Contig 005733:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040J06Sequence506002328 (4)emb|CDP14880.1|6e-71unnamed protein product [Coffea canephora]725005733 (4)ref|XP_009626986.1|3e-71PREDICTED: protein NRT1/ PTR FAMILY 2.11-like [Nicotiana tomentosiformis]
JMFS018H02Sequence588005733 (4)ref|XP_009799219.1|1e-59PREDICTED: protein NRT1/ PTR FAMILY 2.11-like [Nicotiana sylvestris]
JMSF032J19Sequence673002328 (4)emb|CDP14880.1|4e-92unnamed protein product [Coffea canephora]744005733 (4)ref|XP_009626986.1|2e-72PREDICTED: protein NRT1/ PTR FAMILY 2.11-like [Nicotiana tomentosiformis]
JMSF033H01Sequence705002328 (4)emb|CDP14880.1|3e-112unnamed protein product [Coffea canephora]722005733 (4)ref|XP_009626986.1|2e-72PREDICTED: protein NRT1/ PTR FAMILY 2.11-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF033H01+ GGAGGAGCGCCGCCGCAGCGTCG
rJMFF040J06+ TGGAGGAGCGCCGCCGCAGCGTCG
rJMSF032J19+ GGAGGAGCGCCGCCGCAGCGTCG
                      ____________________________________________________________
consensus TGGAGGAGCGCCGCCGCAGCGTCG
 
. : . : . : . : . : . :
rJMSF033H01+ CGCTCAGCAGGCCGATGCCCGGGGTGACGTCGAAAGGCGCCGCCATTTCTTCCATGTCGG
rJMFF040J06+ CGCTCAGCAGGCCGATGCCCGGGGTGACGTCGAAAGGCGCCGCCATTTCTTCCATGTCGG
rJMSF032J19+ CGCTCAGCAGGCCGATGCCCGGGGTGACGTCGAAAGGCGCCGCCATTTCTTCCATGTCGG
                      ____________________________________________________________
consensus CGCTCAGCAGGCCGATGCCCGGGGTGACGTCGAAAGGCGCCGCCATTTCTTCCATGTCGG
 
. : . : . : . : . : . :
rJMSF033H01+ CGCTGTGGTTGGTCCCCCAGCTCTCCCTGGCGGGGCTGGCGGAGGCGTTCACGGCCATCG
rJMFF040J06+ CGCTGTGGTTGGTCCCCCAGCTCTCCCTGGCGGGGCTGGCGGAGGCGTTCACGGCCATCG
JMFS018H02+ TGGTCCCCCAGCTCTCCCTGGCGGGGCTGGCGGAGGCGTTCACGGCCATCG
rJMSF032J19+ CGCTGTGGTTGGTCCCCCAGCTCTCCCTGGCGGGGCTGGCGGAGGCGTTCACGGCCATCG
                      ____________________________________________________________
consensus CGCTGTGGTTGGTCCCCCAGCTCTCCCTGGCGGGGCTGGCGGAGGCGTTCACGGCCATCG
 
. : . : . : . : . : . :
rJMSF033H01+ GACAGGTGGAGTTTTACTACAAGCAGTTCCCGGAGAACATGAGAAGCGTCGCCGGGTCCT
rJMFF040J06+ GACAGGTGGAGTTTTACTACAAGCAGTTCCCGGAGAACATGAGAAGCGTCGCCGGGTCCT
JMFS018H02+ GACAGGTGGAGTTTTACTACAAGCAGTTCCCGGAGAACATGAGAAGCGTCGCCGGGTCCT
rJMSF032J19+ GACAGGTGGAGTTTTACTACAAGCAGTTCCCGGAGAACATGAGAAGCGTCGCCGGGTCCT
                      ____________________________________________________________
consensus GACAGGTGGAGTTTTACTACAAGCAGTTCCCGGAGAACATGAGAAGCGTCGCCGGGTCCT
 
. : . : . : . : . : . :
rJMSF033H01+ TTTTCTTCTTGGGGATGGGGGCCTCCAGCTATCTCAACAGCTTCTTGATCTCCATTGTAC
rJMFF040J06+ TTTTCTTCTTGGGGATGGGGGCCTCCAGCTATCTCAACAGCTTCTTGATCTCCATTGTAC
JMFS018H02+ TTTTCTTCTTGGGGATTGGGGCCTCCAGCTATCTCAACAGCTTCTTGATCTCCATTGTAC
rJMSF032J19+ TTTTCTTCTTGGGGATGGGGGCCTCCAGCTATCTCAACAGCTTCTTGATCTCCATTGTAC
                      ____________________________________________________________
consensus TTTTCTTCTTGGGGATGGGGGCCTCCAGCTATCTCAACAGCTTCTTGATCTCCATTGTAC
 
. : . : . : . : . : . :
rJMSF033H01+ ATAGAACCACAGAAAACGCCAAAACTGGAAACTGGTTGCCGGAAGATCTCAACAAGGGAA
rJMFF040J06+ ATAGAACCACAGAAAACGCCAAAACTGGAAACTGGTTGCGGGAAGATCTCAACAAGGGAA
JMFS018H02+ ATAGAACCACAGAAAACGCCAAAACTGGAAACTGGTTGCCGGAAGATCTCAACAAGGGAA
rJMSF032J19+ ATAGAACCACAGAAAACGCCAAAACTGGAAACTGGTTGCCGGAAGATCTCAACAAGGGAA
                      ____________________________________________________________
consensus ATAGAACCACAGAAAACGCCAAAACTGGAAACTGGTTGCCGGAAGATCTCAACAAGGGAA
 
