Contig 005747:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF035L07+                                                CCAGAAAANGAAGCAAAACAAAA
rJMSF035L07-                     ATCTATTTTAACAAGAAAATCTGTAACCAGAAAAAGAAGCAAAACAAAA
                      ____________________________________________________________
consensus                        ATCTATTTTAACAAGAAAATCTGTAACCAGAAAAAGAAGCAAAACAAAA
 
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JMSF035L07+           CTAAAGGCATTATCCAATCAATCTAAAGTGCCATGCTTGGCCTAGAAAATTCTCATCCCC
rJMSF035L07-          CTAAAGGCATTATCCAATCAATCTAAAGTGCCATGCTTGGCCTAGAAAATTCTCATCCCC
                      ____________________________________________________________
consensus             CTAAAGGCATTATCCAATCAATCTAAAGTGCCATGCTTGGCCTAGAAAATTCTCATCCCC
 
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JMSF035L07+           TGTTCTCGTATCCATCAATTATAATTCTTCTTTATCCTCGCCGCTTTCTGCTTTCCTTTC
rJMSF035L07-          TGTTCTCGTATCCATCAATTATAATTCTTCTTTATCCTCGCCGCTTTCTGCTTTCCTTTC
                      ____________________________________________________________
consensus             TGTTCTCGTATCCATCAATTATAATTCTTCTTTATCCTCGCCGCTTTCTGCTTTCCTTTC
 
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JMSF035L07+           TGCCTTTTCTGCTTCTTCTAATGCAAACAGTTTGAGTGACTCCACATCCCTTTGACCTTG
rJMSF035L07-          TGCCTTTTCTGCTTCTTCTAATGCAAACAGTTTGAGTGACTCCACATCCCTTTGACCTTG
                      ____________________________________________________________
consensus             TGCCTTTTCTGCTTCTTCTAATGCAAACAGTTTGAGTGACTCCACATCCCTTTGACCTTG
 
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JMSF035L07+           ATATTTGGCAACCTCTTCTCCATTGTAAAAGAGCTTGAATGTTGGATAAGAATGGATATC
rJMSF035L07-          ATATTTGGCAACCTCTTCTCCATTGTAAAAGAGCTTGAATGTTGGATAAGAATGGATATC
                      ____________________________________________________________
consensus             ATATTTGGCAACCTCTTCTCCATTGTAAAAGAGCTTGAATGTTGGATAAGAATGGATATC
 
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JMSF035L07+           AACCTTTTGACATACAGGTTTATTTGTGCCACAATCAACCTCTCCAATCTCTATCTCATC
rJMSF035L07-          AACCTTTTGACATACAGGTTTATTTGTGCCACAATCAACCTCTCCAATCTCTATCTCATC
                      ____________________________________________________________
consensus             AACCTTTTGACATACAGGTTTATTTGTGCCACAATCAACCTCTCCAATCTCTATCTCATC
 
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JMSF035L07+           CTCTCCTTCTGTTGCCTTTCCTACATCTTCCCATAATGTTCCCAAGTTTTTACAGTGCTT
rJMSF035L07-          CTCTCCTTCTGTTGCCTTTCCTACATCTTCCCATAATGTTCCCAAGTTTTTACAGTGCTT
                      ____________________________________________________________
consensus             CTCTCCTTCTGTTGCCTTTCCTACATCTTCCCATAATGTTCCCAAGTTTTTACAGTGCTT
 
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JMSF035L07+           GCACCAAGGAACACAAAATTTCACGAACCAAGCAGTATGCTTCTCATTTATCTTATCATT
rJMSF035L07-          GCACCAAGGAACACAAAATTTCACGAACCAAGCAGTATGCTTCTCATTTATCTTATCATT
                      ____________________________________________________________
consensus             GCACCAAGGAACACAAAATTTCACGAACCAAGCAGTATGCTTCTCATTTATCTTATCATT
 
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JMSF035L07+           GAAGGTTTCAGCTGTGAGCGTAATGACCTCAGCTTTGGTAATATGCATACAGCTGTAGAG
rJMSF035L07-          GAAGGTTTCAGCTGTGAGCGTAATGACCTCAGCTTTGGTAATATGCATACAGCTGTAGAG
                      ____________________________________________________________
consensus             GAAGGTTTCAGCTGTGAGCGTAATGACCTCAGCTTTGGTAATATGCATACAGCTGTAGAG
 
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JMSF035L07+           AAGAATTGAAGAAATCAAAAGAATGTAAAAAGATCTCATCACTGCTCTCTTCTATTGGTT
rJMSF035L07-          AAGAATTGAAGAAATCAAAAGAATGTAAAAAGATCTCATCACTGCTCTCTTCTATTGGTT
                      ____________________________________________________________
consensus             AAGAATTGAAGAAATCAAAAGAATGTAAAAAGATCTCATCACTGCTCTCTTCTATTGGTT
 
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JMSF035L07+           CTCAGAATTTCTTCGTTATAGTCTAAGCCGATTGGTGTTGCAGTATTACACGAATTGATG
rJMSF035L07-          CTCAGAATTTCTTCGTTATAGTCTAAGCCGATTGGTGTTGCAGTATTACACGAATTGATG
                      ____________________________________________________________
consensus             CTCAGAATTTCTTCGTTATAGTCTAAGCCGATTGGTGTTGCAGTATTACACGAATTGATG
 
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JMSF035L07+           AAGATGGAAGAGGGTGTTTGCGAAGAAAATCAGATCCCCCCAAAACCTCTGAATCCAGTC
rJMSF035L07-          AAGATGGAAGAGGGTGTTTGCGAAGAAAATCAGATCCCCCCAAANCCTCTGAATCCAGTC
                      ____________________________________________________________
consensus             AAGATGGAAGAGGGTGTTTGCGAAGAAAATCAGATCCCCCCAAAACCTCTGAATCCAGTC