Contig 005772:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009E23Sequence342005772 (7)615005760 (3)ref|XP_006359541.1|7e-26PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Solanum tuberosum]
JMSF037G02Sequence648005772 (7)ref|XP_009791877.1|8e-29PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Nicotiana sylvestris]767005760 (3)ref|XP_004242737.1|8e-37PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Solanum lycopersicum]
JMSF038N02Sequence647005772 (7)ref|XP_009791877.1|8e-29PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Nicotiana sylvestris]911005760 (3)ref|XP_008457196.1|7e-57PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis melo]
JMSF038N18Sequence663005772 (7)ref|XP_006359541.1|1e-68PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Solanum tuberosum]818005772 (7)ref|XP_009791877.1|1e-36PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Nicotiana sylvestris]
JMSF043B20Sequence524005772 (7)ref|XP_009608573.1|6e-67PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Nicotiana tomentosifo
JMSF044B20Sequence524005772 (7)ref|XP_009608573.1|6e-67PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Nicotiana tomentosifo

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF044B20- GGCAGATCACTGGATCTATTGTTCATAGCCACTTCATAAACTCCACAATGAACA
JMSF043B20- GGCAGATCACTGGATCTATTGTTCATAGCCACTTCATAAACTCCACAATGAACA
JMSF038N18- GTTCATAGCCACTTCATAAACTCCACAATGAACA
                      ____________________________________________________________
consensus GGCAGATCACTGGATCTATTGTTCATAGCCACTTCATAAACTCCACAATGAACA
 
. : . : . : . : . : . :
JMSF044B20- CAAAAGACAGCCCAAATCAATGCAGACCTGTACAAGAACTTTGCAGGGCTATATGGAGCT
JMSF043B20- CAAAAGACAGCCCAAATCAATGCAGACCTGTACAAGAACTTTGCAGGGCTATATGGAGCT
JMSF038N18- CAAAAGACAGCCCAAATCAATGCAGACCTGTACAAGAACTTTGCAGGGCTATATGGAGCT
                      ____________________________________________________________
consensus CAAAAGACAGCCCAAATCAATGCAGACCTGTACAAGAACTTTGCAGGGCTATATGGAGCT
 
. : . : . : . : . : . :
JMSF044B20- TGCTCCCCAGAAAAAACAGCAGAGAACATCGCATCCAAATCACAAGCTAAACACAGTTTC
JMSF043B20- TGCTCCCCAGAAAAAACAGCAGAGAACATCGCATCCAAATCACAAGCTAAACACAGTTTC
JMSF038N18- TGCTCCCCAGAAAAAACAGCAGAGAACATCGCATCCAAATCACAAGCTAAACACAGTTTC
                      ____________________________________________________________
consensus TGCTCCCCAGAAAAAACAGCAGAGAACATCGCATCCAAATCACAAGCTAAACACAGTTTC
 
. : . : . : . : . : . :
JMSF044B20- ACATTTTTATTACTATCTTCTTTCGATCTTGTGGTGATACTCCTATTTTTCTGCTGGCAA
JMSF043B20- ACATTTTTATTACTATCTTCTTTCGATCTTGTGGTGATACTCCTATTTTTCTGCTGGCAA
JMSF038N18- ACATTTTTATTACTATCTTCTTTCGATCTTGTGGTGATACTCCTATTTTTCTGCTGGC--
                      ____________________________________________________________
consensus ACATTTTTATTACTATCTTCTTTCGATCTTGTGGTGATACTCCTATTTTTCTGCTGGCAA
 
. : . : . : . : . : . :
JMSF044B20- AAATATCTGTTATGCTTATCACTCAGAAAATAGTTCCTCAGTGGTGGTGTGTGCATCAAT
JMSF043B20- AAATATCTGTTATGCTTATCACTCAGAAAATAGTTCCTCAGTGGTGGTGTGTGCATCAAT
JMSF038N18- AAATATCTGTTATGCTTATCACTCAGAAAATAGTTCCTCAGTGGTGGTGTGTGCATCAAT
                      ____________________________________________________________
consensus AAATATCTGTTATGCTTATCACTCAGAAAATAGTTCCTCAGTGGTGGTGTGTGCATCAAT
 
