Contig 005744:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF030J20Sequence640005744 (5)gb|KDO84262.1|2e-04hypothetical protein CISIN_1g021151mg [Citrus sinensis]766005744 (5)ref|XP_011074459.1|5e-97PREDICTED: LOW QUALITY PROTEIN: probable inactive heme oxygenase 2, chloroplast
JMSF035D12Sequence663005744 (5)emb|CDP01329.1|5e-13unnamed protein product [Coffea canephora]680005744 (5)ref|XP_011074459.1|3e-87PREDICTED: LOW QUALITY PROTEIN: probable inactive heme oxygenase 2, chloroplast
JMSF044H03Sequence803005744 (5)emb|CDP01329.1|6e-42unnamed protein product [Coffea canephora]751020510ref|XP_009617475.1|5e-18PREDICTED: thioredoxin-like protein CXXS1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF030J20- GCGGATTAGCAACAATGGCTTGCTACTCTTGTGCTGCGGT
JMSF035D12- GGATTAGCAACAATGGCTTGCTACTCTTGTGCTGCGGT
JMSF044H03+ AACAATGGCTTGCTACTCTTGTGCTGCGGT
                      ____________________________________________________________
consensus GCGGATTAGCAACAATGGCTTGCTACTCTTGTGCTGCGGT
 
. : . : . : . : . : . :
JMSF030J20- AATAGGAGCAAACCCCACGCCGATAAAATCTTCAAATTTCCAAA-TTTTCACTCCCAACG
JMSF035D12- AATAGGAGCAAACCCCACGCCGATAAAATCTTCAAATTTCCAAA-TTTTCACTCCCAACG
JMSF044H03+ AATAGGAGCAAACCCCACGCCGATAAAATCTTCAAATTTCCAAATTTTTCACTCCCAACG
                      ____________________________________________________________
consensus AATAGGAGCAAACCCCACGCCGATAAAATCTTCAAATTTCCAAA-TTTTCACTCCCAACG
 
. : . : . : . : . : . :
JMSF030J20- ATAGTCTTTCACTCCCAATTATCCCAACTATCAAGAAAATAATTCTCAGAACCAACAGAC
JMSF035D12- ATAGTCTTTCACTCCCAATTATCCCAACTATCAAGAAAATAATTCTCAGAACCAACAGAC
JMSF044H03+ ATAGTCTTTCACTCCCAATTATCCCAACTATCAAGAAAATAATTCTCAGAACCAACAGAC
                      ____________________________________________________________
consensus ATAGTCTTTCACTCCCAATTATCCCAACTATCAAGAAAATAATTCTCAGAACCAACAGAC
 
. : . : . : . : . : . :
JMSF030J20- CCCTTTCAGTCCTCCATTGTTCAAGCTCCAACTTTTCCTCAGCAACACTTTCACAGTCAG
JMSF035D12- CCCTTTCAGTCCTCCATTGTTCAAGCTCCAACTTTTCCTCAGCAACACTTTCACAGTCAG
JMSF044H03+ CCCTTTCAGTCCTCCATTGTTCAAGCTCCAACTTTTCCTCAGCAACACTTTCACAGTCAG
                      ____________________________________________________________
consensus CCCTTTCAGTCCTCCATTGTTCAAGCTCCAACTTTTCCTCAGCAACACTTTCACAGTCAG
 
. : . : . : . : . : . :
JMSF030J20- AAACCGAAGACGATGAGTACAGCGGTGAAGAAGAAGAAGAAGAAGAAGACGACGAAAGCG
JMSF035D12- AAACCGAAGACGATGAGTACAGCGGTGAAGAAGAAGAAGAAGAAGAAGACGACGAAAGCG
JMSF044H03+ AAACCGAAGACGATGAGTACAGCGGTGAAGAAGAAGAAGAAGAAGAAGACGACGAAAGCG
                      ____________________________________________________________
consensus AAACCGAAGACGATGAGTACAGCGGTGAAGAAGAAGAAGAAGAAGAAGACGACGAAAGCG
 
. : . : . : . : . : . :
JMSF030J20- GAAATGGGTCGGCGTCATTTTCTGCGGCGGCGGCGGCGACGGGGAGTTTGCCGCCGTTGA
JMSF035D12- GAAATGGGTCGGCGTCATTTTCTGCGGCGGCGGCGGCGACGGGGAGTTTGCCGCCGTTGA
JMSF044H03+ GAAATGGGTCGGCGTCATTTTCTGCGGCGGCGGCGGCGACGGGGAGTTTGCCGCCGTTGA
                      ____________________________________________________________
consensus GAAATGGGTCGGCGTCATTTTCTGCGGCGGCGGCGGCGACGGGGAGTTTGCCGCCGTTGA
 
