Contig 005775:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF039D21+                                                                     C
                      ____________________________________________________________
consensus                                                                        C
 
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rJMSF039D21+          ACATAGCCGCTGATTACCTTCTCGATGAAACTTAAAAACCTGTGGGGTAAAAATTCTGGA
                      ____________________________________________________________
consensus             ACATAGCCGCTGATTACCTTCTCGATGAAACTTAAAAACCTGTGGGGTAAAAATTCTGGA
 
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rJMSF039D21+          ATTGATGTATGATCGTGTTTTGCAATATCCTGACCCGTGTCAGAAACTTGTATTTCACTT
                      ____________________________________________________________
consensus             ATTGATGTATGATCGTGTTTTGCAATATCCTGACCCGTGTCAGAAACTTGTATTTCACTT
 
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rJMSF039D21+          TCCTCTTTGTTCTTAGAGCTGTCACAAAAGCAAAAAATTACTTGGAACAGGCTGAATATG
                      ____________________________________________________________
consensus             TCCTCTTTGTTCTTAGAGCTGTCACAAAAGCAAAAAATTACTTGGAACAGGCTGAATATG
 
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rJMSF039D21+          ACACTGGAAATGTGGAGGCGGATCTGAAAGCGCAGTCCCTTATGCGCCAACTACTTTACA
                      ____________________________________________________________
consensus             ACACTGGAAATGTGGAGGCGGATCTGAAAGCGCAGTCCCTTATGCGCCAACTACTTTACA
 
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rJMSF039D21+          ACCCGAAACTTCGAGCTGCATGTCCACTTCCATTTGATGAAGCTAAACTGTGGAAAGGCC
                      ____________________________________________________________
consensus             ACCCGAAACTTCGAGCTGCATGTCCACTTCCATTTGATGAAGCTAAACTGTGGAAAGGCC
 
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rJMSF039D21+          AAAGTGGACCTGAGCTGAAGCAGCAGATTCAGAAACAATTCAGGAATATCAGTTCTTTAA
                      ____________________________________________________________
consensus             AAAGTGGACCTGAGCTGAAGCAGCAGATTCAGAAACAATTCAGGAATATCAGTTCTTTAA
 
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rJMSF039D21+          TGGATTGTGTAGGATGTGAAAAATGCCGTCTTTGGGGAAAGCTTCAAGTTCTCGGTCTTG
                      ____________________________________________________________
consensus             TGGATTGTGTAGGATGTGAAAAATGCCGTCTTTGGGGAAAGCTTCAAGTTCTCGGTCTTG
 
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rJMSF039D21+          GAACTGCCTTAAAGATTCTTTTCTCTGTGGATGGTCAGATGAACTCAGAGCCACCTTCAT
                      ____________________________________________________________
consensus             GAACTGCCTTAAAGATTCTTTTCTCTGTGGATGGTCAGATGAACTCAGAGCCACCTTCAT
 
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rJMFF002P18+                                                                    AG
rJMSF039D21+          CGCTCTAATGAACCTGCTGAATCGCCTATCAGAATCAATCAATGTTGTGCACACGACGAG
                      ____________________________________________________________
consensus             CGCTCTAATGAACCTGCTGAATCGCCTATCAGAATCAATCAATGTTGTGCACACGACGAG
 
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rJMFF002P18+          CCCATTGGTTGAGAAGNCAAANTGGTGGAGGCTTGTTTCAGATCACCCAACCACAATTAT
rJMFF036L21+                                                 AGATCACCCATCCACAATTAT
rJMSF039D21+          CCCATTGGTTGAGAAGACAAAGTGGTGGAGGCTTGTTTCAGATCACCCAACCACAATTAT
                      ____________________________________________________________
consensus             CCCATTGGTTGAGAAGACAAAGTGGTGGAGGCTTGTTTCAGATCACCCAACCACAATTAT
 
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rJMFF002P18+          TAGTTCATGGAGAAGAATATGGGAGAGAATAGTAGAAAAGGTGTACGTATTAGCAGANCC
rJMFF036L21+          TAGTTCATGGAGAAGAATATGGGAGAGAATAGTAGAAAAGGNGNANGTANTAGCAGAACC
rJMSF039D21+          TAGTTCATGGAGAAGAATATGGGAGAGAATAGTAGAAAAGGTGTACGTATTAGCAGAACC
                      ____________________________________________________________
consensus             TAGTTCATGGAGAAGAATATGGGAGAGAATAGTAGAAAAGGTGTACGTATTAGCAGAACC
 
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rJMFF002P18+          GTTCCGTTGAAACGTTGCCATTAAGAACTGTCTATATAAAGAGATCTCTCAGAGTCATAT
rJMFF036L21+          GTTCCGTTGAAACGTTGCCATTAAGAACTGTCTATATAAAGAGATCTCTCAGAGTCATAT
rJMSF039D21+          GTTCCGTTGAAACGTTGCCATTAAGAACTGTCTATATAAAGAGATCTCTCAGAGTCATAT
                      ____________________________________________________________
consensus             GTTCCGTTGAAACGTTGCCATTAAGAACTGTCTATATAAAGAGATCTCTCAGAGTCATAT
 
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rJMFF002P18+          AGAAACATCAGGAAAAGGCTCCATCTTTGTTGATGAGATGATGACTGGAAACTTGTTGTC
rJMFF036L21+          AGAAACATCAGGAAAAGGCTCCATCTTTGTTGATGAGATGATGACTGGAAACTTGTTGTC
rJMSF039D21+          AGAAACATCAGGAAAAGGCTCCATCTTTGTTGATGAGATGATGACTGGAAACTTGTTGTC
                      ____________________________________________________________
consensus             AGAAACATCAGGAAAAGGCTCCATCTTTGTTGATGAGATGATGACTGGAAACTTGTTGTC
 
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rJMFF002P18+          AGAATGTAAATTTTGCCACATTAATCCTCCTCAAAATGTCTGTAACATTAATTGTACGGT
rJMFF036L21+          AGAATGTAAATTTTGCCACATTAATCCTCCTCAAAATGTCTGTAACATTAATTGTACGGT
rJMSF039D21+          AGAATGTAAATTTTGCCACATTAATCCTCCTCAAAATGTCTGTAACATTAATTGTACGGT
                      ____________________________________________________________
consensus             AGAATGTAAATTTTGCCACATTAATCCTCCTCAAAATGTCTGTAACATTAATTGTACGGT
 
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rJMFF002P18+          TTATCATGTCTCTGATTACAA                                       
rJMFF036L21+          TTATCATGTCTCTGATTACAA                                       
rJMSF039D21+          TTATCATGTCTCTGATTACAANCTGGCATGAAATGAGAAAATTTTGCTTCCAATATTGTT
                      ____________________________________________________________
consensus             TTATCATGTCTCTGATTACAANCTGGCATGAAATGAGAAAATTTTGCTTCCAATATTGTT