. : . : . : . : . : . :
JMSF044B20- GCTTGCAATACAGAGTTCATAAAGCACGTATTGCCTAGATTGTTCAGGCCTCTCAATCCC
JMSF043B20- GCTTGCAATACAGAGTTCATAAAGCACGTATTGCCTAGATTGTTCAGGCCTCTCAATCCC
JMSF038N18- GCTTGCAATACAGAGTTCATAAAGCACGTATTGCCTAGATTGTTCAGGCCTCTCAATCCC
                      ____________________________________________________________
consensus GCTTGCAATACAGAGTTCATAAAGCACGTATTGCCTAGATTGTTCAGGCCTCTCAATCCC
 
. : . : . : . : . : . :
JMSF044B20- CAGGGACGGTCTGGTGACTCGGATTCGTTTCCGTTTCCGGTTTGAGTCGATAACGGCATC
JMSF043B20- CAGGGACGGTCTGGTGACTCGGATTCGTTTCCGTTTCCGGTTTGAGTCGATAACGGCATC
JMSF038N18- CAGGGACGGTCTGGTGACTCGGATTCGTTTCCGTTTCCGGTTTGAGTCGATAACGGCATC
                      ____________________________________________________________
consensus CAGGGACGGTCTGGTGACTCGGATTCGTTTCCGTTTCCGGTTTGAGTCGATAACGGCATC
 
. : . : . : . : . : . :
JMSF044B20- GAGTTTTCTACAATCAGGACTTGCTCTTTCAGATCGGGCGACCAGGGTTTGTAATCAACG
JMSF043B20- GAGTTTTCTACAATCAGGACTTGCTCTTTCAGATCGGGCGACCAGGGTTTGTAATCAACG
JMSF038N18- GAGTTTTCTACAATCAGGACTTGCTCTTTCAGATCGGGCGACCAGGGTTTGTAATCAACG
                      ____________________________________________________________
consensus GAGTTTTCTACAATCAGGACTTGCTCTTTCAGATCGGGCGACCAGGGTTTGTAATCAACG
 
. : . : . : . : . : . :
JMSF044B20- CGCCGCCGCTTTCTTAAGCTCTCCTGTGGCGGCGGCGGCTGCTGGTGGGT
JMSF043B20- CGCCGCCGCTTTCTTAAGCTCTCCTGTGGCGGCGGCGGCTGCTGGTGGGT
JMSF038N18- CGCCGCCGCTTTCTTAAGCTCTCCTGTGGCGGCGGCGGCTGCTGGTGGGTGGAT-CCGAT
rJMSF038N18+ CCTGTGGCGGCGGCGGCTGCTGGTGGGTGGATCCCGAT
                      ____________________________________________________________
consensus CGCCGCCGCTTTCTTAAGCTCTCCTGTGGCGGCGGCGGCTGCTGGTGGGTGGATCCCGAT
 
. : . : . : . : . : . :
JMSF038N18- CATGGCGGCC-TCCGTTTGCGCTAGGACCACAGCCGCGTCAAAATCCAAATCATACACCT
JMSF037G02+ ATCATACACCT
JMSF038N02+ ATCATACACCT
rJMSF038N18+ CATGGCGGCCTTCCGTTTGCGCTAGGACCACAGCCGCGTCAAAATCCAAATCATACACCT
                      ____________________________________________________________
consensus CATGGCGGCCTTCCGTTTGCGCTAGGACCACAGCCGCGTCAAAATCCAAATCATACACCT
 
. : . : . : . : . : . :
JMSF038N18- GGTCCCGGCACGAGCAGCAGAAGAGCTCAGCGCGATCGACGTCAACAGAGACGTGGTGAG
JMSF037G02+ GGTCCCGGCACGAGCAGCAGAAGAGCTCAGCGCGATCGACGTCAACAGAGACGTGGTGAG
JMSF038N02+ GGTCCCGGCACGAGCAGCAGAAGAGCTCAGCGCGATCGACGTCAACAGAGACGTGGTGAG
rJMSF038N18+ GGTCCCGGCACGAGCAGCAGAAGAGCTCAGCGCGATCGACGTCAACAGAGACGTGGTGAG
                      ____________________________________________________________
consensus GGTCCCGGCACGAGCAGCAGAAGAGCTCAGCGCGATCGACGTCAACAGAGACGTGGTGAG
 