. : . : . : . : . : . :
JMSF030J20- AACAGAAAAGAAGGAGGTACAGAAAGCAATACCCTGGCGAGATCAAGGGTATCACTGAAG
JMSF035D12- AACAGAAAAGAAGGAGGTACAGAAAGCAATACCCTGGCGAGATCAAGGGTATCACTGAAG
JMSF044H03+ AACAGAAAAGAAGGAGGTACAGAAAGCAATACCCTGGCGAGATCAAGGGTATCACTGAAG
                      ____________________________________________________________
consensus AACAGAAAAGAAGGAGGTACAGAAAGCAATACCCTGGCGAGATCAAGGGTATCACTGAAG
 
. : . : . : . : . : . :
JMSF030J20- AGATGAGGTTTGTGACGATGAAACTCCGCAACAGCGGCAAACCGTCAAAGAGTAAGCCGA
JMSF035D12- AGATGAGGTTTGTGACGATGAAACTCCGCAACAGCGGCAAACCGTCAAAGAGTAAGCCGA
JMSF044H03+ AGATGAGGTTTGTGACGATGAAACTCCGCAACAGCGGCAAACCGTCAAAGAGTAAGCCGA
                      ____________________________________________________________
consensus AGATGAGGTTTGTGACGATGAAACTCCGCAACAGCGGCAAACCGTCAAAGAGTAAGCCGA
 
. : . : . : . : . : . :
JMSF030J20- TAGGTGAGAGTGACAAAGAAGAATCGGAAGAGAGTGGCAGTGAAGAAGCAATGGAGGAAG
JMSF035D12- TAGGTGAGAGTGACAAAGAAGAATCGGAAGAGAGTGGCAGTGAAGAAGCAATGGAGGAAG
JMSF044H03+ TAGGTGAGAGTGACAAAGAAGAATCGGAAGAGAGTGGCAGTGAAGAAGCAATGGAGGAAG
rJMSF030J20+ GAGGAAG
                      ____________________________________________________________
consensus TAGGTGAGAGTGACAAAGAAGAATCGGAAGAGAGTGGCAGTGAAGAAGCAATGGAGGAAG
 
. : . : . : . : . : . :
JMSF030J20- GTGAGGTCAGTGACAGTGAAGGGTCGGTTTCAGTGGATGAAGATGATGAGGATGGAAATG
JMSF035D12- GTGAGGTCAGTGACAGTGAAGGGTCGGTTTCAGTGGATGAAGATGATGAGGATGGAAATG
JMSF044H03+ GTGAGGTCAGTGACAGTGAAGGGTCGGTTTCAGTGGATGAAGATGATGAGGATGGAAATG
rJMSF030J20+ GTGAGGTCAGTGACAGTGAAGGGTCGGTTTCAGTGGATGAAGATGATGAGGATGGAAATG
                      ____________________________________________________________
consensus GTGAGGTCAGTGACAGTGAAGGGTCGGTTTCAGTGGATGAAGATGATGAGGATGGAAATG
 
. : . : . : . : . : . :
JMSF030J20- GAAAGTCTTGGCAGCCTAGTACGGAAGGATTCTTGAAGTACCTTGTGGATACTAAGCTTG
JMSF035D12- GAAAGTCTTGGCAGCCTAGTACGGAAGGATTCTTGAAGTACCTTGTGGATACTAAGCTTG
JMSF044H03+ GAAAGTCTTGGCAGCCTAGTACGGAAGGATTCTTGAAGTACCTTGTGGATACTAAGCTTG
rJMSF030J20+ GAAAGTCTTGGCAGCCTAGTACGGAAGGATTCTTGAAGTACCTTGTGGATACTAAGCTTG
rJMSF035D12+ CCTTGTGGATACTAAGCTTG
                      ____________________________________________________________
consensus GAAAGTCTTGGCAGCCTAGTACGGAAGGATTCTTGAAGTACCTTGTGGATACTAAGCTTG
 
. : . : . : . : . : . :
JMSF030J20- T
JMSF035D12- TGTTCGGCACAATTGAACGCATTG
JMSF044H03+ TGTTCGGCACAATTGAACGCATTGTTGATGAATCCAGCGATGTTTCTTATGCTTACTTCA
rJMSF030J20+ TGTTCGGCACAATTGAACGCATTGTTGATGAATCCAGCGATGTTTCTTATGCTTACTTCA
rJMSF035D12+ TGTTCGGCACAATTGAACGCATTGTTGATGAATCCAGCGATGTTTCTTATGCTTACTTCA
                      ____________________________________________________________
consensus TGTTCGGCACAATTGAACGCATTGTTGATGAATCCAGCGATGTTTCTTATGCTTACTTCA
 
. : . : . : . : . : . :
JMSF044H03+ GAAAGACGGGATTAGAACGAGCAGATTGCATTTCCAAAGATTTAGAATGGTTTAGCCAAC
rJMSF030J20+ GAAAGACGGGATTAGAACGAGCAGATTGCATTTCCAAAGATTTAGAATGGTTTAGCCAAC
rJMSF035D12+ GAAAGACGGGATTAGAACGAGCAGATTGCATTTCCAAAGATTTAGAATGGTTTAGCCAAC
                      ____________________________________________________________
consensus GAAAGACGGGATTAGAACGAGCAGATTGCATTTCCAAAGATTTAGAATGGTTTAGCCAAC
 
