| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002G24 | Sequence | 497 | 005755 (6) | ref|XP_009629502.1| | 2e-08 | PREDICTED: vesicle-associated protein 1-1-like [Nicotiana tomentosiformis] ref|X | |||||
| JMSF014H22 | Sequence | 483 | 023161 | ref|XP_009629502.1| | 3e-19 | PREDICTED: vesicle-associated protein 1-1-like [Nicotiana tomentosiformis] ref|X | 784 | 005755 (6) | ref|XP_006347836.1| | 2e-48 | PREDICTED: vesicle-associated protein 2-2-like [Solanum tuberosum] |
| JMSF036N15 | Sequence | 649 | 005755 (6) | ref|XP_009629502.1| | 2e-32 | PREDICTED: vesicle-associated protein 1-1-like [Nicotiana tomentosiformis] ref|X | 719 | 005755 (6) | ref|XP_004230148.1| | 1e-18 | PREDICTED: vesicle-associated protein 1-2-like [Solanum lycopersicum] |
| JMSF037N15 | Sequence | 583 | 005755 (6) | ref|XP_009629502.1| | 2e-12 | PREDICTED: vesicle-associated protein 1-1-like [Nicotiana tomentosiformis] ref|X | 362 | 005755 (6) | |||
This contig is upended
. : . : . : . : . : . :
JMSF037N15- NGCTTTCACTTCCCCCTCTCTCTCGCCTTCAGAGTCT
JMFF002G24- CCTTCAGAGTCT
JMSF036N15- GCTTTCACTTCCCCCTCTCTCTCGCCTTCAGAGTCT
____________________________________________________________
consensus NGCTTTCACTTCCCCCTCTCTCTCGCCTTCAGAGTCT
. : . : . : . : . : . :
JMSF037N15- CACTCTCGCCTCTCGGTGTTTCAGATCACCAAACGAACTCTCTCTCCGCATGTACATTCA
JMFF002G24- CACTCTCGCCTCTCGGTGTTTCAGATCACCAAACGAACTCTCTCTCCGCATGTACATTCA
JMSF036N15- CACTCTCGCCTCTCGGTGTTTCAGATCACCAAACGAACTCTCTCTCCGCATGTACATTCA
____________________________________________________________
consensus CACTCTCGCCTCTCGGTGTTTCAGATCACCAAACGAACTCTCTCTCCGCATGTACATTCA
. : . : . : . : . : . :
JMSF037N15- TATATACACAATTACATATGGATTGCTTAGGGTTTATCGATCGCATGTGTGAGCATTGGC
JMFF002G24- TATATACACAATTACATATGGATTGCTTAGGGTTTATCGATCGCATGTGTGAGCATTGGC
JMSF036N15- TATATACACAATTACATATGGATTGCTTAGGGTTTATCGATCGCATGTGTGAGCATTGGC
____________________________________________________________
consensus TATATACACAATTACATATGGATTGCTTAGGGTTTATCGATCGCATGTGTGAGCATTGGC
. : . : . : . : . : . :
JMSF037N15- GCTGAAAGCGACGGTGAATTGGCGTTCAATCTTTCAAAAAATTGCCAAGATTCCACGCAT
JMFF002G24- GCTGAAAGCGACGGTGAATTGGCGTTCAATCTTTCAAAAAATTGCCAAGATTCCACGCAT
JMSF036N15- GCTGAAAGCGACGGTGAATTGGCGTTCAATCTTTCAAAAAATTGCCAAGATTCCACGCAT
____________________________________________________________
consensus GCTGAAAGCGACGGTGAATTGGCGTTCAATCTTTCAAAAAATTGCCAAGATTCCACGCAT
. : . : . : . : . : . :
JMSF037N15- TAATTTCATCGCTCTCTGAAAAGGAATGCATTGAATTCAGTTCTCTTTATCCGATTCTTT