. : . : . : . : . : . :
JMSF038N18- ACGACTCCGCCGCGTGCGGCGGCGCGTGCA
JMSF037G02+ ACGACTCCGCCGCGTGCGGCGGCGCGTGCAGATGGCAGAACACAGCGGCGCAAGTGACGC
JMSF038N02+ ACGACTCCGCCGCGTGCGGCGGCGCGTGCAGATGGCAGAACACAGCGGCGCAAGTGACGC
rJMSF038N18+ ACGACTCCGCCGCGTGCGGCGGCGCGTGCAGATGGCAGAACACAGCGGCGCAAGTGACGC
                      ____________________________________________________________
consensus ACGACTCCGCCGCGTGCGGCGGCGCGTGCAGATGGCAGAACACAGCGGCGCAAGTGACGC
 
. : . : . : . : . : . :
JMSF037G02+ AAGCGTAGAGCCGCGGCCCAGCCAGCCCGCACGCTCCGCATCTGACGACCTCATTCGTCG
JMSF038N02+ AAGCGTAGAGCCGCGGCCCAGCCAGCCCGCACGCTCCGCATCTGACGACCTCATTCGTCG
rJMSF038N18+ AAGCGTAGAGCCGCGGCCCAGCCAGCCCGCACGCTCCGCATCTGACGACCTCATTCGTCG
                      ____________________________________________________________
consensus AAGCGTAGAGCCGCGGCCCAGCCAGCCCGCACGCTCCGCATCTGACGACCTCATTCGTCG
 
. : . : . : . : . : . :
JMSF037G02+ GCTCGCGGCGGATGGACGCCCTCCCCAGAGGCCTCACCCTCAGACACGCCCGTAGATTCT
JMSF009E23+ CAGACACGCCCGTAGATTCT
JMSF038N02+ GCTCGCGGCGGATGGACGCCCTCCCCAGAGGCCTCACCCTCAGACACGCCCGTAGATTCT
rJMSF038N18+ GCTCGCGGCGGATGGACGCCCTCCCCAGAGGCCTCACCCTCAGACACGCCCGTAGATTCT
                      ____________________________________________________________
consensus GCTCGCGGCGGATGGACGCCCTCCCCAGAGGCCTCACCCTCAGACACGCCCGTAGATTCT
 
. : . : . : . : . : . :
JMSF037G02+ GGAACGGGTTGGGCACAAATTTCGATCGGAGCATAGGCAAATGCGGACACTTAGCATTGC
JMSF009E23+ GGAACGGGTTGGGCACAAATTTCGATCGGAGCATAGGCAAATGCGGACACTTAGCATTGC
JMSF038N02+ GGAACGGGTTGGGCACAAATTTCGATCGGAGCATAGGCAAATGCGGACACTTAGCATTGC
rJMSF038N18+ GGAACGGGTTGGGCACAAATTTCGATCGGAGCATAGGCAAATGCGGACACTTAGCATTGC
                      ____________________________________________________________
consensus GGAACGGGTTGGGCACAAATTTCGATCGGAGCATAGGCAAATGCGGACACTTAGCATTGC
 
. : . : . : . : . : . :
JMSF037G02+ TAGGGCTGCAAACCGCCAACGACTTGATTCCCGTCTGATTGCCGAACCGATGGGCATCTG
JMSF009E23+ TAGGGCTGCAAACCGCCAACGACTTGATTCCCGTCTGATTGCCGAACCGATGGGCATCTG
JMSF038N02+ TAGGGCTGCAAACCGCCAACGACTTGATTCCCGTCTGATTGCCGAACCGATGGGCATCTG
rJMSF038N18+ TAGGGCTGCAAACCGCCAACGACTTGATTCCCGTCTGATTGCCGAACCGATGGGCATCTG
                      ____________________________________________________________
consensus TAGGGCTGCAAACCGCCAACGACTTGATTCCCGTCTGATTGCCGAACCGATGGGCATCTG
 
