| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN003G23 | Sequence | 621 | 005731 (5) | ref|XP_009794649.1| | 6e-116 | PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like, partial [Nicotiana sy | |||||
| JMSF016F12 | Sequence | 499 | 011968 (2) | 733 | 005731 (5) | ref|XP_009794649.1| | 1e-117 | PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like, partial [Nicotiana sy | |||
| JMSF022C06 | Sequence | 635 | 013434 (2) | ref|XP_009603349.1| | 9e-63 | PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Nicotiana tomentosifo | 794 | 005731 (5) | emb|CAN88916.1| | 2e-127 | glutamyl tRNA Reductase [Nicotiana tabacum] |
| JMSF031G20 | Sequence | 654 | 011968 (2) | ref|XP_007018342.1| | 1e-58 | Glutamyl-tRNA reductase family protein [Theobroma cacao] gb|EOY15567.1| Glutamyl | 674 | 005731 (5) | ref|XP_009794649.1| | 1e-107 | PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like, partial [Nicotiana sy |
| JMSF032I21 | Sequence | 681 | 013434 (2) | ref|XP_009603349.1| | 4e-61 | PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Nicotiana tomentosifo | 191 | 005731 (5) | gb|EYU24305.1| | 1e-16 | hypothetical protein MIMGU_mgv1a0120041mg, partial [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
rJMSF022C06+ AGGAGATGAAAGATGCCG
____________________________________________________________
consensus AGGAGATGAAAGATGCCG
. : . : . : . : . : . :
rJMSF022C06+ AGATAATCTATAAGCCCATGTCCGAGATGNTAAACTGTGCTGCAGACTCAGATGTGATCT
____________________________________________________________
consensus AGATAATCTATAAGCCCATGTCCGAGATGNTAAACTGTGCTGCAGACTCAGATGTGATCT
. : . : . : . : . : . :
JMFN003G23- ACAAGCACGGCTTCAGAAACCGCCTTGTTTGTAAGAGAGAACGTGATTGGCCTTCCGC
rJMSF022C06+ TTACAAGCACGGCTTCAGAAACCGCCTTGTTTGTAAGAGAGAACGTGATTGGCCTTCCGC
____________________________________________________________
consensus TTACAAGCACGGCTTCAGAAACCGCCTTGTTTGTAAGAGAGAACGTGATTGGCCTTCCGC
. : . : . : . : . : . :
JMFN003G23- CTGTAGGCCCTAGCGTCGGGGGGCTAAGGCTTTTCGTGGACATTTCCGTCCCTAGGAATG
rJMSF022C06+ CTGTAGGCCCTAGCGTCGGGGGGCTAAGGCTTTTCGTGGACATTTCCGTCCCTAGGAATG
rJMSF016F12+ GCCCTAGCGTTGGGGGCTTAAGGCTTTTCGTGGATATCTCCGTTCCTAGGAACG
rJMSF031G20+ CCTAGGAACG
____________________________________________________________
consensus CTGTAGGCCCTAGCGTCGGGGGGCTAAGGCTTTTCGTGGACATTTCCGTCCCTAGGAATG
. : . : . : . : . : . :
JMFN003G23- TGGGTGCCTGTGTCGACGCTCTCGACACTGCACGAGTGTACAACGTGGACGATCTCAAGG
rJMSF022C06+ TGGGTGCCTGTGTCGACGCTCTCGACACTGCACGAGTGTACAACGTGGACGATCTCAAGG
rJMSF016F12+ TGGGTGCCTGTGTTGATGAGCTCGAGACTTCCCGAGTGTACAACGTGGATGACCTTAAGG
rJMSF031G20+ TGGGTGCCTGTGTTGATGAGCTCGAGACTTCCCGAGTGTACAACGTGGATGACCTTAAGG
____________________________________________________________
consensus TGGGTGCCTGTGTCGACGCTCTCGACACTGCACGAGTGTACAACGTGGACGATCTCAAGG
. : . : . : . : . : . :
JMFN003G23- AGGTCGTCGCTGCAAACAAGGAGGACCGCCTTCGCAAAGCAATGGAAGCACAGGCAATTA
rJMSF022C06+ AGGTCGTCGCTGCAAACAAGGAGGACCGCCTTCGCAAAGCAATGGAAGCACAGGCAATTA
rJMSF016F12+ AGGTCGTGGCTGCCAACAAGGAAGACCGGGTTCGAAAAGCAATGGAAGCTCAGGCAATAA
rJMSF031G20+ AGGTCGTGGCTGCCAACAAGGAAGACCGGGTTCGAAAAGCAATGGAAGCTCAGGCGATAA
____________________________________________________________
consensus AGGTCGTCGCTGCAAACAAGGAGGACCGCCTTCGCAAAGCAATGGAAGCACAGGCAATTA
. : . : . : . : . : . :
JMFN003G23- TCTCCGAGGAGTCCAGCCAATTCGAAGCCTGGAGGGATTCACTGGAAACCGTCCCGACCA
rJMSF022C06+ TCTCCGAGGAGTCCAGCCAATTCGAAGCCTGGAGGGATTCACTGGAAACCGTCCCGACCA
rJMSF016F12+ TTTCTGAGGAATCAAAACAATTTGAAGCTTGGAGGGATTCACTGGAAACTGTCCCCACCA