JMFF002G24- TAATTTCATCGCTCTCTGAAAAGGAATGCATTGAATTCAGTTCTCTTTATCCGATTCTTT
JMSF036N15- TAATTTCATCGCTCTCTGAAAAGGAATGCATTGAATTCAGTTCTCTTTATCCGATTCTTT
____________________________________________________________
consensus TAATTTCATCGCTCTCTGAAAAGGAATGCATTGAATTCAGTTCTCTTTATCCGATTCTTT
. : . : . : . : . : . :
JMSF037N15- CCCAATTGACAATCGCTATTGATTCCAGTTCCCGTTAGCTACACGCGTCGTCTTTGCATT
JMFF002G24- CCCAATTGACAATCGCTATTGATTCCAGTTCCCGTTAGCTACACGCGTCGTCTTTGCATT
JMSF036N15- CCCAATTGACAATCGCTATTGATTCCAGTTCCCGTTAGCTACACGCGTCGTCTTTGCATT
____________________________________________________________
consensus CCCAATTGACAATCGCTATTGATTCCAGTTCCCGTTAGCTACACGCGTCGTCTTTGCATT
. : . : . : . : . : . :
JMSF037N15- GAGTTAAGAGTTATATTGGACAGTTGCTAATACTGGTGTTACTGGATGCAAAGAGAATAA
JMFF002G24- GAGTTAAGAGTTATATTGGACAGTTGCTAATACTGGTGTTACTGGATGCAAAGAGAATAA
JMSF036N15- GAGTTAAGAGTTATATTGGACAGTTGCTAATACTGGTGTTACTGGATGCAAAGAGAATAA
____________________________________________________________
consensus GAGTTAAGAGTTATATTGGACAGTTGCTAATACTGGTGTTACTGGATGCAAAGAGAATAA
. : . : . : . : . : . :
JMSF037N15- AGGAGCAATGAGTTTTGATTTGNTGGATATTATACCCCGGGATGTCAAATTCACNTTTGA
JMFF002G24- AGGAGCAATGAGTTTTGATTTGTTGGATATTATACCCCGGGATGTCAAATTCACATTTGA
JMSF036N15- AGGAGCAATGAGTTTTGATTTGTTGGATATTATACCCCGGGATGTCAAATTCACATTTGA
____________________________________________________________
consensus AGGAGCAATGAGTTTTGATTTGTTGGATATTATACCCCGGGATGTCAAATTCACATTTGA
. : . : . : . : . : . :
JMSF037N15- ATCAAAGAAGCAAAGTACATGCACTATTCGTCTTGCCAATAAGTCTGACNAGGATGTTTG
JMFF002G24- ATCAAAGAAGCAAAGTACATGCACTATTCGTCTTGCCAATAAGTCTGACAAGGATG-TT
JMSF036N15- ATCAAAGAAGCAAAGTACATGCACTATTCGTCTTGCCAATAAGTCTGACAAGGATG-TTG
____________________________________________________________
consensus ATCAAAGAAGCAAAGTACATGCACTATTCGTCTTGCCAATAAGTCTGACAAGGATG-TTG
. : . : . : . : . : . :
JMSF037N15- CTTTTAAGGTCAAGACTACAAATCCGAAGAAATATTCTGTCCGACCAAATGCGGGGGTCC
JMSF036N15- CTTTTAAGGTCAAGACTACAAATCCGAAGAAATATTCTGTCCGACCAAATGCGGGGGTCC
____________________________________________________________
consensus CTTTTAAGGTCAAGACTACAAATCCGAAGAAATATTCTGTCCGACCAAATGCGGGGGTCC
. : . : . : . : . : . :
JMSF037N15- TTAG
JMSF036N15- TTAGTCCTAAGTCATCCTGTGATTTTACAATAACTATGCAAGCACAACGGGAGCCACCTC
rJMSF014H22+ TTTACAATAACTATGCCAGCACAACGGGAGCCACCTC
____________________________________________________________
consensus TTAGTCCTAAGTCATCCTGTGATTTTACAATAACTATGCCAGCACAACGGGAGCCACCTC
. : . : . : . : . : . :
JMSF036N15- CTGATATGATATG