. : . : . : . : . : . :
rJMSF033H01+ GATTAGACTACTTCTATTTCATGATCACAGGCCTGGGAATCTTAAATGTTGTGTACTTCC
rJMFF040J06+ GATTAGACTACTTCTATTTCATGATCACAGGCCTGGGAATCTTAAATGTTGTGTACTTCC
JMFS018H02+ GATTAGACTACTTCTATTTCATGATCACAGGCCTGGGAATCTTAAATGTTGTGTACTTCC
rJMSF032J19+ GATTAGACTACTTCTATTTCATGATCACAGGCCTGGGAATCTTAAATGTTGTGTACTTCC
                      ____________________________________________________________
consensus GATTAGACTACTTCTATTTCATGATCACAGGCCTGGGAATCTTAAATGTTGTGTACTTCC
 
. : . : . : . : . : . :
rJMSF033H01+ TAGTATTTTCCAGGTGGTATGAGTACAAGGATGGAACTGAAGGAGCCATTAAAGATACTG
rJMFF040J06+ TAGTATTTTCCAGGTGGTATGAGTACAAGGATGGAACTGAAGGAGCCATTAAAGATACTG
JMFS018H02+ TAGTATTTTCCAGGTGGTATGAGTACAAGGATGGAACTGAAGGAGCCATTAAAGATACTG
rJMSF032J19+ TAGTATTTTCCAGGTGGTATGAGTACAAGGATGGAACTGAAGGAGCCATTAAAGATACTG
                      ____________________________________________________________
consensus TAGTATTTTCCAGGTGGTATGAGTACAAGGATGGAACTGAAGGAGCCATTAAAGATACTG
 
. : . : . : . : . : . :
rJMSF033H01+ AAATGGAACCAAAGAATCTTGACAACAAACATGCAGTTTAGTTTAAGATGGCTGTTGGAT
rJMFF040J06+ AAATGGAACCAAAGAATCTTGACAACAAACATGCAGTTTAGTTTAAGATGGCTGTTGGAT
JMFS018H02+ AAATGGAACCAAAGAATCTTGACAACAAACATGCAGTTTAGTTTAAGATGGCTGTTGGAT
rJMSF032J19+ AAATGGAACCAAAGAATCTTGACAACAAACATGCAGTTTAGTTTAAGATGGCTGTTGGAT
                      ____________________________________________________________
consensus AAATGGAACCAAAGAATCTTGACAACAAACATGCAGTTTAGTTTAAGATGGCTGTTGGAT
 
. : . : . : . : . : . :
rJMSF033H01+ TCTGGTATAGGATAGTTTGAATCTGACAGTTAGTCAGTTATTGTCCCTTATCAAATGAGG
rJMFF040J06+ TCTGGTATAGGATAGTTTGAATCTGACAGTTAGTCAGTTATTGTCCCTTATCAAATGAGG
JMFS018H02+ TCTGGTATAGGATAGTTTGAATCTGACAGTTAGTCAGTTATTGTCCCTTATCAAATGAGG
rJMSF032J19+ TCTGGTATAGGATAGTTTGAATCTGACAGTTAGTCAGTTATTGTCCCTTATCAAATGAGG
                      ____________________________________________________________
consensus TCTGGTATAGGATAGTTTGAATCTGACAGTTAGTCAGTTATTGTCCCTTATCAAATGAGG
 
. : . : . : . : . : . :
rJMSF033H01+ ATCTCTTATTAGGAATCATCATCAAGATTCCATTCTTAAACAATAAGTGACTTTGTTAGG
rJMFF040J06+ ATCTCTTATTAGGAATCATCATCAAGATTCCATTCTTAAACAATAAGTGACTTTGTTAGG
JMFS018H02+ ATCTCTTATTAGGAATC
rJMSF032J19+ ATCTCTTATTAGGAATCATCATCAAGATTCCATTCTTAAACAATAAGTGACTTTGTTAGG
                      ____________________________________________________________
consensus ATCTCTTATTAGGAATCATCATCAAGATTCCATTCTTAAACAATAAGTGACTTTGTTAGG
 
. : . : . : . : . : . :
rJMSF033H01+ ATAGAACTTAACTATCCCATGTAAATTCTATTCTAACAAAATCACTTGCTGGTTAAGAAT
rJMFF040J06+ ATAGAACTTAACTATCCCATGTAAATTCTATTCTAACAAAATCACTTGCTGGTTAAGAAT
rJMSF032J19+ ATAGAACTTAACTATCCCATCTAAATTCTATTCTAACAAAATCACTTGCTGGTTAAGAAT
                      ____________________________________________________________
consensus ATAGAACTTAACTATCCCATGTAAATTCTATTCTAACAAAATCACTTGCTGGTTAAGAAT
 
. : . : . : . : . : . :
rJMSF033H01+ GGAATCTTTATGATGATTCCTGATATTATGTGC
rJMFF040J06+ GGAATCTTTATGATGATTCCTGATATTATGTGC
rJMSF032J19+ GGAATCTTTATGATGATTCCTGATATTATGTGCATGTCACCCTGTATTAATAATGAATAT
                      ____________________________________________________________
consensus GGAATCTTTATGATGATTCCTGATATTATGTGCATGTCACCCTGTATTAATAATGAATAT