTGCTTCATTATCTCC
 
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JMFN007K10+           GGCATATCGTTCATATCATTTAAGATCGAGAGGATATTATTTCGAGCCTGGCAGAGAAGA
rJMSF041G11+               ATCGTTCATATCATTTAAGATCGAGAGGATATTATNTCGAGCCTGGCAGAGAAGA
                      ____________________________________________________________
consensus             GGCATATCGTTCATATCATTTAAGATCGAGAGGATATTATTTCGAGCCTGGCAGAGAAGA
 
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JMFN007K10+           CCGATGTTCTCATGTATCTTGAAAGCAGCAAAGTTTGTAGAAATCTGATCCAAGGCCTGG
rJMSF041G11+          CAGATGTTNTCATGTATCTNGAAAGCAGCAAAGTTNGTAGAAATCTGATCCAAGGCCTGG
                      ____________________________________________________________
consensus             CCGATGTTCTCATGTATCTTGAAAGCAGCAAAGTTTGTAGAAATCTGATCCAAGGCCTGG
 
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JMFN007K10+           GCAGTTTGTTCAAGGAGCTGTCCAGCGGGGCCACCAATTGCTTTGTAGGATATACCATCA
rJMSF041G11+          GCAGTTTGTTCAAGGAGCTGTCCAGCGGGGCCACCAATTGCTTNGTAGGATATACCATCA
                      ____________________________________________________________
consensus             GCAGTTTGTTCAAGGAGCTGTCCAGCGGGGCCACCAATTGCTTTGTAGGATATACCATCA
 
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JMFN007K10+           TCATTGTCCATGGATGTAGTAGATTGAGCATAGAAAGGGCCATTTGTAAGATTTGCAACA
rJMSF041G11+          TCATNGTCCATGGATGTAGTAGATTGAGCATAGAAAGGGCCATNTGTAAGATNTGCAACA
                      ____________________________________________________________
consensus             TCATTGTCCATGGATGTAGTAGATTGAGCATAGAAAGGGCCATTTGTAAGATTTGCAACA
 
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JMFN007K10+           TGTGAAGATTTTGGCATAGACTCGGTTATCTTTTCCTTTTTGTCT               
rJMSF041G11+          TGTGAAGATTTTGGCATAGANTCGGTTATCTTNTCCTTTTNGTCTNTACTTTTCCNTGAT
                      ____________________________________________________________
consensus             TGTGAAGATTTTGGCATAGACTCGGTTATCTTTTCCTTTTTGTCTNTACTTTTCCNTGAT
 
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rJMSF041G11+          GAATTATGATCTTCTNTTCTCCTCNTGCTGTTTTCCTTTTTGGTCATCCATCTACATCTC
                      ____________________________________________________________
consensus             GAATTATGATCTTCTNTTCTCCTCNTGCTGTTTTCCTTTTTGGTCATCCATCTACATCTC
 
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rJMSF041G11+          AGTGGTACATCTCGAACAGTNTTATCGTTTAACTGCATAGCAATTTTNGCATAACGGACT
                      ____________________________________________________________
consensus             AGTGGTACATCTCGAACAGTNTTATCGTTTAACTGCATAGCAATTTTNGCATAACGGACT
 
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rJMSF041G11+          ATGTTGTTTTCNTTAGCATATGNNGNGAGCAATTCNTNCAATATAGACTGTTCCTCCGGA
                      ____________________________________________________________
consensus             ATGTTGTTTTCNTTAGCATATGNNGNGAGCAATTCNTNCAATATAGACTGTTCCTCCGGA
 
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rJMSF041G11+          GTCCATTCCACGGAGATNCCAGGGTATGTGGCGGAGCGCGGCTNTGCGTAGCCCCCAACA
                      ____________________________________________________________
consensus             GTCCATTCCACGGAGATNCCAGGGTATGTGGCGGAGCGCGGCTNTGCGTAGCCCCCAACA