rJMSF014H22+ CTGATATGATATGCAAGGACAAGTTCTTAGTTCAAGGCGCAACTGTCCCTGAGGGAACTA
____________________________________________________________
consensus CTGATATGATATGCAAGGACAAGTTCTTAGTTCAAGGCGCAACTGTCCCTGAGGGAACTA
. : . : . : . : . : . :
rJMSF014H22+ CAGAAGAGGATATTACCTCAGAGATGTTTGCTAAAGATGATGGCAAATATGTGCAAGAGA
____________________________________________________________
consensus CAGAAGAGGATATTACCTCAGAGATGTTTGCTAAAGATGATGGCAAATATGTGCAAGAGA
. : . : . : . : . : . :
rJMSF014H22+ ACAAACTGAGGGTGATCCTTGTCATTCCATCCGAGACACCAGTACAGTCACCAATGAATG
____________________________________________________________
consensus ACAAACTGAGGGTGATCCTTGTCATTCCATCCGAGACACCAGTACAGTCACCAATGAATG
. : . : . : . : . : . :
rJMSF014H22+ GAGTGCACAGTCATCAATCAAGAAGTGTGCTTGCTGATGATGTCTTTGGCAGTGCAAAAT
____________________________________________________________
consensus GAGTGCACAGTCATCAATCAAGAAGTGTGCTTGCTGATGATGTCTTTGGCAGTGCAAAAT
. : . : . : . : . : . :
rJMSF014H22+ TCGGTGCACTTCCAGAAGAAAATGGCAAGGAGTTGCTGGAAGCAAAGCTTTTAGAGAGTA
____________________________________________________________
consensus TCGGTGCACTTCCAGAAGAAAATGGCAAGGAGTTGCTGGAAGCAAAGCTTTTAGAGAGTA
. : . : . : . : . : . :
rJMSF014H22+ AATCCAGGAAGGATATGGAAGAGCTGGAATCTTTCAAGGAGGCAATGAAGTCAAAACTTA
rJMSF036N15+ AATCCAGGAAGGATATGGAAGAGCTGGAATCTTTCAAGGAGGCAATGAAGTCAAAACTTA
____________________________________________________________
consensus AATCCAGGAAGGATATGGAAGAGCTGGAATCTTTCAAGGAGGCAATGAAGTCAAAACTTA
. : . : . : . : . : . :
rJMSF014H22+ ATTCACTTGAACTACAATTAAGTGCGGCTGAAGCAAGCATTGCTAGGCTGACAGAGGAGA
rJMSF036N15+ ATTCACTTGAACTACAATTAAGTGCGGCTGAAGCAAGCATTGCTAGGCTGACAGAGGAGA
____________________________________________________________
consensus ATTCACTTGAACTACAATTAAGTGCGGCTGAAGCAAGCATTGCTAGGCTGACAGAGGAGA
. : . : . : . : . : . :
rJMSF014H22+ GAAAAGAGATTGCTCGGGAGAGAGAGAGTTTACAACGAGAATTGGCGGTAATGACAAGTA
rJMSF037N15+ AATTGGCGGTAATGACAAGTA
rJMSF036N15+ GAAAAGAGATTGCTCGGGAGAGAGAGAGTTTACAACGAGAATTGGCGGTAATGACAAGTA
____________________________________________________________
consensus GAAAAGAGATTGCTCGGGAGAGAGAGAGTTTACAACGAGAATTGGCGGTAATGACAAGTA
. : . : . : . : . : . :
rJMSF014H22+ AGAAGGTTGTCAAAAAAGTGCAAGTTGGATTTCCTT-TGATGTATCTGCTGATGGTTGCG
rJMSF037N15+ AGAAGGTNGTCAAAAAAGTGCAAGTTGGATTTCCTTNTGATGTATCTGCTGATGGTTGCG
rJMSF036N15+ AGAAGGTTGTCAAAAAAGTGCAAGTTGGATTTCCTT-TGATGTATCTGCTGATGGTTGCG
____________________________________________________________
consensus AGAAGGTTGTCAAAAAAGTGCAAGTTGGATTTCCTT-TGATGTATCTGCTGATGGTTGCG
