Contig 005777:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018B08Sequence440005777 (8)ref|XP_009791025.1|3e-45PREDICTED: uncharacterized protein LOC104238384 isoform X2 [Nicotiana sylvestri789005777 (8)ref|XP_009791025.1|2e-134PREDICTED: uncharacterized protein LOC104238384 isoform X2 [Nicotiana sylvestri
JMSF029H09Sequence674005777 (8)ref|XP_009791025.1|1e-92PREDICTED: uncharacterized protein LOC104238384 isoform X2 [Nicotiana sylvestri729005777 (8)ref|XP_006346985.1|379PREDICTED: uncharacterized protein LOC102599146 [Solanum tuberosum]
JMSF036K06Sequence675005777 (8)ref|XP_009791025.1|2e-86PREDICTED: uncharacterized protein LOC104238384 isoform X2 [Nicotiana sylvestri722005777 (8)ref|XP_006346985.1|376PREDICTED: uncharacterized protein LOC102599146 [Solanum tuberosum]
JMSF039N10Sequence666005777 (8)ref|XP_009791025.1|1e-68PREDICTED: uncharacterized protein LOC104238384 isoform X2 [Nicotiana sylvestri889005777 (8)ref|XP_009791025.1|8e-105PREDICTED: uncharacterized protein LOC104238384 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


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JMSF018B08-                                              GTCGAAGGAAGAGGAGAAGAACATA
JMSF036K06-             GCTCCATTGTTGAAGTTGAAATGCTCGTTGCGAGTCGAAGGAAGAGGAGAAGAACATA
JMSF039N10-                                              GTCGAAGGAAGAGGAGAAGAACATA
JMSF029H09-                                              GTCGAAGGAAGAGGAGAAGAACATA
                      ____________________________________________________________
consensus               GCTCCATTGTTGAAGTTGAAATGCTCGTTGCGAGTCGAAGGAAGAGGAGAAGAACATA
 
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JMSF018B08-           GCATAACGAGTCAGAGCCAGCTTCATAGTGTCTGTGGTTTCACCGCTTTGTAACCTGCAA
JMSF036K06-           GCATAACGAGTCAGAGCCAGCTTCATAGTGTCTGTGGTTTCACCGCTTTGTAACCTGCAA
JMSF039N10-           GCATAACGAGTCAGAGCCAGCTTCATAGTGTCTGTGGTTTCACCGCTTTGTAACCTGCAA
JMSF029H09-           GCATAACGAGTCAGAGCCAGCTTCATAGTGTCTGTGGTTTCACCGCTTTGTAACCTGCAA
                      ____________________________________________________________
consensus             GCATAACGAGTCAGAGCCAGCTTCATAGTGTCTGTGGTTTCACCGCTTTGTAACCTGCAA
 
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JMSF018B08-           TGAATATGTCTGGGTTAACTGCTAGCCCATTGAGATA-CAACCTTCATCTACCTGTGCGA
JMSF036K06-           TGAATATGTCTGGGTTAACTGCTAGCCCATTGAGATA-CAACCTTCATCTACCTGTGCGA
JMSF039N10-           TGAATATGTCTGGGTTAACTGCTAGCCCATTGAGATA-CAACCTTCATCTACCTGTGCGA
JMSF029H09-           TGAATATGTCTGGGTTAACTGCTAGCCCATTGAGATA-CAACCTTCATCTACCTGTGCGA
rJMSF039N10+                   CTGGGTTAACTGCTAGCCCATTGAGATACCAACCTTCATCTACCTGTGCGA
                      ____________________________________________________________
consensus             TGAATATGTCTGGGTTAACTGCTAGCCCATTGAGATA-CAACCTTCATCTACCTGTGCGA
 
