Contig 005752:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008J11Sequence327004981 (6)778005752 (3)ref|XP_008243378.1|132PREDICTED: uncharacterized protein LOC103341609 [Prunus mume]
JMSF034G14Sequence637004981 (6)emb|CDO98350.1|3e-25unnamed protein product [Coffea canephora]726005752 (3)ref|XP_008243378.1|132PREDICTED: uncharacterized protein LOC103341609 [Prunus mume]
JMSF036H07Sequence700004981 (6)751005752 (3)ref|XP_008243378.1|132PREDICTED: uncharacterized protein LOC103341609 [Prunus mume]

Alignment

This contig is upended


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rJMSF034G14+                                       GGCATGCATGCATTNTAGCAAGCTCCCAATA
rJMSF008J11+            TGAGGTTTCGATCTGTNTGCTNTTATTGGCATGCATGCATTCTAGCAAGCTCCCAATA
rJMSF036H07+                                       GGCATGCATGCATTCTAGCCAGCTCCCAATA
                      ____________________________________________________________
consensus               TGAGGTTTCGATCTGTNTGCTNTTATTGGCATGCATGCATTCTAGCAAGCTCCCAATA
 
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rJMSF034G14+          ATAGATTCATGGTTTTAAATGGCTGTATCAGTATTATTGCAGGTTTGTGTTATAGCTTTC
rJMSF008J11+          ATAGATTCATGGTTTTAAATGGCTGTATCAGTATTATTGCAGGTTTGTGTTATAGCTTTC
rJMSF036H07+          ATAGATTCATGGTTTTAAATGGCTGTATCAGTATTATTGCAGGTTTGTGTTATAGCTTTC
                      ____________________________________________________________
consensus             ATAGATTCATGGTTTTAAATGGCTGTATCAGTATTATTGCAGGTTTGTGTTATAGCTTTC
 
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rJMSF034G14+          ATGTCTGTTATCTGGTATGTAGTCGGGGGAAATTTCGATGGATTTCAAGAGAGTGATATC
rJMSF008J11+          ATGTCTGTTATCTGGTATGTAGTCGGGGGAAATTTCGATGGATTTCAAGAGAGTGATATC
rJMSF036H07+          ATGTCTGTTATCTGGTATGTAGTCGGGGGAAATTTCGATGGATTTCAAGAGAGTGATATC
                      ____________________________________________________________
consensus             ATGTCTGTTATCTGGTATGTAGTCGGGGGAAATTTCGATGGATTTCAAGAGAGTGATATC
 
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rJMSF034G14+          AGTGGTGGATGGTCTTGGAGCATGTTTTGTGAGTGGATGGTTGCATTTCCTTGGATACCT
rJMSF008J11+          AGTGGTGGATGGTCTTGGAGCATGTTTTGTGAGTGGATGGTTGCATTTCCTTGGATACCT
rJMSF036H07+          AGTGGTGGATGGTCTTGGAGCATGTTTTGTGAGTGGATGGTTGCATTTCCTTGGATACCT
                      ____________________________________________________________
consensus             AGTGGTGGATGGTCTTGGAGCATGTTTTGTGAGTGGATGGTTGCATTTCCTTGGATACCT
 
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rJMSF034G14+          ACACTGTATACTGGTGTATTTTCCACTGGTTTATGCCTCTGGGGTGAAGTAAGTATATAT
rJMSF008J11+          ACACTGTATACTGGTGTATTTTCCACTGGTTTATGCCTCTGGGGTGAAGTAAGTATATAT
rJMSF036H07+          ACACTGTATACTGGTGTATTTTCCACTGGTTTATGCCTCTGGGGTGAAGTAAGTATATAT
                      ____________________________________________________________
consensus             ACACTGTATACTGGTGTATTTTCCACTGGTTTATGCCTCTGGGGTGAAGTAAGTATATAT
 
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rJMSF034G14+          CATCTTCCAAAAGACCAAAACCCCTCACTCTCACAAGTTCTAACAGATTATTGCTTTCAT
rJMSF008J11+          CATCTTCCAAAAGACCAAAACCCCTCACTCTCACAAGTTCTAACAGATTATTGCTTTCAT
rJMSF036H07+          CATCTTCCAAAAGACCAAAACCCCTCACTCTCACAAGTTCTAACAGATTATTGCTTTCAT
                      ____________________________________________________________
consensus             CATCTTCCAAAAGACCAAAACCCCTCACTCTCACAAGTTCTAACAGATTATTGCTTTCAT
 
