| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025D22 | Sequence | 418 | 011069 (6) | ref|XP_009773760.1| | 1e-10 | PREDICTED: probable methyltransferase PMT11 [Nicotiana sylvestris] | 697 | 005756 (4) | emb|CDY24949.1| | 2e-70 | BnaC03g22230D [Brassica napus] |
| JMFF037H14 | Sequence | 385 | 011069 (6) | ref|XP_009597736.1| | 4e-10 | PREDICTED: probable methyltransferase PMT11 [Nicotiana tomentosiformis] ref|XP_0 | 717 | 005756 (4) | emb|CDP00136.1| | 5e-76 | unnamed protein product [Coffea canephora] |
| JMSF033I18 | Sequence | 653 | 011069 (6) | ref|XP_009597736.1| | 5e-10 | PREDICTED: probable methyltransferase PMT11 [Nicotiana tomentosiformis] ref|XP_0 | 714 | 005756 (4) | gb|KDO69172.1| | 7e-99 | hypothetical protein CISIN_1g0059811mg, partial [Citrus sinensis] gb|KDO69173.1| |
| JMSF036O05 | Sequence | 700 | 011069 (6) | ref|XP_009773760.1| | 7e-41 | PREDICTED: probable methyltransferase PMT11 [Nicotiana sylvestris] | 712 | 005756 (4) | gb|KDO69172.1| | 3e-98 | hypothetical protein CISIN_1g0059811mg, partial [Citrus sinensis] gb|KDO69173.1| |
This contig is upended
. : . : . : . : . : . :
rJMFF025D22+ CNTTCACACAGGCTGAAA
rJMFF037H14+ TTCACACAGGCTGAAA
rJMSF033I18+ TGAAA
____________________________________________________________
consensus CNTTCACACAGGCTGAAA
. : . : . : . : . : . :
rJMFF025D22+ ACCGTACATCTTGATGCTCAGATATCGAGAGTGGAGTTAGTTAGGGCAGAGTCAAGATAC
rJMFF037H14+ ACCGTACATCTTGATGCTCAGATATCGAGAGTGGAGCTAGTTAGGGCAGAGTCAAGATAC
rJMSF033I18+ NCCGTACATCTTGATGCTCAGATATCGAGAGTGGAGCTAGTTAGGGCAGAGTCAAGATAC
rJMSF036O05+ TCTTGATGCTCAGATATCGAGAGTGGAGCTAGTTAGGGCAGAGTCAAGATAC
____________________________________________________________
consensus ACCGTACATCTTGATGCTCAGATATCGAGAGTGGAGCTAGTTAGGGCAGAGTCAAGATAC
. : . : . : . : . : . :
rJMFF025D22+ TGGAGGGATATAGTCGAGAGNTACATTCGCAGACTGGGTTGGGACAAATTCCAACTTCGA
rJMFF037H14+ TGGAGGGATATAGTCGAGAGCTACATTCGCAGACTGGGTTGGGACAAATTCCAACTTCGA
rJMSF033I18+ TGGAGGGATATAGTCGAGAGCTACATTCGCAGACTGGGTTGGGACAAATTCCAACTTCGA
rJMSF036O05+ TGGAGGGATATAGTCGAGAGCTACATTCGCAGACTGGGTTGGGACAAATTCCAACTTCGA
____________________________________________________________
consensus TGGAGGGATATAGTCGAGAGCTACATTCGCAGACTGGGTTGGGACAAATTCCAACTTCGA
. : . : . : . : . : . :
