Contig 005728:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006D20Sequence353009173 (2)ref|XP_009609458.1|3e-38PREDICTED: microtubule-associated protein 70-3-like [Nicotiana tomentosiformis]726005728 (4)emb|CDP16283.1|2e-88unnamed protein product [Coffea canephora]
JMFF011L23Sequence505013421 (8)ref|XP_009609458.1|3e-54PREDICTED: microtubule-associated protein 70-3-like [Nicotiana tomentosiformis]738005728 (4)ref|XP_009610620.1|2e-15PREDICTED: microtubule-associated protein 70-2-like [Nicotiana tomentosiformis]
JMSF030O18Sequence549013421 (8)ref|XP_009609458.1|3e-24PREDICTED: microtubule-associated protein 70-3-like [Nicotiana tomentosiformis]768005728 (4)ref|XP_009768285.1|1e-10PREDICTED: microtubule-associated protein 70-2-like [Nicotiana sylvestris]
JMSF033L15Sequence176013421 (8)760005728 (4)ref|XP_009610620.1|6e-25PREDICTED: microtubule-associated protein 70-2-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF006D20+                   TTTTGCCCAAGCGATCACCGTCCTTTCAAATGAGGTCTTCTGGGATCAGTT
                      ____________________________________________________________
consensus                      TTTTGCCCAAGCGATCACCGTCCTTTCAAATGAGGTCTTCTGGGATCAGTT
 
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rJMFF006D20+          CTGTCCCTGAAGCATGCGAAAGGGACATCAAAGTCATTTGATGGTGGCTCAAGGTCATTG
                      ____________________________________________________________
consensus             CTGTCCCTGAAGCATGCGAAAGGGACATCAAAGTCATTTGATGGTGGCTCAAGGTCATTG
 
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rJMFF006D20+          GACCGAGGTAAAAACCTTCTTAGTGGAACTGGTCCAAATTTTAAGCTCACTCAGTCCTGT
                      ____________________________________________________________
consensus             GACCGAGGTAAAAACCTTCTTAGTGGAACTGGTCCAAATTTTAAGCTCACTCAGTCCTGT
 
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rJMFF006D20+          GATGGAGCTAAGGATAGTGGGCCTGAAAATAAATGGAAAGAAAATCAAGATGAAAAGCCC
                      ____________________________________________________________
consensus             GATGGAGCTAAGGATAGTGGGCCTGAAAATAAATGGAAAGAAAATCAAGATGAAAAGCCC
 
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rJMFF006D20+          AATGACTTGCAAGTAACAGAAACAGAGGATACTGTCCCGGGAGTATTACACGATTTGCTA
                      ____________________________________________________________
consensus             AATGACTTGCAAGTAACAGAAACAGAGGATACTGTCCCGGGAGTATTACACGATTTGCTA
 
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rJMFF006D20+          CAAAAGGAGGTGGTTTCCTTGAGAAAAGCATGTCATGAAAAGGATCAAAGTCTAAAAGAC
                      ____________________________________________________________
consensus             CAAAAGGAGGTGGTTTCCTTGAGAAAAGCATGTCATGAAAAGGATCAAAGTCTAAAAGAC
 
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rJMFF006D20+          AAGGATGATGCAATTGAGATGCTAGCCAAGAAAGTAGAGACTCTAACAAAAGCAATGGAA
rJMSF033L15+            GGATGATGCTATAGAGATGTTAGCTAAGAAAGTAGACACTCTAACAAAAGCAATGGAA
rJMFF011L23+                                                         AAAAGCAATGGAA
                      ____________________________________________________________
consensus             AAGGATGATGCTATTGAGATGTTAGCTAAGAAAGTAGAGACTCTAACAAAAGCAATGGAA
 