rJMSF031G20+ TTTCTGAGGAATCAAAACAATTTGAAGCTTGGAGGGATTCACTGGAAACTGTCCCCACCA
____________________________________________________________
consensus TCTCCGAGGAGTCCAGCCAATTCGAAGCCTGGAGGGATTCACTGGAAACCGTCCCGACCA
. : . : . : . : . : . :
JMFN003G23- TCAAGAAACTGAGAGCCTATGCAGAGCGAATACGAGTTGCAGAGCTCGAGAAATGCATGT
rJMSF022C06+ TCAAGAAACTGAGAGCCTATGCAGAGCGAATACGAGTTGCAGAGCTCGAGAAATGCATGT
rJMSF016F12+ TCAAGAAACTGAGGGGTTATGCAGAGAGAATCCGAGCTGCAGAGCTCGAGAAATGCTTGT
rJMSF031G20+ TCAAGAAACTGAGGGGTTATGCAGAGAGAATCCGAGCTGCAGAGCTCGAGAAATGCTTGT
____________________________________________________________
consensus TCAAGAAACTGAGAGCCTATGCAGAGCGAATACGAGTTGCAGAGCTCGAGAAATGCATGT
. : . : . : . : . : . :
JMFN003G23- CGAAAATGGGCGATGACATCACAAAGAAGGCGAGGAAAGCGGTGGATGATCTCAGCAGAG
rJMSF032I21+ TCAGCAGAG
rJMSF022C06+ CGAAAATGGGCGATGACATCACAAAGAAGGCGAGGAAAGCGGTGGATGATCTCAGCAGAG
rJMSF016F12+ CGAAAATGGGGGATGACATCACAAAAAAGACGAGGAAAGCAGTGGATGATCTCAGCAGAG
rJMSF031G20+ CGAAAATGGGGGATGACATCACAAAAAAGACGAGGAAAGCAGTGGATGATCTCAGCAGAG
____________________________________________________________
consensus CGAAAATGGGCGATGACATCACAAAGAAGGCGAGGAAAGCGGTGGATGATCTCAGCAGAG
. : . : . : . : . : . :
JMFN003G23- GGATAGTAAACAAGATCCTCCATGGTCCTATGCAGCATTTAAGGTGCGATGGAAGCGATA
rJMSF032I21+ GGNTAGTNAACAAGATCCTCCATGGTCNTNTGCAGCATNTNAGGTGNGATGGGAGCGATA
rJMSF022C06+ GGATAGTAAACAAGATCCTCCATGGTCCTATGCAGCATTTAAGGTGCGATGGGAGCGATA
rJMSF016F12+ GCATAGTAAACAAGCTTCTTCATGGTCCAATGCAGCATCTGAGGTGTGATGGGAGCGATA
rJMSF031G20+ GCATAGTAAACAAGCTTCTTCATGGTCCAATGCAGCATCTGAGGTGTGATGGGAGCGATA
____________________________________________________________
consensus GGATAGTAAACAAGATCCTCCATGGTCCTATGCAGCATTTAAGGTGCGATGGGAGCGATA
. : . : . : . : . : . :
JMFN003G23- GCCGGACTCTAAGCGAAACCCTCGAAAACATGCATGCCCTTAACAGGATGTTCAGCCTGG
rJMSF032I21+ GCCNGNCTATNAGCGAAACCCTNGANANCATGCNTGCCCTTNACAGGATGTTCNNCCTGG
rJMSF022C06+ GCCGGACTCTAAGCGAAACCCTCGAAAACATGCATGCCCTTAACAGGATGTTCAGCCTGG
rJMSF016F12+ GCCGCACTTTGAGCGAGACCCTCGAGAACATGCACGCTCTAAACCGGATGTTCAGCCTCG
rJMSF031G20+ GCCGCACTTTGAGCGAGACCCTCGAGAACATGCACGCTCTAAACCGGATGTTCAGCCTCG
____________________________________________________________
consensus GCCGGACTCTAAGCGAAACCCTCGAAAACATGCATGCCCTTAACAGGATGTTCAGCCTGG
. : . : . : . : . : . :
JMFN003G23- AAACTGAGATATCAGTGCTGGAACAGAAGATTAGAGCTAAGGTTGAGCAATCACAGAA
rJMSF032I21+ AAACTGAGATNTCAGTGCTGGANCAGAAGNTTAGAGCTAAGGTTG
rJMSF022C06+ AAACTGAGATATCAGTGCTGGAACAGAAGATTAGAGCTAAGGTTGAGCAATCACAGAA
rJMSF016F12+ AGACTGAAATATCGGTGTTGGAACAGAAGATTAGAGCCAAAGTGGAGCAAACACAGAAGT
rJMSF031G20+ AGACTGAAATATCGGTGTTGGAACAGAAGATTAGAGCCAAAGTGGAGCAAACACAGAAGT
____________________________________________________________
consensus AAACTGAGATATCAGTGCTGGAACAGAAGATTAGAGCTAAGGTTGAGCAATCACAGAAGT
. : . : . : . : . : . :
rJMSF016F12+ GACAACCTT
rJMSF031G20+ GACAACCTTAATGGGGGCCAAAAAATGTATGTTTTCTCTGTTGGTTCTGTTGTAAATTCT
____________________________________________________________
consensus GACAACCTTAATGGGGGCCAAAAAATGTATGTTTTCTCTGTTGGTTCTGTTGTAAATTCT
. : . : . : . : . : . :
rJMSF031G20+ GGGTGGATATACTTAACAGGACATGATTACTTTGGGGTGATCTATCATTGTTGGTTTGTT
____________________________________________________________
consensus GGGTGGATATACTTAACAGGACATGATTACTTTGGGGTGATCTATCATTGTTGGTTTGTT
. : . : . : . : . : . :
rJMSF031G20+ GTTGCTGTTGATTTCTGGCTTTTTCTCAACACATCTGAAAGGAGATTTCCTTCTTTGTAT
____________________________________________________________
consensus GTTGCTGTTGATTTCTGGCTTTTTCTCAACACATCTGAAAGGAGATTTCCTTCTTTGTAT