Contig 005737:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF012K20+                CTGTCGTGGATGATTTNGGTGTTCATTTCAGACAAGGCTTACACAAGAAAAGAA
rJMSF033I04+                                                          ACAAGAAAAGNA
                      ____________________________________________________________
consensus                   CTGTCGTGGATGATTTNGGTGTTCATTTCAGACAAGGCTTACACAAGAAAAGAA
 
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rJMSF012K20+          GTGCTAGAAATGGAGAGTTTGATGCTGAACACGTTGCAGTTCAACATGTCAGTCCCAACT
rJMSF033I04+          GTGCTAGAAATGGAGAGTTTGATGCTGAACACGTTGCAGTTCAACATGTCAGTCCCAACT
                      ____________________________________________________________
consensus             GTGCTAGAAATGGAGAGTTTGATGCTGAACACGTTGCAGTTCAACATGTCAGTCCCAACT
 
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rJMSF012K20+          CCATATGTGTTCATGAAGAGGTTCCTCAAGGCGGCTCAATCCGACAAGAAGCTGGAGCTC
rJMSF033I04+          CCATATGTGTTCATGAAGAGGTTCNTCAAGNCGGCTCAATCCGACAAGAAGCTGGAGCTC
                      ____________________________________________________________
consensus             CCATATGTGTTCATGAAGAGGTTCCTCAAGGCGGCTCAATCCGACAAGAAGCTGGAGCTC
 
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rJMSF012K20+          ATGTCC-TTCTTCTTGATCGAGCTTTGCCTGGTGGAGTACGAGATGCTCAAGTTCCCGCC
rJMSF033I04+          ATGTCCTTTCTTNTTGATCGAGCTTTGCCTGGTGGAGTACGAGATGCTCAAGTTNCCGCC
                      ____________________________________________________________
consensus             ATGTCCTTTCTTCTTGATCGAGCTTTGCCTGGTGGAGTACGAGATGCTCAAGTTCCCGCC
 
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rJMSF012K20+          GTCCTTTCTGGCGGCGGCCGCCATCTACTCCGCCCAGTGCTCGCTCTACGGCGTTAGCCA
rJMSF033I04+          GTCCTTTCTGGCGGCGGCCGCCATCTNCTCCGCCCAGTGCTCGCTNTACGGCGTTAGCCA
                      ____________________________________________________________
consensus             GTCCTTTCTGGCGGCGGCCGCCATCTACTCCGCCCAGTGCTCGCTCTACGGCGTTAGCCA
 
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rJMSF012K20+          ATGGAGCAAGACCTGCGAGTGGCACACTGGCTACACAGAACACCAACTTCTAGAAAGCTC
rJMSF033I04+          ATGGAGCAAGACCTGCGAGTGGCACACNGGNTACACAGAACACCAACTTCTAGAAAGCTC
                      ____________________________________________________________
consensus             ATGGAGCAAGACCTGCGAGTGGCACACTGGCTACACAGAACACCAACTTCTAGAAAGCTC
 
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rJMSF012K20+          GAGAAAGATGGTGGGGTTCCACCAGAATGCCGCAACGGGGAAACTTACAGGAGTACATAG
rJMSF033I04+          GAGAAAGATGGTGGGGTTCCACCAGAATGCCGCAACGGGGAAACTTACAGGAGTACATAG
                      ____________________________________________________________
consensus             GAGAAAGATGGTGGGGTTCCACCAGAATGCCGCAACGGGGAAACTTACAGGAGTACATAG
 
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rJMSF012K20+          GAAGTACAACACATCAAAATATGGGTATGCTGCAAAATGTGAAGCAGCCAGTTTTCTTCT
rJMSF033I04+          GAAGTACAACACATCAAAATATGGGTNTGCTGCAAAATGTGAAGCAGCCAGTTTTCTTCT
                      ____________________________________________________________
consensus             GAAGTACAACACATCAAAATATGGGTATGCTGCAAAATGTGAAGCAGCCAGTTTTCTTCT
 
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rJMSF012K20+          TGTACAGACCCAATAACAGACAGGGAGATTCAGGGGGGGCATGTACAGTGCACTCTAACT
rJMSF033I04+          TGTACAGNCCCAATAACAGACAGGGAGATTCAGGGGGGGCATGTACAGTGCACTCTAACT
                      ____________________________________________________________
consensus             TGTACAGACCCAATAACAGACAGGGAGATTCAGGGGGGGCATGTACAGTGCACTCTAACT
 
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rJMSF012K20+          ATACATGACTTTCTATAATTGGGGGATACAGCTTTCTGGGGTAATGCATGCTAATTTACA
rJMSF033I04+          ATACATGACTTTCTATAATTGGGGGATACAGCTTTCTGGGGTAATGCATGCTAATTTACA
                      ____________________________________________________________
consensus             ATACATGACTTTCTATAATTGGGGGATACAGCTTTCTGGGGTAATGCATGCTAATTTACA
 
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rJMSF012K20+          AGAATAATTTGTTAGCAACTATCTGTTGCCCCGGGGGAGGGGGGATTTGATCATCTGATT
rJMSF033I04+          AGAATAATTTGTTAGCAACTATCTGTTGCCCCGGGGGAGGGGGGATTTGATCATCTGATT
                      ____________________________________________________________
consensus             AGAATAATTTGTTAGCAACTATCTGTTGCCCCGGGGGAGGGGGGATTTGATCATCTGATT
 
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rJMSF012K20+          TTTATTGTTAGAAGAAGAGAGGGAGGGGGTTGTGTTGTTTGCAATTGCAAAACAACCATG
rJMSF033I04+          TTTATTGTTAGAAGAAGAGAGGGAGGGGGTTGTGTTGTTTGCAATTGCAAAACAACCATG
                      ____________________________________________________________
consensus             TTTATTGTTAGAAGAAGAGAGGGAGGGGGTTGTGTTGTTTGCAATTGCAAAACAACCATG
 
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rJMSF012K20+          ATCATTTTCATTTGTTATTTGGAACAGATCTCTTTATTGTATTTCTGCATAT        
rJMSF033I04+          ATCATTTTCATTNGTTATTTGGAACAGATCTCTTTATTGNATTTCTGCATATTTTCTTCT
                      ____________________________________________________________
consensus             ATCATTTTCATTTGTTATTTGGAACAGATCTCTTTATTGTATTTCTGCATATTTTCTTCT