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JMSF018B08-           TGTCTTGGTTTGCCTAGCAAAAGGGTCCTGGTATTTCCTAATGTATCGAGAACTAGATGC
JMSF036K06-           TGTCTTGGTTTGCCTAGCAAAAGGGTCCTGGTATTTCCTAATGTATCGAGAACTAGATGC
JMSF039N10-           TGTCTTGGTTTGCCTAGCAAAAGGGTCCTGGTATTTCCTAATGTATCGAGAACTAGATGC
JMSF029H09-           TGTCTTGGTTTGCCTAGCAAAAGGGTCCTGGTATTTCCTAATGTATCGAGAACTAGATGC
rJMSF018B08+                                                   TGTATCGAGAACTAGATGC
rJMSF039N10+          TGTCTTGGTTTGCCTAGCAAAAGGGTCCTGGTATTTCCTAATGTATCGAGAACTAGATGC
                      ____________________________________________________________
consensus             TGTCTTGGTTTGCCTAGCAAAAGGGTCCTGGTATTTCCTAATGTATCGAGAACTAGATGC
 
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JMSF018B08-           TGGGCTGACGTTACAAGGAAATGTAACATACAACGAAGTCCTCTAATCAAGTGTTCAATG
JMSF036K06-           TGGGCTGACGTTACAAGGAAATGTAACATACAACGAAGTCCTCTAATCAAGTGTTCAATG
JMSF039N10-           TGGGCTGACGTTACAAGGAAATGTAACATACAACGAAGTCCTCTAATCAAGTGTTCAATG
JMSF029H09-           TGGGCTGACGTTACAAGGAAATGTAACATACAACGAAGTCCTCTAATCAAGTGTTCAATG
rJMSF036K06+                                                          AAGTGTTCAATG
rJMSF029H09+                                                  CTCTAATCAAGTGTTCAATG
rJMSF018B08+          TGGGCTGACGTTACAAGGAAATGTAACATACAACGAAGTCCTCTAATCAAGTGTTCAATG
rJMSF039N10+          TGGGCTGACGTTACAAGGAAATGTAACATACAACGAAGTCCTCTAATCAAGTGTTCAATG
                      ____________________________________________________________
consensus             TGGGCTGACGTTACAAGGAAATGTAACATACAACGAAGTCCTCTAATCAAGTGTTCAATG
 
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JMSF018B08-           TCTGCTTCCTATGGTGATTCCATGGGCGATGCTGCTGCTGTTTTTCCTAGGATCAACGTA
JMSF036K06-           TCTGCTTCCTATGGTGATTCCATGGGCGATGCTGCTGCTGTTTTTCCTAGGATCAACGTA
JMSF039N10-           TCTGCTTCCTATGGTGATTCCATGGGCGATGCTGCTGCTGTTTTTCCTAGGATCAACGTA
JMSF029H09-           TCTGCTTCCTATGGTGATTCCATGGGCGATGCTGCTGCTGTTTTTCCTAGGATCAACGTA
rJMSF036K06+          TCTGCTTCCTATGGTGATTCCATGGGCGATGCTGCTGCTGTTTTTCCTAGGATCAACGTA
rJMSF029H09+          TCTGCTTCCTATGGTGATTCCATGGGCGATGCTGCTGCTGTTTTTCCTAGGATCAACGTA
rJMSF018B08+          TCTGCTTCCTATGGTGATTCCATGGGCGATGCTGCTGCTGTTTTTCCTAGGATCAACGTA
rJMSF039N10+          TCTGCTTCCTATGGTGATTCCATGGGCGATGCTGCTGCTGTTTTTCCTAGGATCAACGTA
                      ____________________________________________________________
consensus             TCTGCTTCCTATGGTGATTCCATGGGCGATGCTGCTGCTGTTTTTCCTAGGATCAACGTA
 