. : . : . : . : . : . :
JMSF037G02+ GGTCCGGATTCCCGGATTGGGTCCGATCCAGAATGGATCGCGGGATTTGATAGCTATGAT
JMSF009E23+ GGTCCGGATTCCCGGATTGGGTCCGATCCAGAATGGATCGCGGGATTTGATAGCTATGAT
JMSF038N02+ GGTCCGGATTCCCGGATTGGGTCCGATCCAGAATGGATCGCGGGATTTGATAGCTATGAT
rJMSF038N18+ GGTCCGGATTCCCGGATTGGGTCCGATCCAGAATGGATCGCGGGATTTGATAGCTATGAT
                      ____________________________________________________________
consensus GGTCCGGATTCCCGGATTGGGTCCGATCCAGAATGGATCGCGGGATTTGATAGCTATGAT
 
. : . : . : . : . : . :
JMSF037G02+ TTCCCGAGCTAGCTGATGATGACATTGATGTGGCTGGGAATGCGAAACCCAGATCAAGTT
JMSF009E23+ TTCCCGAGCTAGCTGATGATGACATTGATGTGGCTGGGAATGCGAAACCCAGATCAAGTT
JMSF038N02+ TTCCCGAGCTAGCTGATGATGACATTGATGTGGCTGGGAATGCGAAACCCAGATCAAGTT
rJMSF038N18+ TTCCCGAGCTAGCTGATGATGACATTGATGTGGCTGGGAATGCGAAACCCAGATCAAGTT
                      ____________________________________________________________
consensus TTCCCGAGCTAGCTGATGATGACATTGATGTGGCTGGGAATGCGAAACCCAGATCAAGTT
 
. : . : . : . : . : . :
JMSF037G02+ TATCCACCCAACTAGGTATCAGATTGACTACAAAAAGATCGAATCAAATGAATGGGAACA
JMSF009E23+ TATCCACCCAACTAGGTATCAGATTGACTACAAAAAGATCGAATCAAATGAATGGGAACA
JMSF038N02+ TATCCACCCAACTAGGTATCAGATTGACTACAAAAAGATCGAATCAAATGAATGGGAACA
rJMSF038N18+ TATCCACCCAACTAGGTATCAGATTGACTACAAAAAGATCGAATCAAATGAATGGGAACA
                      ____________________________________________________________
consensus TATCCACCCAACTAGGTATCAGATTGACTACAAAAAGATCGAATCAAATGAATGGGAACA
 
. : . : . : . : . : . :
JMSF037G02+ CGAATAGCAACTTGATGGATTGATGGATGAATGGATCAAAGAGAGATATTTATGGCAAAC
JMSF009E23+ CGAATAGCAACTTGATGGATT
JMSF038N02+ CGAATAGCAACTTGATGGATTGATGGATGAATGGATCAAAGAGAGATATTTATGGCAAAC
rJMSF038N18+ CGAATAGCAACTTGATGGATTGATGGATGAATGGATCAAAGAGAGATATTTATGGCAAAC
                      ____________________________________________________________
consensus CGAATAGCAACTTGATGGATTGATGGATGAATGGATCAAAGAGAGATATTTATGGCAAAC
 
. : . : . : . : . : . :
JMSF037G02+ GGCTGAGTGAAACACTGAAACTCTGAAAGAATTAC
JMSF038N02+ GGCTGAGTGAAACACTGAAACTCTGAAAGAATTAC
rJMSF038N18+ GGCTGAGTGAAACACTGAAACTCTGAAAGAATTACGATACAGAAACAGAGAAGCAAAACT
                      ____________________________________________________________
consensus GGCTGAGTGAAACACTGAAACTCTGAAAGAATTACGATACAGAAACAGAGAAGCAAAACT
 
. : . : . : . : . : . :
rJMSF038N18+ AGAAAGGGAAAGAGGGTACTGGATTTTGGATTTAATATTTATTGCTAATTACACATAATT
                      ____________________________________________________________
consensus AGAAAGGGAAAGAGGGTACTGGATTTTGGATTTAATATTTATTGCTAATTACACATAATT