Contig 005748:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF016G14-                                           GAAGGAAACCCTTCCTCGATTCAACTCT
JMSF035L22-                                           GAAGGAAACCCTTCCTCGATTCAACTCT
                      ____________________________________________________________
consensus                                             GAAGGAAACCCTTCCTCGATTCAACTCT
 
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JMSF016G14-           TAACGTCGTCATCGCGAAAATCAGCTCTCGTTGCTTAGAAACTTCGTCCACAGCTTCCCC
JMSF035L22-           TAACGTCGTCATCGCGAAAATCAGCTCTCGTTGCTTAGAAACTTCGTCCACAGCTTCCCC
                      ____________________________________________________________
consensus             TAACGTCGTCATCGCGAAAATCAGCTCTCGTTGCTTAGAAACTTCGTCCACAGCTTCCCC
 
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JMSF016G14-           TTTGGTTGAAGACTCAAAGTCATATCATTACATTCCCAACGCTTTCCGGTTCGACATTTT
JMSF035L22-           TTTGGTTGAAGACTCAAAGTCATATCATTACATTCCCAACGCTTTCCGGTTCGACATTTT
                      ____________________________________________________________
consensus             TTTGGTTGAAGACTCAAAGTCATATCATTACATTCCCAACGCTTTCCGGTTCGACATTTT
 
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JMSF016G14-           CTCTCCCGTACACATATATCATCACGATTTCGATCTCCGGCTTCTAGCTTGAATTCGCGA
JMSF035L22-           CTCTCCCGTACACATATATCATCACGATTTCGATCTCCGGCTTCTAGCTTGAATTCGCGA
                      ____________________________________________________________
consensus             CTCTCCCGTACACATATATCATCACGATTTCGATCTCCGGCTTCTAGCTTGAATTCGCGA
 
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JMSF016G14-           CCCTCAATCTCACGCTAACCCGACAAAAGTCGCAGAACAGGAAAATGAAGAGAGTCTTCG
JMSF035L22-           CCCTCAATCTCACGCTAACCCGACAAAAGTCGCAGAACAGGAAAATGAAGAGAGTCTTCG
                      ____________________________________________________________
consensus             CCCTCAATCTCACGCTAACCCGACAAAAGTCGCAGAACAGGAAAATGAAGAGAGTCTTCG
 
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JMSF016G14-           GTGTTAAGAAAGACAAAGAGCCTCCTCCCTCTATTCAAGACGCTTCCGATCGGATTAATA
JMSF035L22-           GTGTTAAGAAAGACAAAGAGCCTCCTCCCTCTATTCAAGACGCTTCCGATCGGATTAATA
rJMSF016G14+                                        CTATTCAAGACGCTTCCGATCGGATTAATA
                      ____________________________________________________________
consensus             GTGTTAAGAAAGACAAAGAGCCTCCTCCCTCTATTCAAGACGCTTCCGATCGGATTAATA
 
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JMSF016G14-           AAAGAGGTGACACCGTGGAGGATAAAATCAAGAAGCTGGATGCTGAACTTGCAAGATACA
JMSF035L22-           AAAGAGGTGACACCGTGGAGGATAAAATCAAGAAGCTGGATGCTGAACTTGCAAGATACA
rJMSF016G14+          AAAGAGGTGACACCGTGGAGGATAAAATCAAGAAGCTGGATGCTGAACTTGCAAGATACA
                      ____________________________________________________________
consensus             AAAGAGGTGACACCGTGGAGGATAAAATCAAGAAGCTGGATGCTGAACTTGCAAGATACA
 
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JMSF016G14-           AAGAGCAGATAAAGAAGACCAGGCCTGGTCCAGCTCAAGAGGCCGTCAAAGCTCGAGCCA
JMSF035L22-           AAGAGCAGATAAAGAAGACCAGGCCTGGTCCAGCTCAAGAGGCCGTCAAAGCTCGAGCCA
rJMSF016G14+          AAGAGCAGATAAAGAAGACCAGGCCTGGTCCAGCTCAAGAGGCCGTCAAAGCTCGAGCCA
rJMSF035L22+                                      TCCAGCTCAAGAGGCCGTCAAAGCTCGAGCCA
                      ____________________________________________________________
consensus             AAGAGCAGATAAAGAAGACCAGGCCTGGTCCAGCTCAAGAGGCCGTCAAAGCTCGAGCCA
 
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JMSF016G14-           TGAGGGTTCTCAAGCAAAAGAGAATGTATGAAGGTCAGCGTGATATGCTCTATAATCAGA
JMSF035L22-           TGAGGGTTCTCAAGCAAAAGAGAATGTATGAAGGTCAGCGTGATATGCTCTATAATCAGA
rJMSF016G14+          TGAGGGTTCTCAAGCAAAAGAGAATGTATGAAGGTCAGCGTGATATGCTCTATAATCAGA
rJMSF035L22+          TGAGGGTTCTCAAGCAAAAGAGAATGTATGAAGGTCAGCGTGATATGCTCTATAATCAGA
                      ____________________________________________________________
consensus             TGAGGGTTCTCAAGCAAAAGAGAATGTATGAAGGTCAGCGTGATATGCTCTATAATCAGA
 
