Contig 005730:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031E21Sequence603002417 (2)ref|XP_009798863.1|3e-80PREDICTED: 4-coumarate--CoA ligase 1 [Nicotiana sylvestris] sp|O24145.1|4CL1_TOB682005730 (2)gb|AEO52694.1|7e-814-coumarate:CoA ligase [Petunia x hybrida]
JMSF043O24Sequence622002417 (2)ref|XP_009798863.1|7e-82PREDICTED: 4-coumarate--CoA ligase 1 [Nicotiana sylvestris] sp|O24145.1|4CL1_TOB680005730 (2)gb|AEO52694.1|3e-1144-coumarate:CoA ligase [Petunia x hybrida]

Alignment

This contig is upended


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rJMSF043O24+                                  CTGGTTCGTGTGGGACAGTTGTTAGAAATGCAGAAA
                      ____________________________________________________________
consensus                                     CTGGTTCGTGTGGGACAGTTGTTAGAAATGCAGAAA
 
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rJMSF043O24+          TGAGAATTGTGGATCCGGATACTGGATCCTCTTTACCCCGGAACCAACCGGGAGAAATAT
rJMSF031E21+                                              CCCGGAACCNACCGGGAGAAATAT
                      ____________________________________________________________
consensus             TGAGAATTGTGGATCCGGATACTGGATCCTCTTTACCCCGGAACCAACCGGGAGAAATAT
 
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rJMSF043O24+          GCATTAGGGGTGACCAAATCATGAAAGGTTATTTGAATGATCCAGAGGCTACAGAGAGAA
rJMSF031E21+          GCATTA-GGGNGACCCAATCATGAAAGGTTA-TTGAATGATCCAGAGGCTACAGAGAGAA
                      ____________________________________________________________
consensus             GCATTAGGGGTGACCCAATCATGAAAGGTTATTTGAATGATCCAGAGGCTACAGAGAGAA
 
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rJMSF043O24+          CAATCGACAAGGAAGGATGGTTACACACCGGAGATATAGGATACATCGACGATGACGATG
rJMSF031E21+          CAATCGACAAGGAAGGATGGTTACACACCGGAGATATAGGATACATCGACGATGACGATG
                      ____________________________________________________________
consensus             CAATCGACAAGGAAGGATGGTTACACACCGGAGATATAGGATACATCGACGATGACGATG
 
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rJMSF043O24+          AGCTTTTCATCGTGGATCGCCTCAAGGAGCTTATCAAGTACAAGGGCTTTCAGGTCGCCC
rJMSF031E21+          AGCTTTTCATCGTGGATCGCCTCAAGGAGCTTATCAAGTACAAGGGCTTTCAGGTCGCCC
                      ____________________________________________________________
consensus             AGCTTTTCATCGTGGATCGCCTCAAGGAGCTTATCAAGTACAAGGGCTTTCAGGTCGCCC
 
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rJMSF043O24+          CAGCTGAACTTGAAGCCTTACTCCTTACCCACCCACAAATTTCTGATGCTGCTGTTATCC
rJMSF031E21+          CAGCTGAACTTGAAGCCTTACTCCTTACCCACCCACAAATTTCTGATGCTGCTGTTATCC
                      ____________________________________________________________
consensus             CAGCTGAACTTGAAGCCTTACTCCTTACCCACCCACAAATTTCTGATGCTGCTGTTATCC
 
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rJMSF043O24+          CCATGAAAGATGAGCAGGCAGGGGAAGTTCCAGTTGCTTTTGTTGTTAAAACTAATGGAT
rJMSF031E21+          CCATGAAAGATGAGCAGGCAGGGGAAGTTCCAGTTGCTTTTGTTGTTAAAACTAATGGAT
                      ____________________________________________________________
consensus             CCATGAAAGATGAGCAGGCAGGGGAAGTTCCAGTTGCTTTTGTTGTTAAAACTAATGGAT
 
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rJMSF043O24+          GTAGCCTCACTGAGGATGAAGTTAAAGAGTTTGTCTCTAAACAGGTGATATTTTACAAGA
rJMSF031E21+          GTAGCCTCACTGAGGATGAAGTTAAAGAGTTTGTCTCTAAACAGGTGATATTTTACAAGA
                      ____________________________________________________________
consensus             GTAGCCTCACTGAGGATGAAGTTAAAGAGTTTGTCTCTAAACAGGTGATATTTTACAAGA
 
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rJMSF043O24+          GAATAAAAAAGGTATTTTTTGTTGATTCTGTTCCAAAGTCTCCCTCAGGCAAAATTCTAA
rJMSF031E21+          GAATAAAAAAGGTATTTTTTGTTGATTCTGTTCCAAAGTCTCCCTCAGGCAAAATTCTAA
                      ____________________________________________________________
consensus             GAATAAAAAAGGTATTTTTTGTTGATTCTGTTCCAAAGTCTCCCTCAGGCAAAATTCTAA
 
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rJMSF043O24+          GAAAGAACCTAAGAGCAAGACTAGAAGCTGGAATCCCTAATTAGTTCTCATCCCATCCAT
rJMSF031E21+          GAAAGAACCTAAGAGCAAGACTAGAAGCTGGAATCCCTAATTAGTTCTCATCCCATCCAT
                      ____________________________________________________________
consensus             GAAAGAACCTAAGAGCAAGACTAGAAGCTGGAATCCCTAATTAGTTCTCATCCCATCCAT
 
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rJMSF043O24+          CCCTGTGGGACTGCACTGCAAAAATTATTGATTTCATTCTCATCTGTTGTCTTTACAATA
rJMSF031E21+          CCCTGTGGGACTGCACTGCAAAAATTATTGATTTCATTCTCATCTGTTGTCTTTACAATA
                      ____________________________________________________________
consensus             CCCTGTGGGACTGCACTGCAAAAATTATTGATTTCATTCTCATCTGTTGTCTTTACAATA
 
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rJMSF043O24+          TCATATTATATATATCATTTCCAAC                                   
rJMSF031E21+          TCATATTATATATATCATTTCCAACACTGCTTAATGTTAATGCTATAAAGAACACTGAAT
                      ____________________________________________________________
consensus             TCATATTATATATATCATTTCCAACACTGCTTAATGTTAATGCTATAAAGAACACTGAAT
 
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rJMSF031E21+          TGAATGTTTGATAGTATTATATCCCCACTGCAATTTAATCATCTCAATATGATTAAATGC
                      ____________________________________________________________
consensus             TGAATGTTTGATAGTATTATATCCCCACTGCAATTTAATCATCTCAATATGATTAAATGC