Contig 005764:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF030E18Sequence625003798 (6)ref|XP_007226962.1|2e-46hypothetical protein PRUPE_ppa002618mg [Prunus persica] ref|XP_007226963.1| hypo711005764 (2)ref|XP_004252758.1|215PREDICTED: polyadenylate-binding protein 2-like [Solanum lycopersicum]
JMSF037L23Sequence695003798 (6)ref|XP_007226962.1|7e-62hypothetical protein PRUPE_ppa002618mg [Prunus persica] ref|XP_007226963.1| hypo737005764 (2)ref|XP_004252758.1|219PREDICTED: polyadenylate-binding protein 2-like [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF030E18+                                     TCGTGCCTTTAGTCCAGCAGGGTCAACAAGCCC
                      ____________________________________________________________
consensus                                        TCGTGCCTTTAGTCCAGCAGGGTCAACAAGCCC
 
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rJMSF030E18+          AACGTCAAGGTGGCAGGCGTGGAGCGGGACCTGGCCAACAAGCTCAGCAGCCTATGCCTT
                      ____________________________________________________________
consensus             AACGTCAAGGTGGCAGGCGTGGAGCGGGACCTGGCCAACAAGCTCAGCAGCCTATGCCTT
 
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rJMSF030E18+          TGATGCAACAGCAGATGCTTCCAAGGGGTAGGATGTACCGGTTTCCACCTGGCCGCAATG
                      ____________________________________________________________
consensus             TGATGCAACAGCAGATGCTTCCAAGGGGTAGGATGTACCGGTTTCCACCTGGCCGCAATG
 
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rJMSF030E18+          TGCCAGAGGTTCCTGTGCCTGGTGTGGGTGGAGGTATGCTTTCTGTTCCATATGATATGG
                      ____________________________________________________________
consensus             TGCCAGAGGTTCCTGTGCCTGGTGTGGGTGGAGGTATGCTTTCTGTTCCATATGATATGG
 
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rJMSF030E18+          GTGGAATCCTTCCTCGAGATGCTGCTACTATGGGACAGCCTGTGCCAATTACAGCACTTG
rJMSF037L23+                                                      CCAATTACAGCACTTG
                      ____________________________________________________________
consensus             GTGGAATCCTTCCTCGAGATGCTGCTACTATGGGACAGCCTGTGCCAATTACAGCACTTG
 
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rJMSF030E18+          CTAGTGCCCTTGCTAACGCACCACCCGAACAACAGAGGACTATGTTAGGTGAAAATCTGT
rJMSF037L23+          CTAGTGCCCTTGCTAACGCACCACCCGAACAACAGAGGACTATGTTAGGTGAAAATCTGT
                      ____________________________________________________________
consensus             CTAGTGCCCTTGCTAACGCACCACCCGAACAACAGAGGACTATGTTAGGTGAAAATCTGT
 
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rJMSF030E18+          ACCCGCTTGTCGATCAGTTGGAGCATGAGCACGCTGCCAAAGTAACTGGCATGCTGCTCG
rJMSF037L23+          ACCCGCTTGTCGATCAGTTGGAGCATGAGCACGCTGCCAAAGTAACTGGCATGCTGCTCG
                      ____________________________________________________________
consensus             ACCCGCTTGTCGATCAGTTGGAGCATGAGCACGCTGCCAAAGTAACTGGCATGCTGCTCG
 
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rJMSF030E18+          AGATGGACCAGACGGAGGTTTTGCATCTACTCGAATCACCAGAGGCTTTGAAGTCCAAAG
rJMSF037L23+          AGATGGACCAGACGGAGGTTTTGCATCTACTCGAATCACCAGAGGCTTTGAAGTCCAAAG
                      ____________________________________________________________
consensus             AGATGGACCAGACGGAGGTTTTGCATCTACTCGAATCACCAGAGGCTTTGAAGTCCAAAG
 
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rJMSF030E18+          TTGCAGAGGCTATGGATGTTTTGAGAAACGTTCAGCAG                      
rJMSF037L23+          TTGCAGAGGCTATGGATGTTTTGAGAAACGTTCAGCAGCAGGCAAGCAGCCCTGCTGATC
                      ____________________________________________________________
consensus             TTGCAGAGGCTATGGATGTTTTGAGAAACGTTCAGCAGCAGGCAAGCAGCCCTGCTGATC
 
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rJMSF037L23+          AACTCGCCTCTCTTTCCCTCAACGAAAACCTTGTTTCTTGAGTCCAGGCAGGAGGCCAGC
                      ____________________________________________________________
consensus             AACTCGCCTCTCTTTCCCTCAACGAAAACCTTGTTTCTTGAGTCCAGGCAGGAGGCCAGC
 
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rJMSF037L23+          GGTCCAAGTCCAAGGATGTCCGATGTTTAGATTATGGCAGGAGGCAGCGGTCCAAGGATG
                      ____________________________________________________________
consensus             GGTCCAAGTCCAAGGATGTCCGATGTTTAGATTATGGCAGGAGGCAGCGGTCCAAGGATG
 
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rJMSF037L23+          TCTGATGTTTAGATTATCTTATCGCCTTCCTTCCTTTTTAGTTCAGCTGGTAGTTTATTA
                      ____________________________________________________________
consensus             TCTGATGTTTAGATTATCTTATCGCCTTCCTTCCTTTTTAGTTCAGCTGGTAGTTTATTA
 
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rJMSF037L23+          GTAGTTTTGAGTATTATTATGGGATAATATTTCTTAGGTTTTCGAATGAGATTTGATATC
                      ____________________________________________________________
consensus             GTAGTTTTGAGTATTATTATGGGATAATATTTCTTAGGTTTTCGAATGAGATTTGATATC
 
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rJMSF037L23+          CTCTATCGCATTAGGTATTTTTTGATTTCATTAATGCTCTTATCTATGACATGAAGAGAG
                      ____________________________________________________________
consensus             CTCTATCGCATTAGGTATTTTTTGATTTCATTAATGCTCTTATCTATGACATGAAGAGAG