. : . : . : . : . : . :
rJMSF014H22+ GTCTTTAGTTTGACAGTTGGATGCCTTTTACGTCATTTATAGAAGCAGCTATTGCCAATG
rJMSF037N15+ GTCTTTAGTNTGACAGTTGGATGCCNTNTACGTCATTTATAGAAGCAGCTATTGCCAATG
rJMSF036N15+ GTCTTTAGTTTGACAGTTGGATGCCTTTTACGTCATTTATAGAAGCAGCTATTGCCAATG
____________________________________________________________
consensus GTCTTTAGTTTGACAGTTGGATGCCTTTTACGTCATTTATAGAAGCAGCTATTGCCAATG
. : . : . : . : . : . :
rJMSF014H22+ CGTATATTAGAGCGAACTTTTCATCACTATGTAGCTAGGTATCTTCCAGTTCAGTTCCAC
rJMSF037N15+ CGTATATTNGAGCGAACTTTTCATCANTATGTAGCTAGGTATCTTCCAGTTCAGTTCCAC
rJMSF036N15+ CGTATATTAGAGCGAACTTTTCATCACTATGTAGCTAGGTATCTTCCAGTTCAGTTCCAC
____________________________________________________________
consensus CGTATATTAGAGCGAACTTTTCATCACTATGTAGCTAGGTATCTTCCAGTTCAGTTCCAC
. : . : . : . : . : . :
rJMSF014H22+ ATAAAGTCCTGTCTACATGAGGTGACATTATATCTTTTTCCTGTATTTCCAAGTGAGTGA
rJMSF037N15+ ATAANGTCCTGTCTACATGAGGTGACATTATATCTTTTTCCTGTATTTCCAAGTGAGTGA
rJMSF036N15+ ATAAAGTCCTGTCTACATGAGGTGACATTATATCTTTTTCCTGTATTTCCAAGTGAGTGA
____________________________________________________________
consensus ATAAAGTCCTGTCTACATGAGGTGACATTATATCTTTTTCCTGTATTTCCAAGTGAGTGA
. : . : . : . : . : . :
rJMSF014H22+ GTAATGACTCATTATAACATTTA
rJMSF037N15+ GTAATGACTCATTATNACATTTACNGTGGTAAATACTCTTTTCTCTATAATAAGCATTGT
rJMSF036N15+ GTAATGACTCATTATAACATTTACTGTTGTAAATACTCTTTTCTCTATAATAAGCATTGT
____________________________________________________________
consensus GTAATGACTCATTATAACATTTACTGTTGTAAATACTCTTTTCTCTATAATAAGCATTGT
. : . : . : . : . : . :
rJMSF037N15+ ATAGCAAATGTCCCCTTCGATCGGCTGGGTAATATTGAAGC
rJMSF036N15+ ATAGCAAATGTCCCCTTCGATCGGCTGGGTAATATTGAAGCTTTACAGATACAATGGCTG
____________________________________________________________
consensus ATAGCAAATGTCCCCTTCGATCGGCTGGGTAATATTGAAGCTTTACAGATACAATGGCTG
. : . : . : . : . : . :
rJMSF036N15+ AATGGCAAAATGGAAATTTGAGTGCGTGCTGGATTGGAGGCCGATGGTTTTGGTGGCAAA
____________________________________________________________
consensus AATGGCAAAATGGAAATTTGAGTGCGTGCTGGATTGGAGGCCGATGGTTTTGGTGGCAAA
. : . : . : . : . : . :
rJMSF036N15+ ATGGAAATTGGAGCAAAATAGAGAAATAGTGATGATAAATTTGTCTGATGATGTCAGCGT
____________________________________________________________
consensus ATGGAAATTGGAGCAAAATAGAGAAATAGTGATGATAAATTTGTCTGATGATGTCAGCGT
. : . : . : . : . : . :
rJMSF036N15+ GGGTTTTGAAGAGAGAATATTTAGGGGTTGATGATGATGATTGATTGTATGAACTACTCC
____________________________________________________________
consensus GGGTTTTGAAGAGAGAATATTTAGGGGTTGATGATGATGATTGATTGTATGAACTACTCC