Contig 005756:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025D22Sequence418011069 (6)ref|XP_009773760.1|1e-10PREDICTED: probable methyltransferase PMT11 [Nicotiana sylvestris]697005756 (4)emb|CDY24949.1|2e-70BnaC03g22230D [Brassica napus]
JMFF037H14Sequence385011069 (6)ref|XP_009597736.1|4e-10PREDICTED: probable methyltransferase PMT11 [Nicotiana tomentosiformis] ref|XP_0717005756 (4)emb|CDP00136.1|5e-76unnamed protein product [Coffea canephora]
JMSF033I18Sequence653011069 (6)ref|XP_009597736.1|5e-10PREDICTED: probable methyltransferase PMT11 [Nicotiana tomentosiformis] ref|XP_0714005756 (4)gb|KDO69172.1|7e-99hypothetical protein CISIN_1g0059811mg, partial [Citrus sinensis] gb|KDO69173.1|
JMSF036O05Sequence700011069 (6)ref|XP_009773760.1|7e-41PREDICTED: probable methyltransferase PMT11 [Nicotiana sylvestris]712005756 (4)gb|KDO69172.1|3e-98hypothetical protein CISIN_1g0059811mg, partial [Citrus sinensis] gb|KDO69173.1|

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF025D22+ CNTTCACACAGGCTGAAA
rJMFF037H14+ TTCACACAGGCTGAAA
rJMSF033I18+ TGAAA
                      ____________________________________________________________
consensus CNTTCACACAGGCTGAAA
 
. : . : . : . : . : . :
rJMFF025D22+ ACCGTACATCTTGATGCTCAGATATCGAGAGTGGAGTTAGTTAGGGCAGAGTCAAGATAC
rJMFF037H14+ ACCGTACATCTTGATGCTCAGATATCGAGAGTGGAGCTAGTTAGGGCAGAGTCAAGATAC
rJMSF033I18+ NCCGTACATCTTGATGCTCAGATATCGAGAGTGGAGCTAGTTAGGGCAGAGTCAAGATAC
rJMSF036O05+ TCTTGATGCTCAGATATCGAGAGTGGAGCTAGTTAGGGCAGAGTCAAGATAC
                      ____________________________________________________________
consensus ACCGTACATCTTGATGCTCAGATATCGAGAGTGGAGCTAGTTAGGGCAGAGTCAAGATAC
 
. : . : . : . : . : . :
rJMFF025D22+ TGGAGGGATATAGTCGAGAGNTACATTCGCAGACTGGGTTGGGACAAATTCCAACTTCGA
rJMFF037H14+ TGGAGGGATATAGTCGAGAGCTACATTCGCAGACTGGGTTGGGACAAATTCCAACTTCGA
rJMSF033I18+ TGGAGGGATATAGTCGAGAGCTACATTCGCAGACTGGGTTGGGACAAATTCCAACTTCGA
rJMSF036O05+ TGGAGGGATATAGTCGAGAGCTACATTCGCAGACTGGGTTGGGACAAATTCCAACTTCGA
                      ____________________________________________________________
consensus TGGAGGGATATAGTCGAGAGCTACATTCGCAGACTGGGTTGGGACAAATTCCAACTTCGA
 
. : . : . : . : . : . :
rJMFF025D22+ AACGTGATGGACATGAGAGCCGGTTTTGGAGGGTTTGCTGAAGCANTGATTAACAATAAG
rJMFF037H14+ AACGTGATGGACATGAGAGCCGGTTTTGGAGGGTTTGCTGAAG-ACTGATTAACAATAAG
rJMSF033I18+ AACGTGATGGACATGAGAGCCGGTTTTGGAGGGTTTGCTGAAGCACTGATTAACAATAAG
rJMSF036O05+ AACGTGATGGACATGAGAGCCGGTTTTGGAGGGTTTGCTGAAGCACTGATTAACAATAAG
                      ____________________________________________________________
consensus AACGTGATGGACATGAGAGCCGGTTTTGGAGGGTTTGCTGAAGCACTGATTAACAATAAG
 
. : . : . : . : . : . :
rJMFF025D22+ CTGGAGTGTTGGGTCCTGAATGTTGTTCCCNTGAGTGGACCGAACACGTTGCCTGTTATA
rJMFF037H14+ CTGGAGTGTTGGGTCCTGAATGTTGTTCCCGTGAGTGGACCGAACACGTTGCCTGTTATA
rJMSF033I18+ CTGGAGTGTTGGGTCCTGAATGTTGTTCCCGTGAGTGGACCGAACACGTTGCCTGTTATA
rJMSF036O05+ CTGGAGTGTTGGGTCCTGAATGTTGTTCCCGTGAGTGGACCGAACACGTTGCCTGTTATA
                      ____________________________________________________________
consensus CTGGAGTGTTGGGTCCTGAATGTTGTTCCCGTGAGTGGACCGAACACGTTGCCTGTTATA
 
. : . : . : . : . : . :
rJMFF025D22+ TATGATCGCGGTNTCATTGGAGTTATGCNCGACTGGTGTGAACCATTTGACACCTATCCA
rJMFF037H14+ TATGATCGCGGTCTCATTGGAGTTATGCACGACTGGTGTGAACCATTTGACACCTATCCA
rJMSF033I18+ TATGATCGCGGTCTCATTGGAGTTATGCACGACTGGTGTGAACCATTTGACACCTATCCA
rJMSF036O05+ TATGATCGCGGTCTCATTGGAGTTATGCACGACTGGTGTGAACCATTTGACACCTATCCA
                      ____________________________________________________________
consensus TATGATCGCGGTCTCATTGGAGTTATGCACGACTGGTGTGAACCATTTGACACCTATCCA
 