rJMFF025D22+ AACGTGATGGACATGAGAGCCGGTTTTGGAGGGTTTGCTGAAGCANTGATTAACAATAAG
rJMFF037H14+ AACGTGATGGACATGAGAGCCGGTTTTGGAGGGTTTGCTGAAG-ACTGATTAACAATAAG
rJMSF033I18+ AACGTGATGGACATGAGAGCCGGTTTTGGAGGGTTTGCTGAAGCACTGATTAACAATAAG
rJMSF036O05+ AACGTGATGGACATGAGAGCCGGTTTTGGAGGGTTTGCTGAAGCACTGATTAACAATAAG
____________________________________________________________
consensus AACGTGATGGACATGAGAGCCGGTTTTGGAGGGTTTGCTGAAGCACTGATTAACAATAAG
. : . : . : . : . : . :
rJMFF025D22+ CTGGAGTGTTGGGTCCTGAATGTTGTTCCCNTGAGTGGACCGAACACGTTGCCTGTTATA
rJMFF037H14+ CTGGAGTGTTGGGTCCTGAATGTTGTTCCCGTGAGTGGACCGAACACGTTGCCTGTTATA
rJMSF033I18+ CTGGAGTGTTGGGTCCTGAATGTTGTTCCCGTGAGTGGACCGAACACGTTGCCTGTTATA
rJMSF036O05+ CTGGAGTGTTGGGTCCTGAATGTTGTTCCCGTGAGTGGACCGAACACGTTGCCTGTTATA
____________________________________________________________
consensus CTGGAGTGTTGGGTCCTGAATGTTGTTCCCGTGAGTGGACCGAACACGTTGCCTGTTATA
. : . : . : . : . : . :
rJMFF025D22+ TATGATCGCGGTNTCATTGGAGTTATGCNCGACTGGTGTGAACCATTTGACACCTATCCA
rJMFF037H14+ TATGATCGCGGTCTCATTGGAGTTATGCACGACTGGTGTGAACCATTTGACACCTATCCA
rJMSF033I18+ TATGATCGCGGTCTCATTGGAGTTATGCACGACTGGTGTGAACCATTTGACACCTATCCA
rJMSF036O05+ TATGATCGCGGTCTCATTGGAGTTATGCACGACTGGTGTGAACCATTTGACACCTATCCA
____________________________________________________________
consensus TATGATCGCGGTCTCATTGGAGTTATGCACGACTGGTGTGAACCATTTGACACCTATCCA
. : . : . : . : . : . :
rJMFF025D22+ AGAACATATGACTTGCTGCATGCTAATGGCCTCTTCTCCATTGAAAGGAAAAGATGCAAT
rJMFF037H14+ AGAACATATGACTTGCTGCATGCTAATGGCCTCTTCTCCATTGAAAGGAAAAGATGCAAT
rJMSF033I18+ AGAACATATGACTTGCTGCATGCTAATGGCCTCTTCTCCATTGAAAGGAAAAGATGCAAT
rJMSF036O05+ AGAACATATGACTTGCTGCATGCTAATGGCCTCTTCTCCATTGAAAGGAAAAGATGCAAT
____________________________________________________________
consensus AGAACATATGACTTGCTGCATGCTAATGGCCTCTTCTCCATTGAAAGGAAAAGATGCAAT
. : . : . : . : . : . :
rJMFF025D22+ GTATCGAGCATCATGGTTGAAATGGATCGCG-TTTGAGGCCCGGGGGGAAGGTATATGTT
rJMFF037H14+ GTATCGAGCATCATGGTTGAAATGGATCGCGTTTTGAGGCCCGGGGGGAAGGTATATGTT
rJMSF033I18+ GTATCGAGCATCATGGTTGAAATGGATCGCGTTTTGAGGCCCGGGGGGAAGGTATATGTT
rJMSF036O05+ GTATCGAGCATCATGGTTGAAATGGATCGCGTTTTGAGGCCCGGGGGGAAGGTATATGTT
____________________________________________________________
consensus GTATCGAGCATCATGGTTGAAATGGATCGCGTTTTGAGGCCCGGGGGGAAGGTATATGTT
