Contig 005770:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031K21Sequence653007994 (2)655005770 (2)ref|XP_009590203.1|2e-13PREDICTED: GATA transcription factor 21-like, partial [Nicotiana tomentosiformi
JMSF038M24Sequence637007994 (2)ref|XP_011078200.1|6e-04PREDICTED: putative GATA transcription factor 22 [Sesamum indicum]867005770 (2)ref|XP_009604300.1|1e-27PREDICTED: putative GATA transcription factor 22 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF038M24+ CTACTGAGATGATGAAGATTATTGAAG
                      ____________________________________________________________
consensus CTACTGAGATGATGAAGATTATTGAAG
 
. : . : . : . : . : . :
rJMSF038M24+ ATCAGAAAAAGGGCTTCTTCTTGTTTGGAATCTGAGCATAGCAGCAACAGTTCCTCCAAT
                      ____________________________________________________________
consensus ATCAGAAAAAGGGCTTCTTCTTGTTTGGAATCTGAGCATAGCAGCAACAGTTCCTCCAAT
 
. : . : . : . : . : . :
rJMSF038M24+ CATAGTAGCAGTAATGTTGTCCCAATTAGGGTTTGTGCTGATTGTAACACTACCAAGACC
                      ____________________________________________________________
consensus CATAGTAGCAGTAATGTTGTCCCAATTAGGGTTTGTGCTGATTGTAACACTACCAAGACC
 
. : . : . : . : . : . :
rJMSF031K21+ AACGCGTGTGGAATAAGA
rJMSF038M24+ CCTCTTTGGAGAAGCGGTCCAAAAGGCCCTAAGTCGCTTTGCAACGCGTGTGGAATAAGA
                      ____________________________________________________________
consensus CCTCTTTGGAGAAGCGGTCCAAAAGGCCCTAAGTCGCTTTGCAACGCGTGTGGAATAAGA
 
. : . : . : . : . : . :
rJMSF031K21+ CAAAGAAAGGCGAGGCGAGCTATGGCCGCGGCCGCCGCAAAGGCGGCGGCTGCAGCGGCA
rJMSF038M24+ CAAAGAAAGGCGAGGCGAGCTATGGCCGCGGCCGCCGCAAAGGCGGCGGCTGCAGCGGCA
                      ____________________________________________________________
consensus CAAAGAAAGGCGAGGCGAGCTATGGCCGCGGCCGCCGCAAAGGCGGCGGCTGCAGCGGCA
 
. : . : . : . : . : . :
rJMSF031K21+ ACCGGAGCAGCAGAATCCTCACTGAACATCAATAAGGCGAAACCAACAAAAGAGAAGCCG
rJMSF038M24+ ACCGGAGCAGCAGAATCCTCACTGAACATCAATAAGGCGAAACCAACAAAAGAGAAGCCG
                      ____________________________________________________________
consensus ACCGGAGCAGCAGAATCCTCACTGAACATCAATAAGGCGAAACCAACAAAAGAGAAGCCG
 
. : . : . : . : . : . :
rJMSF031K21+ ACGACAGCGGCGGCGAAAAACCCCGCCACCGGCGTTAACCACCACCACCACCACGACGAA
rJMSF038M24+ ACGACAGCGGCGGCGAAAAACCCCGCCACCGGCGTTAACCACCACCACCACCACGACGAA
                      ____________________________________________________________
consensus ACGACAGCGGCGGCGAAAAACCCCGCCACCGGCGTTAACCACCACCACCACCACGACGAA
 
. : . : . : . : . : . :
rJMSF031K21+ GTCACGCCCTTCAAGAAACGCTACAAGATTGTGGCCGGCGAGCGGCCCTCCGACCACGAA
rJMSF038M24+ GTCACGCCCTTCAAGAAACGCTACAAGATTGTGGCCGGCGAGCGGCCCTCCGACCACGAA
                      ____________________________________________________________
consensus GTCACGCCCTTCAAGAAACGCTACAAGATTGTGGCCGGCGAGCGGCCCTCCGACCACGAA
 
. : . : . : . : . : . :
rJMSF031K21+ GCGAAGAAGACGAAGAAGAAGAAGAAGAATAAGATGAATGGGTTCGAGGATTTCTTGATA
rJMSF038M24+ GCGAAGAAGACGAAGAAGAAGAAGAAGAATAAGATGAATGGGTTCGAGGATTTCTTGATA
                      ____________________________________________________________
consensus GCGAAGAAGACGAAGAAGAAGAAGAAGAATAAGATGAATGGGTTCGAGGATTTCTTGATA
 
. : . : . : . : . : . :
rJMSF031K21+ AAACTGAGCAAAAACTCGGCGTATCACCGCGTTTTCCCGCAAGACGAGAAAGACGCCGCC
rJMSF038M24+ AAACTGAGCAAAAACTCGGCGTATCACCGCGTTTTCCCGCAAGACGAGAAAGACGCCGCC
                      ____________________________________________________________
consensus AAACTGAGCAAAAACTCGGCGTATCACCGCGTTTTCCCGCAAGACGAGAAAGACGCCGCC
 
. : . : . : . : . : . :
rJMSF031K21+ ATCTTGCTAATGGCCCTATCCTGCGGTCTGGTTCACAGCTAATTAACGACCCACCCACCA
rJMSF038M24+ ATCTTGCTAATGGCCCTATCCTGCGGTCTGGTTCACAGCTAATTAACGACCCACCCACCA
                      ____________________________________________________________
consensus ATCTTGCTAATGGCCCTATCCTGCGGTCTGGTTCACAGCTAATTAACGACCCACCCACCA
 
. : . : . : . : . : . :
rJMSF031K21+ GTTTCAATCATTACTTTCTTTCTTTCTTGGTCTGATCTGTTTGTTTAGCAGGTAGCTAGG
rJMSF038M24+ GTTTCAATCATTACTTTCTTTCTTTCTTGGTCTGATCTGTTTGTTTAGCAGGTAGCTAGG
                      ____________________________________________________________
consensus GTTTCAATCATTACTTTCTTTCTTTCTTGGTCTGATCTGTTTGTTTAGCAGGTAGCTAGG
 
. : . : . : . : . : . :
rJMSF031K21+ TAGATATATAGCTAGCCTAGCCTAGTTTGTGTGACAATGAGACATCATAGTTAAGTTAGA
rJMSF038M24+ TAGATATATAGCTAGCCTAGCCTAGTTTGTGTGACAATGAGACATCATAGTTAAGTTAGA
                      ____________________________________________________________
consensus TAGATATATAGCTAGCCTAGCCTAGTTTGTGTGACAATGAGACATCATAGTTAAGTTAGA
 
. : . : . : . : . : . :
rJMSF031K21+ ACGAGAAAATTAAGAATAATAATTAGTGGCAATAATGAACTCATCATCGTCTGTCGTACG
rJMSF038M24+ ACGAGAAAATTAAGAATAATAATTAGTGGCAATAATGAACTCATCATCGTCTGTCGTACG
                      ____________________________________________________________
consensus ACGAGAAAATTAAGAATAATAATTAGTGGCAATAATGAACTCATCATCGTCTGTCGTACG
 
. : . : . : . : . : . :
rJMSF031K21+ TCATCGTCGTCGTCCATGGCTAAGTTGAGATAGTATG
rJMSF038M24+ TCATCGTCGTCGTCCATGGCTAAGTTGAGATAGTATGGAACAAGAAAGGACGACACCATT
                      ____________________________________________________________
consensus TCATCGTCGTCGTCCATGGCTAAGTTGAGATAGTATGGAACAAGAAAGGACGACACCATT