| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF001H13 | Sequence | 428 | 009156 (5) | ref|XP_011101012.1| | 1e-09 | PREDICTED: protein tipD-like [Sesamum indicum] | 727 | 005741 (5) | ref|XP_009621460.1| | 230 | PREDICTED: uncharacterized protein LOC104113074 [Nicotiana tomentosiformis] |
| JMSF013E16 | Sequence | 451 | 009156 (5) | ref|XP_011101012.1| | 2e-10 | PREDICTED: protein tipD-like [Sesamum indicum] | 756 | 005741 (5) | ref|XP_009621460.1| | 248 | PREDICTED: uncharacterized protein LOC104113074 [Nicotiana tomentosiformis] |
| JMSF032P23 | Sequence | 661 | 009156 (5) | ref|XP_009770473.1| | 145 | PREDICTED: WD repeat-containing protein 44-like [Nicotiana sylvestris] ref|XP_00 | 575 | 005741 (5) | ref|XP_009621460.1| | 155 | PREDICTED: uncharacterized protein LOC104113074 [Nicotiana tomentosiformis] |
| JMSF033J17 | Sequence | 617 | 009156 (5) | ref|XP_009770473.1| | 131 | PREDICTED: WD repeat-containing protein 44-like [Nicotiana sylvestris] ref|XP_00 | 658 | 005741 (5) | ref|XP_009621460.1| | 167 | PREDICTED: uncharacterized protein LOC104113074 [Nicotiana tomentosiformis] |
| JMSF034D23 | Sequence | 529 | 009156 (5) | ref|XP_011101012.1| | 4e-16 | PREDICTED: protein tipD-like [Sesamum indicum] | 618 | 005741 (5) | ref|XP_009621460.1| | 168 | PREDICTED: uncharacterized protein LOC104113074 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF001H13+ TTCCTCACAATAG
rJMSF013E16+ TCGAGTATGCCTGCAAGGGAAGAAAAAGCTTCCTCACAATAG
____________________________________________________________
consensus TCGAGTATGCCTGCAAGGGAAGAAAAAGCTTCCTCACAATAG
. : . : . : . : . : . :
rJMSF001H13+ AATAGTCGGATTTCAGTTCTGCCCAGATGACACAAGCAAAGTTATGGTTACTTCAGCTGA
rJMSF013E16+ AATAGTCGGATTTCAGTTCTGCCCAGATGACACAAGCAAAGTTATGGTTACTTCAGCTGA
____________________________________________________________
consensus AATAGTCGGATTTCAGTTCTGCCCAGATGACACAAGCAAAGTTATGGTTACTTCAGCTGA
. : . : . : . : . : . :
rJMSF001H13+ TTCGCAGATTAGAATACTTAACGGCTCCAATATCATCTGCAAATTCAAAGGGGTCCGAAA
rJMSF033J17+ AGGGGTCCGAAA
rJMSF013E16+ TTCGCAGATTAGAATACTTAACGGCTCCAATATCATCTGCAAATTCAAAGGGGTCCGAAA
rJMSF034D23+ TCCGAAA
____________________________________________________________
consensus TTCGCAGATTAGAATACTTAACGGCTCCAATATCATCTGCAAATTCAAAGGGGTCCGAAA
. : . : . : . : . : . :
rJMSF001H13+ TTCTGCAGGCCTGGTTCCTGCAACGTTTACATCGGATGGAAAGCACGTTGTCTCGGTTAC
rJMSF033J17+ TTCTGCAGGCCTGGTTCCTGCAACGTTTACATCGGATGAAAAGCACGTTGTCTCGGTTAC
rJMSF032P23+ GCAACGTTTACATCGGATGAAAAGCACGTTGTCTCGGTTAC