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rJMFF006D20+          GTTGAGGCTAAAAAAATGAGAAGGGAAGTTGCTGCAATGGAAAAGGAGGTTGCTGCGATA
rJMSF033L15+          GTTGAGGCTAAAAAAATGAGAAGGGAGGTTGCTGCCATGGAGAAGGAGGTGGCTGCAATG
rJMFF011L23+          GTTGAGGCTAAAAAAATGAGAAGGGAGGTTGCTGCCATGGAGAAGGAGGTGGCTGCAATG
rJMSF030O18+                      AAAATGAGAAGGGAGGTTGCTGCCATGGAGAAGGAGGTGGCTGCCATG
                      ____________________________________________________________
consensus             GTTGAGGCTAAAAAAATGAGAAGGGAGGTTGCTGCCATGGAGAAGGAGGTGGCTGCAATG
 
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rJMFF006D20+          CGAGTGGAGAGGGAACAAGAAAATAGGGCCAATCGACTTGGAAATTCAAGGGGTTCTGTC
rJMSF033L15+          CGAGTGGATAAGGAACATGACAATAGGGCAAAACAATTTGGAAATTCCAAGGGTCCTGTC
rJMFF011L23+          CGAGTGGATAAGGAACATGACAATAGGGCAAAACAATTTGGAAATTCCAAGGGTCCTGTC
rJMSF030O18+          CGAGTGGATAAGGAACATGACAATAGGGCAAANCAATTTGGAAATTCCAAGGGTCCTGTC
                      ____________________________________________________________
consensus             CGAGTGGATAAGGAACATGACAATAGGGCAAAACAATTTGGAAATTCCAAGGGTCCTGTC
 
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rJMFF006D20+          AACAGTTCTCAG                                                
rJMSF033L15+          AACAGTTCTCAGCTCCTTCCTGGAAGGACTGTAGCTAGAAGTGGAGTAACACGCAGCATG
rJMFF011L23+          AACAGTTCTCAGCTCCTTCCTGGAAGGACTGTAGCTAGAAGTGGAGTAACACGCAGCATG
rJMSF030O18+          AACAGTTCTCAGCTCCTTCCTGGAAGGACTGTAGCTAGAAGTGGAGTAACACGCAGCATG
                      ____________________________________________________________
consensus             AACAGTTCTCAGCTCCTTCCTGGAAGGACTGTAGCTAGAAGTGGAGTAACACGCAGCATG
 
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rJMSF033L15+          CAATAGTAGTAAGGAAACTCCCCGAGTACTGCTGTAAGAAGCAATTATGCATAGATTGGC
rJMFF011L23+          CAATAGTAGTAAGGAAACTCCCCGAGTACTGCTGTAAGAAGCAATTATGCATAGATTGGC
rJMSF030O18+          CAATAGTAGTAAGGAAACTCCCCGAGTACTGCTGTAAGAAGCAATTATGCATAGATTGGC
                      ____________________________________________________________
consensus             CAATAGTAGTAAGGAAACTCCCCGAGTACTGCTGTAAGAAGCAATTATGCATAGATTGGC
 
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rJMSF033L15+          CTCTGCTCTAAATTACTTATCCATTATCCTATTCCACCCCTTATATTGTTTATTGTAAAA
rJMFF011L23+          CTCTGCTCTAAATTACTTATCCATTATCCTATTCCACCCCTTATATTGTTTATTGTAAAA
rJMSF030O18+          CTCTGCTCTAAATTACTTATCCATTATCCTATTCCACCCCTTATATTGTTTATTGTAAAA
                      ____________________________________________________________
consensus             CTCTGCTCTAAATTACTTATCCATTATCCTATTCCACCCCTTATATTGTTTATTGTAAAA
 
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rJMSF033L15+          TCATAACAAAGCATGAAAAACGACTTTGATCGATCGATCCCTCTGCTCTAGTGGGGAATG
rJMFF011L23+          TCATAACAAAGCATGAAAAACGACTTTGATCGATCGATCCCTCTGCTCTAGTGGGGAATG
rJMSF030O18+          TCATAACAAAGCATGAAAAACGACTTTGATCGATCGATCCCTCTGCTCTAGTGGGGAATG
                      ____________________________________________________________
consensus             TCATAACAAAGCATGAAAAACGACTTTGATCGATCGATCCCTCTGCTCTAGTGGGGAATG
 
