| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF005D20 | Sequence | 342 | 011854 (11) | ref|XP_009771086.1| | 9e-26 | PREDICTED: subtilisin-like protease [Nicotiana sylvestris] | 310 | 005766 (3) | ref|XP_010066762.1| | 1e-12 | PREDICTED: ABC transporter G family member 21 [Eucalyptus grandis] gb|KCW64799.1 |
| JMSF035G14 | Sequence | 643 | 003800 (2) | ref|XP_009768130.1| | 4e-48 | PREDICTED: ABC transporter G family member 21-like [Nicotiana sylvestris] | 681 | 005766 (3) | ref|XP_010066762.1| | 1e-65 | PREDICTED: ABC transporter G family member 21 [Eucalyptus grandis] gb|KCW64799.1 |
| JMSF037O16 | Sequence | 647 | 003800 (2) | ref|XP_009768130.1| | 1e-49 | PREDICTED: ABC transporter G family member 21-like [Nicotiana sylvestris] | 719 | 005766 (3) | ref|XP_010096709.1| | 3e-89 | ABC transporter G family member 14 [Morus notabilis] gb|EXB65561.1| ABC transpor |
This contig is upended
. : . : . : . : . : . :
rJMSF037O16+ T
____________________________________________________________
consensus T
. : . : . : . : . : . :
rJMSF035G14+ CTCGGGAATGTACCGCCTCTCGT
rJMSF037O16+ TCCCACAAGAACGCCCAATGCTCATCCGGGAACGCTCCTCGGGAATGTACCGCCTCTCGT
____________________________________________________________
consensus TCCCACAAGAACGCCCAATGCTCATCCGGGAACGCTCCTCGGGAATGTACCGCCTCTCGT
. : . : . : . : . : . :
rJMSF035G14+ CCTACTACTTTGCCCGAACCGCAGGAGATTTGCCAATGGAGCTCATCCTCCCCACCATCT
rJMSF037O16+ CCTACTACTTTGCCCGAACCGCAGGAGATTTGCCAATGGAGCTCATCCTCCCCACCATCT
____________________________________________________________
consensus CCTACTACTTTGCCCGAACCGCAGGAGATTTGCCAATGGAGCTCATCCTCCCCACCATCT
. : . : . : . : . : . :
rJMSF035G14+ TCGTCACCGTTACTTACTGGATGGGCGGGCTAAAGCCCTCCCTCCCTCACCTTCTCCTTA
rJMSF037O16+ TCGTCACCGTTACTTACTGGATGGGCGGGCTAAAGCCCTCCCT-CCTCACCTTCTCCTTA
____________________________________________________________
consensus TCGTCACCGTTACTTACTGGATGGGCGGGCTAAAGCCCTCCCTCCCTCACCTTCTCCTTA
. : . : . : . : . : . :
rJMSF035G14+ ACCCTCCTGATCATACTCTTCAACGTGCTCGTCTCCCAGAGCCTCGGCCTCGCCCTCGGG
rJMSF037O16+ ACCCTCCTGATCATCCTCTTCAACGTGCTCGTCTCCCAGAGCCTCGGCCTCGCCCTCGGG
____________________________________________________________
consensus ACCCTCCTGATCATCCTCTTCAACGTGCTCGTCTCCCAGAGCCTCGGCCTCGCCCTCGGG
. : . : . : . : . : . :
rJMSF035G14+ GCCATCCTGATGGACGTTAAGCAGGCCGCCACGCTCTCATCGGTCACCATGCTCGTGTTC
rJMSF037O16+ GCCATCCTGATGGACGTTAAGCAGGCCGCCACGCTCTCATCGGTCACCATGCTCGTGTTC
____________________________________________________________
consensus GCCATCCTGATGGACGTTAAGCAGGCCGCCACGCTCTCATCGGTCACCATGCTCGTGTTC