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JMSF018B08-           ATGGATCCATACAAACGACTTGGAATCAGCAGGGAGGCTTCTGAAGAAGAAATCCAATCA
JMSF036K06-           ATGGATCCATACAAACGACTTGGAATCAGCAGGGAGGCTTCTGAAGAAGAAATCCAATCA
JMSF039N10-           ATGGATCCATACAAACGACTTGGAATCAGCAGGGAGGCTTCTGAAGAAGAAATCCAATCA
JMSF029H09-           ATGGATCCATACAAACGACTTGGAATCAGCAGGGAGGCTTCTGAAGAAGAAATCCAATCA
rJMSF036K06+          ATGGATCCATACAAACGACTTGGAATCAGCAGGGAGGCTTCTGAAGAAGAAATCCAATCA
rJMSF029H09+          ATGGATCCATACAAACGACTTGGAATCAGCAGGGAGGCTTCTGAAGAAGAAATCCAATCA
rJMSF018B08+          ATGGATCCATACAAACGACTTGGAATCAGCAGGGAGGCTTCTGAAGAAGAAATCCAATCA
rJMSF039N10+          ATGGATCCATACAAACGACTTGGAATCAGCAGGGAGGCTTCTGAAGAAGAAATCCAATCA
                      ____________________________________________________________
consensus             ATGGATCCATACAAACGACTTGGAATCAGCAGGGAGGCTTCTGAAGAAGAAATCCAATCA
 
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JMSF018B08-           GCTCGAAACTTCCTAATACAAAGATATGCTGGTCATAAGCCNAGTGTA            
JMSF036K06-           GCTCGAAACTTCCTAATACAAAGATATGCTGGTCATAAGCCAAGTGTAGATGCGATTGAA
JMSF039N10-           GCTCGAAACTTCCTAATAC-AAGATATGCTGGTCATAAGCCAAGTGTAGATGCGATTGAA
JMSF029H09-           GCTCGAAACTTCCTAATACAAAGATATGCTGGTCATAAGCCAAGTGTAGATGCGATTGAA
rJMSF036K06+          GCTCGAAACTTCCTAATACAAAGATATGCTGGTCATAAGCCAAGTGTAGATGCGATTGAA
rJMSF029H09+          GCTCGAAACTTCCTAATACAAAGATATGCTGGTCATAAGCCAAGTGTAGATGCGATTGAA
rJMSF018B08+          GCTCGAAACTTCCTAATACAAAGATATGCTGGTCATAAGCCAAGTGTAGATGCGATTGAA
rJMSF039N10+          GCTCGAAACTTCCTAATAC-AAGATATGCTGGTCATAAGCCAAGTGTAGATGCGATTGAA
                      ____________________________________________________________
consensus             GCTCGAAACTTCCTAATACAAAGATATGCTGGTCATAAGCCAAGTGTAGATGCGATTGAA
 
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JMSF036K06-           TCAGCCCATGATAAGATAATTATGCAAAAGTTTCATGAAAGGAAGAACCCAAAAATAAAT
JMSF039N10-           TCAGCCCATGATAAGATAATTATGCAAAAGTTTCATGAAAGGAAGAACCCAAAAATAAAT
JMSF029H09-           TCAGCCCATGATAAGATAATTATGCAAAAGTTTCATGAAAGGAAGAACCCAAAAATAAAT
rJMSF036K06+          TCAGCCCATGATAAGATAATTATGCAAAAGTTTCATGAAAGGAAGAACCCAAAAATAAAT
rJMSF029H09+          TCAGCCCATGATAAGATAATTATGCAAAAGTTTCATGAAAGGAAGAACCCAAAAATAAAT
rJMSF018B08+          TCAGCCCATGATAAGATAATTATGCAAAAGTTTCATGAAAGGAAGAACCCAAAAATAAAT
rJMSF039N10+          TCAGCCCATGATAAGATAATTATGCAAAAGTTTCATGAAAGGAAGAACCCAAAAATAAAT
                      ____________________________________________________________
consensus             TCAGCCCATGATAAGATAATTATGCAAAAGTTTCATGAAAGGAAGAACCCAAAAATAAAT
 