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rJMSF034G14+          TTCAACAAACCTAACTAACCAAACCGGTGCAGATTGCAGCAATGCGCGACGTTTCAGCCA
rJMSF008J11+          TTCAACAAACCTAACTAACCAAACCGGTGCAGATTGCAGCAATGCGCGACGTTTCAGCCA
rJMSF036H07+          TTCAACAAACCTAACTAACCAAACCGGTGCAGATTGCAGCAATGCGCGACGTTTCAGCCA
                      ____________________________________________________________
consensus             TTCAACAAACCTAACTAACCAAACCGGTGCAGATTGCAGCAATGCGCGACGTTTCAGCCA
 
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rJMSF034G14+          CAGAAACAGCAGTGATATATGGGTTAGAGCCATTGTGGGGGGCTGCTTTTGCCTGGTTTC
rJMSF008J11+          CAGAAACAGCAGTGATATATGGGTTAGAGCCATTGTGGGGGGCTGCTTTTGCCTGGTTTC
rJMSF036H07+          CAGAAACAGCAGTGATATATGGGTTAGAGCCATTGTGGGGGGCTGCTTTTGCCTGGTTTC
                      ____________________________________________________________
consensus             CAGAAACAGCAGTGATATATGGGTTAGAGCCATTGTGGGGGGCTGCTTTTGCCTGGTTTC
 
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rJMSF034G14+          TCCTTGGTGAAAGATGGGGCTTAGCTGGATGGATAGGAGCAGCCCTAGTATTAGGGGGAA
rJMSF008J11+          TCCTTGGTGAAAGATGGGGCTTAGCTGGATGGATAGGAGCAGCCCTAGTATTAGGGGGAA
rJMSF036H07+          TCCTTGGTGAAAGATGGGGCTTAGCTGGATGGATAGGAGCAGCCCTAGTATTAGGGGGAA
                      ____________________________________________________________
consensus             TCCTTGGTGAAAGATGGGGCTTAGCTGGATGGATAGGAGCAGCCCTAGTATTAGGGGGAA
 
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rJMSF034G14+          GCTTGACACTCCAAATTTTGGGATCTTATAGTGAAACAACAAAGGGGAGTAGTCACAAAA
rJMSF008J11+          GCTTGACACTCCAAATTTTGGGATCTTATAGTGAAACAACAAAGGGGAGTAGTCACAAAA
rJMSF036H07+          GCTTGACACTCCAAATTTTGGGATCTTATAGTGAAACAACAAAGGGGAGTAGTCACAAAA
                      ____________________________________________________________
consensus             GCTTGACACTCCAAATTTTGGGATCTTATAGTGAAACAACAAAGGGGAGTAGTCACAAAA
 
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rJMSF034G14+          AAGCTTCACAACACAAAACCCTACCAAACTCAAACTCACTCTCAGCTTCTCCTGTGGTCA
rJMSF008J11+          AAGCTTCACAACACAAAACCCTACCAAACTCAAACTCACTCTCAGCTTCTCCTGTGGTCA
rJMSF036H07+          AAGCTTCACAACACAAAACCCTACCAAACTCAAACTCACTCTCAGCTTCTCCTGTGGTCA
                      ____________________________________________________________
consensus             AAGCTTCACAACACAAAACCCTACCAAACTCAAACTCACTCTCAGCTTCTCCTGTGGTCA
 
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rJMSF034G14+          TCTCTTCAGACCACAACTTGGTTGACAGGTTGAACAAATAGTAAACCTATTATATATATG
rJMSF008J11+          TCTCTTCAGACCACAACTTGGTTGACAGGTTGAACAAATAGTAAACCTATTATATATATG
rJMSF036H07+          TCTCTTCAGACCACAACTTGGTTGACAGGTTGAACAAATAGTAAACCTATTATATATATG
                      ____________________________________________________________
consensus             TCTCTTCAGACCACAACTTGGTTGACAGGTTGAACAAATAGTAAACCTATTATATATATG
 
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rJMSF034G14+          TGTACATATCTGCTAAAAGTCGGCACGGAACATTT                         
rJMSF008J11+          TGTACATATCTGCTAAAAGTCGGCACGGAACATTTATATTTTATATGTAATAAGTCGGCA
rJMSF036H07+          TGTACATATCTGCTAAAAGTCGGCACGGAACATTTATATTTTATATGTAATAAGTCGGCA
                      ____________________________________________________________
consensus             TGTACATATCTGCTAAAAGTCGGCACGGAACATTTATATTTTATATGTAATAAGTCGGCA