rJMSF013E16+ TTCTGCAGGCCTGGTTCCTGCAACGTTTACATCGGATGGAAAGCACGTTGTCTCGGTTAC
rJMSF034D23+ TTCTGCAGGCCTGGTTCCTGCAACGTTTACATCGGATGGAAAGCACGTTGTCTCGGTTAC
____________________________________________________________
consensus TTCTGCAGGCCTGGTTCCTGCAACGTTTACATCGGATGGAAAGCACGTTGTCTCGGTTAC
. : . : . : . : . : . :
rJMSF001H13+ TGAAGATTCGAATGTGTGTATCTGGAACTATAACGAGCTGCAGACTAGTAAGACCGTACG
rJMSF033J17+ TGAAGATTCGAATGTGTGTATCTGGAACTATAACGAGCTGCAGACTAGTAAGACCGTACG
rJMSF032P23+ TGAAGATTCGAATGTGTGTATCTGGAACTATAACGAGCTGCAGACTAGTAAGACCGTACG
rJMSF013E16+ TGAAGATTCGAATGTGTGTATCTGGAACTATAACGAGCTGCAGACTAGTAAGACCGTACG
rJMSF034D23+ TGAAGATTCGAATGTGTGTATCTGGAACTATAACGAGCTGCAGACTAGTAAGACCGTACG
____________________________________________________________
consensus TGAAGATTCGAATGTGTGTATCTGGAACTATAACGAGCTGCAGACTAGTAAGACCGTACG
. : . : . : . : . : . :
rJMSF001H13+ ATCCTATGAAAGTTTCTATTCCCACAACGCATCAGTGGTGGTACCTTGGTGTGGTGCAGG
rJMSF033J17+ ATCCTATGAAAGTTTCTATTCCCACAACGCATCAGTGGTGGTACCTTGGTGTGGTGCAGG
rJMSF032P23+ ATCCTATGAAAGTTTCTATTCCCACAACGCATCAGTGGTGGTACCTTGGTGTGGTGCAGG
rJMSF013E16+ ATCCTATGAAAGTTTCTATTCCCACAACGCATCAGTGGTGGTACCTTGGTGTGGTGCAGG
rJMSF034D23+ ATCCTATGAAAGTTTCTATTCCCACAACGCATCAGTGGTGGTACCTTGGTGTGGTGCAGG
____________________________________________________________
consensus ATCCTATGAAAGTTTCTATTCCCACAACGCATCAGTGGTGGTACCTTGGTGTGGTGCAGG
. : . : . : . : . : . :
rJMSF001H13+ ATCATCGGTGCCAGGAAGCATGTTATCGAGCGGGAAGGCGATATCAACCTCATCGTCATC
rJMSF033J17+ ATCATCGGTGCCAGGAAGCATGTTATCGAGCGGGAAGGCGATATCAACCTCATCGTCATC
rJMSF032P23+ ATCATCGGTGCCAGGAAGCATGTTATCGAGCGGGAAGGCGATATCAACCTCATCGTCATC
rJMSF013E16+ ATCATCGGTGCCAGGAAGCATGTTATCGAGCGGGAAGGCGATATCAACCTCATCGTCATC
rJMSF034D23+ ATCATCGGTGCCAGGAAGCATGTTATCGAGCGGGAAGGCGATATCAACCTCATCGTCATC
____________________________________________________________
consensus ATCATCGGTGCCAGGAAGCATGTTATCGAGCGGGAAGGCGATATCAACCTCATCGTCATC
. : . : . : . : . : . :
rJMSF001H13+ GTGTTGTCAGTTCAAGGGATGTGCAACGTGGCCGGAGGAGAAACTCCCTAATTTGAGCCC
rJMSF033J17+ GTGTTGTCAGTTCAAGGGATGTGCAACGTGGCCGGAGGAGAAACTCCCTAATTTGAGCCC
rJMSF032P23+ GTGTTGTCAGTTCAAGGGATGTGCAACGTGGCCGGAGGAGAAACTCCCTAATTTGAGCCC
rJMSF013E16+ GTGTTGTCAGTTCAAGGGATGTGCAACGTGGCCGGAGGAGAAACTCCCTAATTTGAGCCC
rJMSF034D23+ GTGTTGTCAGTTCAAGGGATGTGCAACGTGGCCGGAGGAGAAACTCCCTAATTTGAGCCC
____________________________________________________________
consensus GTGTTGTCAGTTCAAGGGATGTGCAACGTGGCCGGAGGAGAAACTCCCTAATTTGAGCCC
. : . : . : . : . : . :
rJMSF001H13+ ATCCCCAGTATTGAAATCGGATTACAAGTTTCTGAAGAGTGCGTGGCAAAGCGCATTGGC