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JMSF036K06-           ATTAAGAAAAAGGTCAGGGAAGTAACTCAATCTAAGGCTGTGCAGTTGGTTGCAAGCAGG
JMSF039N10-           ATTAAGAAAAAGGTCAGGGAAGTAACTCAATCTAAGGCTGTGCAGTTGGTTGCAAGCAGG
JMSF029H09-           ATTAAGAAAAAGGTCAGGGAAGTAACTCAATCTAAGGCTGTGCAGTTGGTTGCAAGCAGG
rJMSF036K06+          ATTAAGAAAAAGGTCAGGGAAGTAACTCAATCTAAGGCTGTGCAGTTGGTTGCAAGCAGG
rJMSF029H09+          ATTAAGAAAAAGGTCAGGGAAGTAACTCAATCTAAGGCTGTGCAGTTGGTTGCAAGCAGG
rJMSF018B08+          ATTAAGAAAAAGGTCAGGGAAGTAACTCAATCTAAGGCTGTGCAGTTGGTTGCAAGCAGG
rJMSF039N10+          ATTAAGAAAAAGGTCAGGGAAGTAACTCAATCTAAGGCTGTGCAGTTGGTTGCAAGCAGG
                      ____________________________________________________________
consensus             ATTAAGAAAAAGGTCAGGGAAGTAACTCAATCTAAGGCTGTGCAGTTGGTTGCAAGCAGG
 
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JMSF036K06-           TTCCGTGAGCCGGCAACATCTTTCTTGATGAAAACTTCCATTGCTTTCATTGTTCTTGGA
JMSF039N10-           TTCCGTGAGCCGGCAACATCTTTCTTGATGAAAACTTCCATTGCTTTCATTGTTCTTGGA
JMSF029H09-           TTCCGTGAGCCGGCAACATCTTTCTTGATGAAAACTTCCATTGCTTTCATTGTTCTTGGA
rJMSF036K06+          TTCCGTGAGCCGGCAACATCTTTCTTGATGAAAACTTCCATTGCTTTCATTGTTCTTGGA
rJMSF029H09+          TTCCGTGAGCCGGCAACATCTTTCTTGATGAAAACTTCCATTGCTTTCATTGTTCTTGGA
rJMSF018B08+          TTCCGTGAGCCGGCAACATCTTTCTTGATGAAAACTTCCATTGCTTTCATTGTTCTTGGA
rJMSF039N10+          TTCCGTGAGCCGGCAACATCTTTCTTGATGAAAACTTCCATTGCTTTCATTGTTCTTGGA
                      ____________________________________________________________
consensus             TTCCGTGAGCCGGCAACATCTTTCTTGATGAAAACTTCCATTGCTTTCATTGTTCTTGGA
 
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JMSF036K06-           GCTATTACAGTTCTCTTT                                          
JMSF039N10-           GCTATTACAGTTCTCTTTCCAACTGATGAAGGTCCAACTCTT                  
JMSF029H09-           GCTATTACAGTTCTCTTTCCAACTGATGAAGGTCCAACTCTT                  
rJMSF036K06+          GCTATTACAGTTCTCTTTCCAACTGATGAAGGTCCAACTCTTCAAGTAGCCATTTCCCTG
rJMSF029H09+          GCTATTACAGTTCTCTTTCCAACTGATGAAGGTCCAACTCTTCAAGTAGCCATTTCCCTG
rJMSF018B08+          GCTATTACAGTTCTCTTTCCAACTGATGAAGGTCCAACTCTTCAAGTAGCCATTTCCCTG
rJMSF039N10+          GCTATTACAGTTCTCTTTCCAACTGATGAAGGTCCAACTCTTCAAGTAGCCATTTCCCTG
                      ____________________________________________________________
consensus             GCTATTACAGTTCTCTTTCCAACTGATGAAGGTCCAACTCTTCAAGTAGCCATTTCCCTG
 