. : . : . : . : . : . :
JMSF044H03+ AGGGTAATGTTATTCCAGAACCTAGCAGTCCTGGTGTTGATTACTCTAAGTAT
rJMSF030J20+ AGGGTAATGTTATTCCAGAACCTAGCAGTCCTGGTGTTGATTACTCTAAGTATCTCGAGG
rJMSF035D12+ AGGGTAATGTTATTCCAGAACCTAGCAGTCCTGGTGTTGATTACTCTAAGTATCTCGAGG
                      ____________________________________________________________
consensus AGGGTAATGTTATTCCAGAACCTAGCAGTCCTGGTGTTGATTACTCTAAGTATCTCGAGG
 
. : . : . : . : . : . :
rJMSF030J20+ AGCTCGCGGAGACTAATCCCCCATTGTTTCTCTGCCACTTCTACAACATATACTTCTCCC
rJMSF035D12+ AGCTCGCGGAGACTAATCCCCCATTGTTTCTCTGCCACTTCTACAACATATACTTCTCCC
                      ____________________________________________________________
consensus AGCTCGCGGAGACTAATCCCCCATTGTTTCTCTGCCACTTCTACAACATATACTTCTCCC
 
. : . : . : . : . : . :
rJMSF030J20+ ATATAGCTGGAGGTCAAGTTATAGCTAAAAAGGTTTCTGAAAAGCTCTTAGAGGGAAGAG
rJMSF035D12+ ATATAGCTGGAGGTCAAGTTATAGCTAAAAAGGTTTCTGAAAAGCTCTTAGAAGGAAGAG
                      ____________________________________________________________
consensus ATATAGCTGGAGGTCAAGTTATAGCTAAAAAGGTTTCTGAAAAGCTCTTAGAGGGAAGAG
 
. : . : . : . : . : . :
rJMSF030J20+ TATTGGAGGTCTACACGTGGGAAGGAGACCCCGAGAAGCAGCTGCAGGGTGTAAGGGAGA
rJMSF035D12+ TATTGGAGGTCTACACGTGGGAAGGAGACCCCGAGAAGCAGCTGCAGGGTGTAAGGGAGA
                      ____________________________________________________________
consensus TATTGGAGGTCTACACGTGGGAAGGAGACCCCGAGAAGCAGCTGCAGGGTGTAAGGGAGA
 
. : . : . : . : . : . :
rJMSF030J20+ AGCTCAACATGCTCAGTGAGCACTGGTCTAGAAAGGAGAAAAACAAATGTTTGCGGGATA
rJMSF035D12+ AGCTCAACATGCTCAGTGAGCACTGGTCTAGAAAGGAGAAAAACAAATGTTTGCGGGATA
                      ____________________________________________________________
consensus AGCTCAACATGCTCAGTGAGCACTGGTCTAGAAAGGAGAAAAACAAATGTTTGCGGGATA
 
. : . : . : . : . : . :
rJMSF030J20+ TACCCAAGGCATTCCGGTTTATGGGGCAGATAGTCCGGTTAATCGTCTTCCTGTAAAACG
rJMSF035D12+ TACCCAAGGCATTCCGGTTTATGGGGCAGATAGTCCGGTTAATCGTCTTCCTGTAAAACG
                      ____________________________________________________________
consensus TACCCAAGGCATTCCGGTTTATGGGGCAGATAGTCCGGTTAATCGTCTTCCTGTAAAACG
 
. : . : . : . : . : . :
rJMSF030J20+ GGCAGTTCCAGCCCGAAGAGTGCACTTATAGCTTTGGATG
rJMSF035D12+ GGCAGTTCCAGCCCGAAGAGTGCACTTATAGCTTTGGATGACATGGCGCAATGAAACATA
                      ____________________________________________________________
consensus GGCAGTTCCAGCCCGAAGAGTGCACTTATAGCTTTGGATGACATGGCGCAATGAAACATA
 
. : . : . : . : . : . :
rJMSF035D12+ GCCCAGAATGGACTATGTGGTCTAATGGTACCCGGGTTGGACTTCTATTTGGAAGATTAT
                      ____________________________________________________________
consensus GCCCAGAATGGACTATGTGGTCTAATGGTACCCGGGTTGGACTTCTATTTGGAAGATTAT
 
. : . : . : . : . : . :
rJMSF035D12+ AAGTTCGAGCCTCAATGGAGGCGTTATTGGTTCTTTGTGTTTCAGTAGGTTGAGAAAGTA
                      ____________________________________________________________
consensus AAGTTCGAGCCTCAATGGAGGCGTTATTGGTTCTTTGTGTTTCAGTAGGTTGAGAAAGTA