. : . : . : . : . : . :
rJMSF035G14+ TTGTTGGTGAGTGGGTACTACATTCAACACATCCCTGCTTTCCTCACCTGGATGAAATAC
rJMSF037O16+ TTGTTGGTGAGTGGGTACTACATTCAACACATCCCTGCTTTCCTCACCTGGATGAAATAC
____________________________________________________________
consensus TTGTTGGTGAGTGGGTACTACATTCAACACATCCCTGCTTTCCTCACCTGGATGAAATAC
. : . : . : . : . : . :
rJMSF005D20+ TGGGGGTTCAGTACCCTGCAAATGAG
rJMSF035G14+ ACATCTTTTAGCCACTTCAGTTATAAGCTTCTTGTGGGGGTTCAGTACCCTGCAAATGAG
rJMSF037O16+ ACATCTTTTAGCCACTTCAGTTATAAGCTTCTTGTGGGGGTTCAGTACCCTGCAAATGAG
____________________________________________________________
consensus ACATCTTTTAGCCACTTCAGTTATAAGCTTCTTGTGGGGGTTCAGTACCCTGCAAATGAG
. : . : . : . : . : . :
rJMSF005D20+ GTTTATGAGTGTGGGGTTGGGAGGCAGTGTAGGGTGAGGGATTTTGAAGGGANTAAGTGT
rJMSF035G14+ GTTTATGAGTGTGGGGTTGGGAGGCAGTGTAGGGTGAGGGATTTTGAAGGGATTAAGTGT
rJMSF037O16+ GTTTATGAGTGTGGGGTTGGGAGGCAGTGTAGGGTGAGGGATTTTGAAGGGATTAAGTGT
____________________________________________________________
consensus GTTTATGAGTGTGGGGTTGGGAGGCAGTGTAGGGTGAGGGATTTTGAAGGGATTAAGTGT
. : . : . : . : . : . :
rJMSF005D20+ CTTGACATNGGTAACATNATGTTTGANGNTGCTGCTTTGGGTGCCATGCNNGNTGGGTTT
rJMSF035G14+ CTTGACATTGGTAACATGATGTTTGATGTTGCTGCTTTGGGTGCCATGCTTGTTGGGTTT
rJMSF037O16+ CTTGACATTGGTAACATGATGTTTGATGTTGCTGCTTTGGGTGCCATGCTTGTTGGGTTT
____________________________________________________________
consensus CTTGACATTGGTAACATGATGTTTGATGTTGCTGCTTTGGGTGCCATGCTTGTTGGGTTT
. : . : . : . : . : . :
rJMSF005D20+ AGGATCTTGGCNTATGNTGCCTNGAGGGTTCGATAGTTNTAAGGANGTTTATGGGAGCTG
rJMSF035G14+ AGGATCTTGGCCTATGTTGCCTTGAGGGTTCGATAGTTTTAAGGATGTTTATGGGAGCTG
rJMSF037O16+ AGGATCTTGGCCTATGTTGCCTTGAGGGTTCGATAGTTTTAAGGATGTTTATGGGAGCTG
____________________________________________________________
consensus AGGATCTTGGCCTATGTTGCCTTGAGGGTTCGATAGTTTTAAGGATGTTTATGGGAGCTG
. : . : . : . : . : . :
rJMSF005D20+ NTTATAATAATCTGAACACAACAGAGGNTATTAGGAGGGAGTAATACNTGATTAAGAGAN
rJMSF035G14+ ATTATAATAATCTGAACACAACAGAGGTTATTAGGAGGGAGTAATA-TTGATTAAGAGAT
rJMSF037O16+ ATTATAATAATCTGAACACAACAGAGGTTATTAGGAGGGAGTAATA-TTGATTAAGAGAT
____________________________________________________________
consensus ATTATAATAATCTGAACACAACAGAGGTTATTAGGAGGGAGTAATA-TTGATTAAGAGAT
. : . : . : . : . : . :
rJMSF005D20+ GTCTTCTGGAATCTCATCAGTCACTNTGAGAATNAAAGTGTAAA
rJMSF035G14+ GTCTTCTGGAATCTCATCAGTCACTCTGAGAATTAAAGTGTAAATTTGATATGTATTAC
rJMSF037O16+ GTCTTCTGGAATCTCATCAGTCACTCTGAGAATTAAAGTGTAAATTTGATATGTATTACT
____________________________________________________________
consensus GTCTTCTGGAATCTCATCAGTCACTCTGAGAATTAAAGTGTAAATTTGATATGTATTACT