. : . : . : . : . : . :
rJMFF025D22+ AGAACATATGACTTGCTGCATGCTAATGGCCTCTTCTCCATTGAAAGGAAAAGATGCAAT
rJMFF037H14+ AGAACATATGACTTGCTGCATGCTAATGGCCTCTTCTCCATTGAAAGGAAAAGATGCAAT
rJMSF033I18+ AGAACATATGACTTGCTGCATGCTAATGGCCTCTTCTCCATTGAAAGGAAAAGATGCAAT
rJMSF036O05+ AGAACATATGACTTGCTGCATGCTAATGGCCTCTTCTCCATTGAAAGGAAAAGATGCAAT
                      ____________________________________________________________
consensus AGAACATATGACTTGCTGCATGCTAATGGCCTCTTCTCCATTGAAAGGAAAAGATGCAAT
 
. : . : . : . : . : . :
rJMFF025D22+ GTATCGAGCATCATGGTTGAAATGGATCGCG-TTTGAGGCCCGGGGGGAAGGTATATGTT
rJMFF037H14+ GTATCGAGCATCATGGTTGAAATGGATCGCGTTTTGAGGCCCGGGGGGAAGGTATATGTT
rJMSF033I18+ GTATCGAGCATCATGGTTGAAATGGATCGCGTTTTGAGGCCCGGGGGGAAGGTATATGTT
rJMSF036O05+ GTATCGAGCATCATGGTTGAAATGGATCGCGTTTTGAGGCCCGGGGGGAAGGTATATGTT
                      ____________________________________________________________
consensus GTATCGAGCATCATGGTTGAAATGGATCGCGTTTTGAGGCCCGGGGGGAAGGTATATGTT
 
. : . : . : . : . : . :
rJMFF025D22+ CGCGATGTTGTTGGGATTATGGATGAGCTTGAAGAGGTTGGGAAGNCTGTGGGGTGGGAA
rJMFF037H14+ CGCGATGTTGTTGGGGTTATGGATGAGCTTGAAGAGGTTGGGAAGGCTGTGGGGTGGGAA
rJMSF033I18+ CGCGATGTTGTTGGGGTTATGGATGAGCTTGAAGAGGTTGGGAAGGCTGTGGGGTGGGAA
rJMSF036O05+ CGCGATGTTGTTGGGGTTATGGATGAGCTTGAAGAGGTTGGGAAGGCTGTGGGGTGGGAA
                      ____________________________________________________________
consensus CGCGATGTTGTTGGGGTTATGGATGAGCTTGAAGAGGTTGGGAAGGCTGTGGGGTGGGAA
 
. : . : . : . : . : . :
rJMFF025D22+ GTATCAGTGGAAGAAACCTCTGAAGGTCCTCATGCAAGTTATAGGGTCTTCACAGCTGAG
rJMFF037H14+ GTATCAGTGGAAGAAACCTCTGAAGGTCCTCATGCAAGTTATAGGGTCTTCACAGCTGAG
rJMSF033I18+ GTATCAGTGGAAGAAACCTCTGAAGGTCCTCATGCAAGTTATAGGGTCTTCACAGCTGAG
rJMSF036O05+ GTATCAGTGGAAGAAACCTCTGAAGGTCCTCATGCAAGTTATAGGGTCTTCACAGCTGAG
                      ____________________________________________________________
consensus GTATCAGTGGAAGAAACCTCTGAAGGTCCTCATGCAAGTTATAGGGTCTTCACAGCTGAG
 
. : . : . : . : . : . :
rJMFF025D22+ AAGAAACTCAAGTAGTGAACTATGAAACCAAGAGAAATCAAATGAATTTGTGGTTAGTTG
rJMFF037H14+ AAGAAACTCAAGTAGTGAACTATGAAACCAAGAGAAATCAAATGAATTTGTGGTTAGTTG
rJMSF033I18+ AAGAAACTCAAGTAGTGAACTATGAAACCAAGAGAAATCAAATGAATTTGTGGTTAGTTG
rJMSF036O05+ AAGAAACTCAAGTAGTGAACTATGAAACCAAGAGAAATCAAATGAATTTGTGGTTAGTTG
                      ____________________________________________________________
consensus AAGAAACTCAAGTAGTGAACTATGAAACCAAGAGAAATCAAATGAATTTGTGGTTAGTTG
 
. : . : . : . : . : . :
rJMFF025D22+ GAAGCTAAGCAAACAACTAACTTGTGTGGAAGATTTGTTATGTTATAGTTTTTGCATGCA
rJMFF037H14+ GAAGCTAAGCAAACAACTAACTTGTGTGGAAGATTTGTTATGTTATAGTTTTTGCATGCA
rJMSF033I18+ GAAGCTAAGCAAACAACTAACTTGTGTGGAAGATTTGTTATGTTATAGTTTTTGCATGCA
rJMSF036O05+ GAAGCTAAGCAAACAACTAACTTGTGTGGAAGATTTGTTATGTTATAGTTTTTGCATGCA
                      ____________________________________________________________
consensus GAAGCTAAGCAAACAACTAACTTGTGTGGAAGATTTGTTATGTTATAGTTTTTGCATGCA
 
. : . : . : . : . : . :
rJMFF025D22+ TACATAAATTGCATTATATC
rJMFF037H14+ TACATAAATTGCATTATATCATTAATTATGTTGTTGTAAGAT
rJMSF033I18+ TACATAAATTGCATTATATCATTAATTATGTTGTTGTAAGAT
rJMSF036O05+ TACATAAATTGCATTATATCATTAATTATGTTGTTGTAAGATGAATGATTGGAACTTGTT
                      ____________________________________________________________
consensus TACATAAATTGCATTATATCATTAATTATGTTGTTGTAAGATGAATGATTGGAACTTGTT