Contig 005729:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF034B12+                                                      TCGGTCATAAATCTGA
                      ____________________________________________________________
consensus                                                         TCGGTCATAAATCTGA
 
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rJMSF034B12+          GGTTTGTGGGCTGAAATGGTCTCATGATGACCGAGAACTGGCATCTGGTGGCAATGACAA
rJMSF031B01+                                                      CTGGTGGCAATGACAA
                      ____________________________________________________________
consensus             GGTTTGTGGGCTGAAATGGTCTCATGATGACCGAGAACTGGCATCTGGTGGCAATGACAA
 
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rJMSF034B12+          TCAGCTTTTGGTCTGGAATCTGCACTCCCAGCAGCCAACTTTGAGACTAACAGAGCACAC
rJMSF031B01+          TCAGCTTTTGGTCTGGAATCTGCACTCCCAGCAGCCAACTTTGAGACTAACAGAGCACAC
                      ____________________________________________________________
consensus             TCAGCTTTTGGTCTGGAATCTGCACTCCCAGCAGCCAACTTTGAGACTAACAGAGCACAC
 
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rJMSF034B12+          TGCTGCTGTAAAAGCCATTACCTGGTCTCCTCACCAAAGTGGCCTTCTTGCATCAGGAGG
rJMSF031B01+          TGCTGCTGTAAAAGCCATTACCTGGTCTCCTCACCAAAGTGGCCTTCTTGCATCAGGAGG
                      ____________________________________________________________
consensus             TGCTGCTGTAAAAGCCATTACCTGGTCTCCTCACCAAAGTGGCCTTCTTGCATCAGGAGG
 
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rJMSF034B12+          GGGAACTGCAGACCGCTGCATTCGCTTCTGGAACACCAGTAATGGCAATCAATTGAATAG
rJMSF031B01+          GGGAACTGCAGACCGCTGCATTCGCTTCTGGAACACCAGTAATGGCAATCAATTGAATAG
                      ____________________________________________________________
consensus             GGGAACTGCAGACCGCTGCATTCGCTTCTGGAACACCAGTAATGGCAATCAATTGAATAG
 
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rJMSF034B12+          CGTGGATACTGGAAGCCAGGTCTGCAATCTCGCCTGGAGCAAAAATGTAAATGAAATAGT
rJMSF031B01+          CGTGGATACTGGAAGCCAGGTCTGCAATCTCGCCTGGAGCAAAAATGTAAATGAAATAGT
                      ____________________________________________________________
consensus             CGTGGATACTGGAAGCCAGGTCTGCAATCTCGCCTGGAGCAAAAATGTAAATGAAATAGT
 
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rJMSF034B12+          TAGCACCCATGGATACTCCCAAAATCAAGTAATGGTGTGGAAGTATCCATCCATGTCCAA
rJMSF031B01+          TAGCACCCATGGATACTCCCAAAATCAATTAATGGTGTGGAAGTATCCATCCATGTCCAA
                      ____________________________________________________________
consensus             TAGCACCCATGGATACTCCCAAAATCAATTAATGGTGTGGAAGTATCCATCCATGTCCAA
 
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rJMSF034B12+          GGTGGCAACTCTAACTGGCCACAGCTTGCGGGTACTTTACCTTGCTATGTCGCCCGATGG
rJMSF031B01+          GGTGGCAACTCTAACTGGCCACAGCTTGCGGGTACTTTACCTTGCTATGTCGCCCGATGG
                      ____________________________________________________________
consensus             GGTGGCAACTCTAACTGGCCACAGCTTGCGGGTACTTTACCTTGCTATGTCGCCCGATGG
 
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rJMSF034B12+          TCAGACAATAGTGACTGGAGCTGGAGATGAGACTCTCAGGTTTTGGAATGTCTTCCNTTC
rJMSF031B01+          TCAGACAATAGTGACTGGAGCTGGAGATGAGACTCTCAGGTTTTGGAATGTCTTCCCTTC
                      ____________________________________________________________
consensus             TCAGACAATAGTGACTGGAGCTGGAGATGAGACTCTCAGGTTTTGGAATGTCTTCCCTTC
 
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rJMSF034B12+          TGCAAAAACACCTGCACCGGTCAAAGACACAGGACTGTGGTCTCTAGGAAGAACACATAT
rJMSF031B01+          TGCAAAAACACCTGCACCGGTCAAAGACACAGGACTGTGGTCTCTAGGAAGAACACATAT
                      ____________________________________________________________
consensus             TGCAAAAACACCTGCACCGGTCAAAGACACAGGACTGTGGTCTCTAGGAAGAACACATAT
 
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rJMSF034B12+          CAGATGACAGACAGACCGACCTTTCTCTGATTATATTTGTAAATTATAATACTTTCTCAT
rJMSF031B01+          CAGATGACAGACAGACCGACCTTTCTCTGATTATATTTGTAAATTATAATACTTTCTCAT
                      ____________________________________________________________
consensus             CAGATGACAGACAGACCGACCTTTCTCTGATTATATTTGTAAATTATAATACTTTCTCAT
 
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rJMSF034B12+          GTTCTTCAGCTATGTCCAGATTGTGAAAGTGTATAGCTTGAAATGTTTTTTTATGTGGGT
rJMSF031B01+          GTTCTTCAGCTATGTCCAGATTGTGAAAGTGTATAGCTTGAAATGTTTTTTTATGTGGGT
                      ____________________________________________________________
consensus             GTTCTTCAGCTATGTCCAGATTGTGAAAGTGTATAGCTTGAAATGTTTTTTTATGTGGGT
 
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rJMSF034B12+          TTTCAAGAAGATGTCTATAACTCTCAATTATTTTTTTTAGATGTGGAGTGTACCCAAT  
rJMSF031B01+          TTTCAAGAAGATGTCTATAACTCTCAATTATTTTTTTTAGATGTGGAGTGTACCCAATTT
                      ____________________________________________________________
consensus             TTTCAAGAAGATGTCTATAACTCTCAATTATTTTTTTTAGATGTGGAGTGTACCCAATTT