Contig 005765:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003P22Sequence293009470 (2)ref|XP_009764631.1|2e-05PREDICTED: protein MIZU-KUSSEI 1 [Nicotiana sylvestris]198005765 (2)
JMSF037N14Sequence641009470 (2)ref|XP_009617994.1|2e-48PREDICTED: protein MIZU-KUSSEI 1 [Nicotiana tomentosiformis]244005765 (2)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003P22+                                                                GCNANT
                      ____________________________________________________________
consensus                                                                   GCNANT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003P22+          TTTTTCTTTTTTTTTTTTTCGGGGTGAAGGGTATATTTTAATTATCATCTTTAGATGTCA
rJMSF037N14+                TTTTTTTTTTTTTCGGGGTGAAGGGTATATTTTAATTATCATCTTTAGATGTCA
                      ____________________________________________________________
consensus             TTTTTCTTTTTTTTTTTTTCGGGGTGAAGGGTATATTTTAATTATCATCTTTAGATGTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003P22+          CAAAGTTGAATATAATGAATCCTCTGTGTAGCTAAGGGCATGGACATTATGGAGATGTAG
rJMSF037N14+          CAAAGTTGAATATAATGAATCCTCTGTGTAGCTAAGGGCATGGACATTATGGAGATGTAG
                      ____________________________________________________________
consensus             CAAAGTTGAATATAATGAATCCTCTGTGTAGCTAAGGGCATGGACATTATGGAGATGTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003P22+          TGATCTCCAATGTTGTTCTTTTTTCTACTACTACTACTACTTATCATCATGTTAAGGAAT
rJMSF037N14+          TGATCTCCAATGTTGTTCTTTTTTCTACTACTACTACTACTTATCATCATGTTAAGGAAT
                      ____________________________________________________________
consensus             TGATCTCCAATGTTGTTCTTTTTTCTACTACTACTACTACTTATCATCATGTTAAGGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF037N14+          TGAAGAAGATCCTTCCTGTTCATAGAATGGAGAAGAGCTGGGAATCCTTTGTATCAATTA
                      ____________________________________________________________
consensus             TGAAGAAGATCCTTCCTGTTCATAGAATGGAGAAGAGCTGGGAATCCTTTGTATCAATTA