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rJMSF033L15+          TGAAAAATTAGTCGAGCAGCAGAGAAAACCAATATAGATGGATTTGGTGTATTTCCAAGT
rJMFF011L23+          TGAAAAATTAGTCGAGCAGCAGAGAAAACCAATATAGATGGATTTGGTGTATTTCCAAGT
rJMSF030O18+          TGAAAAATTAGTCGAGCAGCAGAGAAAACCAATATAGATGGATTTGGTGTATTTCCAAGT
                      ____________________________________________________________
consensus             TGAAAAATTAGTCGAGCAGCAGAGAAAACCAATATAGATGGATTTGGTGTATTTCCAAGT
 
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rJMSF033L15+          TAGACTACTGATCCCTCTCTCCTGTCTGTCTGGTTGTGGCAACATGAAGTTTAGCTGTTA
rJMFF011L23+          TAGACTACTGATCCCTCTCTCCTGTCTGTCTGGTTGTGGCAACATGAAGTTTAGCTGTTA
rJMSF030O18+          TAGACTACTGATCCCTCTCTCCTGTCTGTCTGGTTGTGGCAACATGAAGTTTAGCTGTTA
                      ____________________________________________________________
consensus             TAGACTACTGATCCCTCTCTCCTGTCTGTCTGGTTGTGGCAACATGAAGTTTAGCTGTTA
 
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rJMSF033L15+          AGGGGAGAAAACCCACCCATGGAATTCGATATATGTTTCTGACTTTAGACTGATCCCTCT
rJMFF011L23+          AGGGGAGAAAACCCACCCATGGAATTCGATATATGTTTCTGACTTTAGACTGATCCCTCT
rJMSF030O18+          AGGGGAGAAAACCCACCCATGGAATTCGATATATGTTTCTGACTTTAGACTGATCCCTCT
                      ____________________________________________________________
consensus             AGGGGAGAAAACCCACCCATGGAATTCGATATATGTTTCTGACTTTAGACTGATCCCTCT
 
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rJMSF033L15+          GCTTAGAAATCACCAAGAAAAGATCAAGGTTGAGCTAACTCTCTTTTGGCTGAATGATAT
rJMFF011L23+          GCTTAGAAATCACCAAGAAAAGATCAAGGTTGAGCTAACTCTCTTTTGGCTGAATGATAT
rJMSF030O18+          GCTTAGAAATCACCAAGAAAAGATCAAGGTTGAGCTAACTCTCTTTTGGCTGAATGATAT
                      ____________________________________________________________
consensus             GCTTAGAAATCACCAAGAAAAGATCAAGGTTGAGCTAACTCTCTTTTGGCTGAATGATAT
 
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rJMSF033L15+          CAGTGGCAGTGATTGCGAGGCTGTATAGGTGGCTTGATGTCATTTACTTTATCCAGCTTT
rJMFF011L23+          CAGTGGCAGTGATTGCGAGGCTGTATAGGTGGCTTGATGTCATTTACTTTATCCAGCTTT
rJMSF030O18+          CAGTGGCAGTGATTGCGAGGCTGTATAGGTGGCTTGATGTCATTTACTTTATCCAGCTTT
                      ____________________________________________________________
consensus             CAGTGGCAGTGATTGCGAGGCTGTATAGGTGGCTTGATGTCATTTACTTTATCCAGCTTT
 
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rJMSF033L15+          TTTTAAAATTATTATTAAACCACGTTTGCAGTCTGTATTTGT                  
rJMFF011L23+          TTTTAAAATTATTATTAAACCACGTTTGCAGTCTGTATTTGTAATATGCAAGCTAGTGTG
rJMSF030O18+          TTTTAAAATTATTATTAAACCACGTTTGCAGTCTGTATTTGTAATATGCAAGCTAGTGTG
                      ____________________________________________________________
consensus             TTTTAAAATTATTATTAAACCACGTTTGCAGTCTGTATTTGTAATATGCAAGCTAGTGTG
 
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rJMFF011L23+          TGATA                                                       
rJMSF030O18+          TGATATGGTTAATGGTTCCAGTTTGTCAATATTCTTGTATTGAGTGAGACTACGATCAGA
                      ____________________________________________________________
consensus             TGATATGGTTAATGGTTCCAGTTTGTCAATATTCTTGTATTGAGTGAGACTACGATCAGA