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rJMSF036K06+          ATCACTACCGTGTATTTCATTTATGACCGGCTAAAGACCAAACTTCGCGCTTTTCTCTAT
rJMSF029H09+          ATCACTACCGTGTATTTCATTTATGACCGGCTAAAGACCAAACTTCGCGCTTTTCTCTAT
rJMSF018B08+          ATCACTACCGTGTATTTCATTTATGACCGGCTAAAGACCAAACTTCGCGCTTTTCTCTAT
rJMSF039N10+          ATCACTACCGTGTATTTCATTTATGACCGGCTAAAGACCAAACTTCGCGCTTTTCTCTAT
                      ____________________________________________________________
consensus             ATCACTACCGTGTATTTCATTTATGACCGGCTAAAGACCAAACTTCGCGCTTTTCTCTAT
 
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rJMSF036K06+          GGGGTTGGCGCTTTTATTTTCTCGTGGCTGTTAGGAACGTTCTTGATGGTATCGGTAATC
rJMSF029H09+          GGGGTTGGCGCTTTTATTTTCTCGTGGCTGTTAGGAACGTTCTTGATGGTATCGGTAATC
rJMSF018B08+          GGGGTTGGCGCTTTTATTTTCTCGTGGCTGTTAGGAACGTTCTTGATGGTATCGGTAATC
rJMSF039N10+          GGGGTTGGCGCTTTTATTTTCTCGTGGCTGTTAGGAACGTTCTTGATGGTATCGGTAATC
                      ____________________________________________________________
consensus             GGGGTTGGCGCTTTTATTTTCTCGTGGCTGTTAGGAACGTTCTTGATGGTATCGGTAATC
 
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rJMSF036K06+          CCACCTATACTTAGAGGCCCCAGGAGTTTGGAGGTTACAACTTCACTGATAACCTATGTG
rJMSF029H09+          CCACCTATACTTAGAGGCCCCAGGAGTTTGGAGGTTACAACTTCACTGATAACCTATGTG
rJMSF018B08+          CCACCTATACTTAGAGGCCCCAGGAGTTTGGAGGTTACAACTTCACTGATAACCTATGTG
rJMSF039N10+          CCACCTATACTTAGAGGCCCCAGGAGTTTGGAGGTTACAACTTCACTGATAACCTATGTG
                      ____________________________________________________________
consensus             CCACCTATACTTAGAGGCCCCAGGAGTTTGGAGGTTACAACTTCACTGATAACCTATGTG
 
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rJMSF036K06+          CTGTTGTGGGTTTCTTCCACTTATCTCATATAGGGTTCTGTTACTTTCTTCCAATTTTGT
rJMSF029H09+          CTGTTGTGGGTTTCTTCCACTTATCTCATATAGGGTTCTGTTACTTTCTTCCAATTTTGT
rJMSF018B08+          CTGTTGTGGGTTTCTTCCACTTATCTCATATAGGGTTCTGTTACTTTCTTCCAATTTTGT
rJMSF039N10+          CTGTTGTGGGTTTCTTCCACTTATCTCATATAGGGTTCTGTTACTTTCTTCCAATTTTGT
                      ____________________________________________________________
consensus             CTGTTGTGGGTTTCTTCCACTTATCTCATATAGGGTTCTGTTACTTTCTTCCAATTTTGT
 
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rJMSF036K06+          AAGTTGATAGAGGTAAGACCCGGGGGTACTGCCTCTGACATTGAAACAGA          
rJMSF029H09+          AAGTTGATAGAGGTAAGA-CCGGGGGTACTGCCTCTGACATTGAAACAGA          
rJMSF018B08+          AAGTTGATAGAGGTAAGA-CCGGGGGTACTGCCTCTGACATTGAAACAGA          
rJMSF039N10+          AAGTTGATAGAGGTAAGA-CCGGGGGTACTGCCTCTGACATTGAAACAGAATGAAGTTGC
                      ____________________________________________________________
consensus             AAGTTGATAGAGGTAAGA-CCGGGGGTACTGCCTCTGACATTGAAACAGAATGAAGTTGC