rJMSF033J17+ ATCCCCAGTATTGAAATCGGATTACAAGTTTCTGAAGAGTGCGTGGCAAAGCGCATTGGC
rJMSF032P23+ ATCCCCAGTATTGAAATCGGATTACAAGTTTCTGAAGAGTGCGTGGCAAAGCGCATTGGC
rJMSF013E16+ ATCCCCAGTATTGAAATCGGATTACAAGTTTCTGAAGAGTGCGTGGCAAAGCGCATTGGC
rJMSF034D23+ ATCCCCAGTATTGAAATCGGATTACAAGTTTCTGAAGAGTGCGTGGCAAAGCGCATTGGC
____________________________________________________________
consensus ATCCCCAGTATTGAAATCGGATTACAAGTTTCTGAAGAGTGCGTGGCAAAGCGCATTGGC
. : . : . : . : . : . :
rJMSF001H13+ TTCTTCTCCAAATTTATGGGGTCTCGTGGTTGTGACTGCCGGGTTGGATGGATACATCAG
rJMSF033J17+ TTCTTCTCCAAATTTATGGGGTCTCGTGGTTGTGACTGCCGGGTTGGATGGATACATCAG
rJMSF032P23+ TTCTTCTCCAAATTTATGGGGTCTCGTGGTTGTGACTGCCGGGTTGGATGGATACATCAG
rJMSF013E16+ TTCTTCTCCAAATTTATGGGGTCTCGTGGTTGTGACTGCCGGGTTGGATGGATACATCAG
rJMSF034D23+ TTCTTCTCCAAATTTATGGGGTCTCGTGGTTGTGACTGCCGGGTTGGATGGATACATCAG
____________________________________________________________
consensus TTCTTCTCCAAATTTATGGGGTCTCGTGGTTGTGACTGCCGGGTTGGATGGATACATCAG
. : . : . : . : . : . :
rJMSF001H13+ AACATTCCTTAACTACGGTTTACCAATTCGTTTTTGATTGAGATCATAACATTATTTTTA
rJMSF033J17+ AACATTCCTTAACTACGGTTTACCAATTCGTTTTTGATTGAGATCATAACATTATTTTTA
rJMSF032P23+ AACATTCCTTAACTACGGTTTACCAATTCGTTTTTGATTGAGATCATAACATTATTTTTA
rJMSF013E16+ AACATTCCTTAACTACGGTTTACCAATTCGTTTTTGATTGAGATCATAACATTATTTTTA
rJMSF034D23+ AACATTCCTTAACTACGGTTTACCAATTCGTTTTTGATTGAGATCATAACATTATTTTTA
____________________________________________________________
consensus AACATTCCTTAACTACGGTTTACCAATTCGTTTTTGATTGAGATCATAACATTATTTTTA
. : . : . : . : . : . :
rJMSF001H13+ TTCATTTAGCAGCCAAGGGGCATCCTCCATCTCAGATTCATCAGCATAGAGAATGTTATG
rJMSF033J17+ TTCATTTAGCAGCCAAGGGGCATCCTCCATCTCAGATTCATCAGCATAGAGAATGTTATG
rJMSF032P23+ TTCATTTAGCAGCCAAGGGGCATCCTCCATCTCAGATTCATCAGCATAGAGAATGTTATG
rJMSF013E16+ TTCATTTAGCAGCCAAGGGGCATCCTCCATCTCAGATTCATCAGCATAGAGAATGTTATG
rJMSF034D23+ TTCATTTAGCAGCCAAGGGGCATCCTCCATCTCAGATTCATCAGCATAGAGAATGTTATG
____________________________________________________________
consensus TTCATTTAGCAGCCAAGGGGCATCCTCCATCTCAGATTCATCAGCATAGAGAATGTTATG
. : . : . : . : . : . :
rJMSF001H13+ ATTTGTTGTTGTATATGATATTGAATTCTGTAAGTTCCAGCTGAAAGAACACCT
rJMSF033J17+ ATTTGTTGTTGTATATGATATTGAATTCTGTAAGTTCCAGCTGAAAGAACACCT
rJMSF032P23+ ATTTGTTGTTGTATATGATATTGAATTCTGTAAGTTCCAGCTGAAAGAACACCT
rJMSF013E16+ ATTTGTTGTTGTATATGATATTGAATTCTGTAAGTTCCAGCTGAAAGAACACCT
rJMSF034D23+ ATTTGTTGTTGTATATGATATTGAATTCTGTAAGTTCCAGCTGAAAGAACACCTATAATT
____________________________________________________________
consensus ATTTGTTGTTGTATATGATATTGAATTCTGTAAGTTCCAGCTGAAAGAACACCTATAATT