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JMSF016G14-           CATTCAACCTAGACCAAGTTGCATTTGCTTCTGAG                         
JMSF035L22-           CATTCAACCTAGACCAAGTTGCATTTGCTTCTGAGGGGATCAAAGATGCTCAGCAAACAA
rJMSF016G14+          CATTCAACCTAGACCAAGTTGCATTTGCTTCTGAGGGGATCAAAGATGCTCAGCAAACAA
rJMSF035L22+          CATTCAACCTAGACCAAGTTGCATTTGCTTCTGAGGGGATCAAAGATGCTCAGCAAACAA
                      ____________________________________________________________
consensus             CATTCAACCTAGACCAAGTTGCATTTGCTTCTGAGGGGATCAAAGATGCTCAGCAAACAA
 
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JMSF035L22-           TGTCAGCTTTGAAATCGGCTAATAAAGAGTTGAAAGGAATGATGAAGACTGTGAAGATTC
rJMSF016G14+          TGTCAGCTTTGAAATCGGCTAATAAAGAGTTGAAAGGAATGATGAAGACTGTGAAGATTC
rJMSF035L22+          TGTCAGCTTTGAAATCGGCTAATAAAGAGTTGAAAGGAATGATGAAGACTGTGAAGATTC
                      ____________________________________________________________
consensus             TGTCAGCTTTGAAATCGGCTAATAAAGAGTTGAAAGGAATGATGAAGACTGTGAAGATTC
 
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JMSF035L22-           AAGACATTGATAAC                                              
rJMSF016G14+          AAGACATTGATAACTTGCAAGATGAAATGATGGACCTTATGGATGTTAGCAATGAAATCC
rJMSF035L22+          AAGACATTGATAACTTGCAAGATGAAATGATGGACCTTATGGATGTTAGCAATGAAATCC
                      ____________________________________________________________
consensus             AAGACATTGATAACTTGCAAGATGAAATGATGGACCTTATGGATGTTAGCAATGAAATCC
 
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rJMSF016G14+          AAGAAACCCTTGGTAGAAGCTACAGTGTTCCAGAGGACATTGATGAAGAAGAACTCATGG
rJMSF035L22+          AAGAAACCCTTGGTAGAAGCTACAGTGTTCCAGAGGACATTGATGAAGAAGAACTCATGG
                      ____________________________________________________________
consensus             AAGAAACCCTTGGTAGAAGCTACAGTGTTCCAGAGGACATTGATGAAGAAGAACTCATGG
 
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rJMSF016G14+          GTGAGCTTGATGCTTTGGAAGCGGACATGGAAAGTGAAGGTGACAGTGTCCCTTCATACC
rJMSF035L22+          GTGAGCTTGATGCTTTGGAAGCGGACATGGAAAGTGAAGGTGACAGTGTCCCTTCATACC
                      ____________________________________________________________
consensus             GTGAGCTTGATGCTTTGGAAGCGGACATGGAAAGTGAAGGTGACAGTGTCCCTTCATACC
 
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rJMSF016G14+          TTCAACCAGACAAGGAGCCCGATTACTCAGAGCTTAACTTGCCAGCAGCACCAACTGGCC
rJMSF035L22+          TTCAACCAGACAAGGAGCCCGATTACTCAGAGCTTAACTTGCCAGCAGCACCAACTGGCC
                      ____________________________________________________________
consensus             TTCAACCAGACAAGGAGCCCGATTACTCAGAGCTTAACTTGCCAGCAGCACCAACTGGCC
 
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rJMSF016G14+          ATGCCCCAGTAGCAAATCAGGCGGAAGACGAACTGGGCTTACCTGCTGTCCCCCGGGCCT
rJMSF035L22+          ATGCCCCAGTAGCAAATCAGGCGGAAGACGAACTGGGCTTACCTGCTGTCCCCCGGGCCT
                      ____________________________________________________________
consensus             ATGCCCCAGTAGCAAATCAGGCGGAAGACGAACTGGGCTTACCTGCTGTCCCCCGGGCCT
 
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rJMSF016G14+          CACTTCGCGGTTAGCTACACTATGCACCACAGTAGTTGACTCCTTCATTTTTCCCTAATG
rJMSF035L22+          CACTTCGCGGTTAGCTACACTATGCACCACAGTAGTTGACTCCTTCATTTTTCCCTAATG
                      ____________________________________________________________
consensus             CACTTCGCGGTTAGCTACACTATGCACCACAGTAGTTGACTCCTTCATTTTTCCCTAATG
 
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rJMSF016G14+          TCAAATATTGGTTGGCAAATGCTTGACATAAAC                           
rJMSF035L22+          TCAAATATTGGTTGGCAAATGCTTGACATAAACCATACTGTGCAGTATACTCCCGAATTT
                      ____________________________________________________________
consensus             TCAAATATTGGTTGGCAAATGCTTGACATAAACCATACTGTGCAGTATACTCCCGAATTT