. : . : . : . : . : . :
rJMFF025D22+ CGCGATGTTGTTGGGATTATGGATGAGCTTGAAGAGGTTGGGAAGNCTGTGGGGTGGGAA
rJMFF037H14+ CGCGATGTTGTTGGGGTTATGGATGAGCTTGAAGAGGTTGGGAAGGCTGTGGGGTGGGAA
rJMSF033I18+ CGCGATGTTGTTGGGGTTATGGATGAGCTTGAAGAGGTTGGGAAGGCTGTGGGGTGGGAA
rJMSF036O05+ CGCGATGTTGTTGGGGTTATGGATGAGCTTGAAGAGGTTGGGAAGGCTGTGGGGTGGGAA
____________________________________________________________
consensus CGCGATGTTGTTGGGGTTATGGATGAGCTTGAAGAGGTTGGGAAGGCTGTGGGGTGGGAA
. : . : . : . : . : . :
rJMFF025D22+ GTATCAGTGGAAGAAACCTCTGAAGGTCCTCATGCAAGTTATAGGGTCTTCACAGCTGAG
rJMFF037H14+ GTATCAGTGGAAGAAACCTCTGAAGGTCCTCATGCAAGTTATAGGGTCTTCACAGCTGAG
rJMSF033I18+ GTATCAGTGGAAGAAACCTCTGAAGGTCCTCATGCAAGTTATAGGGTCTTCACAGCTGAG
rJMSF036O05+ GTATCAGTGGAAGAAACCTCTGAAGGTCCTCATGCAAGTTATAGGGTCTTCACAGCTGAG
____________________________________________________________
consensus GTATCAGTGGAAGAAACCTCTGAAGGTCCTCATGCAAGTTATAGGGTCTTCACAGCTGAG
. : . : . : . : . : . :
rJMFF025D22+ AAGAAACTCAAGTAGTGAACTATGAAACCAAGAGAAATCAAATGAATTTGTGGTTAGTTG
rJMFF037H14+ AAGAAACTCAAGTAGTGAACTATGAAACCAAGAGAAATCAAATGAATTTGTGGTTAGTTG
rJMSF033I18+ AAGAAACTCAAGTAGTGAACTATGAAACCAAGAGAAATCAAATGAATTTGTGGTTAGTTG
rJMSF036O05+ AAGAAACTCAAGTAGTGAACTATGAAACCAAGAGAAATCAAATGAATTTGTGGTTAGTTG
____________________________________________________________
consensus AAGAAACTCAAGTAGTGAACTATGAAACCAAGAGAAATCAAATGAATTTGTGGTTAGTTG
. : . : . : . : . : . :
rJMFF025D22+ GAAGCTAAGCAAACAACTAACTTGTGTGGAAGATTTGTTATGTTATAGTTTTTGCATGCA
rJMFF037H14+ GAAGCTAAGCAAACAACTAACTTGTGTGGAAGATTTGTTATGTTATAGTTTTTGCATGCA
rJMSF033I18+ GAAGCTAAGCAAACAACTAACTTGTGTGGAAGATTTGTTATGTTATAGTTTTTGCATGCA
rJMSF036O05+ GAAGCTAAGCAAACAACTAACTTGTGTGGAAGATTTGTTATGTTATAGTTTTTGCATGCA
____________________________________________________________
consensus GAAGCTAAGCAAACAACTAACTTGTGTGGAAGATTTGTTATGTTATAGTTTTTGCATGCA
. : . : . : . : . : . :
rJMFF025D22+ TACATAAATTGCATTATATC
rJMFF037H14+ TACATAAATTGCATTATATCATTAATTATGTTGTTGTAAGAT
rJMSF033I18+ TACATAAATTGCATTATATCATTAATTATGTTGTTGTAAGAT
rJMSF036O05+ TACATAAATTGCATTATATCATTAATTATGTTGTTGTAAGATGAATGATTGGAACTTGTT
____________________________________________________________
consensus TACATAAATTGCATTATATCATTAATTATGTTGTTGTAAGATGAATGATTGGAACTTGTT