Contig 005727:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015O08Sequence431016742gb|KDO61451.1|1e-49hypothetical protein CISIN_1g042966mg, partial [Citrus sinensis]717005727 (2)emb|CDP09961.1|6e-72unnamed protein product [Coffea canephora]
JMSF030O09Sequence670022157ref|XP_006355455.1|2e-79PREDICTED: chaperone protein dnaJ 13-like isoform X1 [Solanum tuberosum]720005727 (2)emb|CDP09961.1|1e-70unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF015O08+                                                                     T
rJMSF030O09+                                                                     T
                      ____________________________________________________________
consensus                                                                        T
 
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rJMSF015O08+          ACGTCATTATACCTTCTACTCAAGACATATATTCTGAAACCGTATTTTCTCAAATGGGAA
rJMSF030O09+          ACGTCATTATACCTTCTACTCAAGACATATATTCTGAAACCGTATTTTCTCAAATGGGAA
                      ____________________________________________________________
consensus             ACGTCATTATACCTTCTACTCAAGACATATATTCTGAAACCGTATTTTCTCAAATGGGAA
 
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rJMSF015O08+          AATCAGCGGGAGTTGGAGAGTGCTGAAAAAACTCGTGCTCAGGTTCGAGAGGCAAGAGCT
rJMSF030O09+          AATCAGCGGGAGTTGGAGAGTGCTGAAAAAACTCGTGCTCAGGTTCGAGAGGCAAGAGCT
                      ____________________________________________________________
consensus             AATCAGCGGGAGTTGGAGAGTGCTGAAAAAACTCGTGCTCAGGTTCGAGAGGCAAGAGCT
 
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rJMSF015O08+          GCTGCTGAGAAAGCCCAGCAACTATTAGAGAACGTTGCGAACCGGAAAAGAACTCGACAG
rJMSF030O09+          GCTGCTGAGAAAGCCCAGCAACTATTAGAGAACGTTGCGAACCGGAAAAGAACTCGACAG
                      ____________________________________________________________
consensus             GCTGCTGAGAAAGCCCAGCAACTATTAGAGAACGTTGCGAACCGGAAAAGAACTCGACAG
 
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rJMSF015O08+          CTAGAAACTGGCGGACTTGTTGTAACAAAAGCAATATATGGAAGCCATAAAGCTCTCAAG
rJMSF030O09+          CTAGAAACTGGCGGACTTGTTGTAACAAAAGCAATATATGGAAGCCATAAAGCTCTCAAG
                      ____________________________________________________________
consensus             CTAGAAACTGGCGGACTTGTTGTAACAAAAGCAATATATGGAAGCCATAAAGCTCTCAAG
 
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rJMSF015O08+          GATCGAACTAAAAACACTGCAGAAACCGATGATGGGGTCTTGTCACAAATCGTGGATGTC
rJMSF030O09+          GATCGAACTAAAAACACTGCAGAAACCGATGATGGGGTCTTGTCACAAATCGTGGATGTC
                      ____________________________________________________________
consensus             GATCGAACTAAAAACACTGCAGAAACCGATGATGGGGTCTTGTCACAAATCGTGGATGTC
 
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rJMSF015O08+          ACTCTACCTTTGAATTTTCTGGTGAACGATTCTGGACAACTAAAGCTACACGAGGGCGTT
rJMSF030O09+          ACTCTACCTTTGAATTTTCTGGTGAACGATTCTGGACAACTAAAGCTACACGAGGGCGTT
                      ____________________________________________________________
consensus             ACTCTACCTTTGAATTTTCTGGTGAACGATTCTGGACAACTAAAGCTACACGAGGGCGTT
 
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rJMSF015O08+          AAGAAATCGGGAATAATGGGATTTTGTGATCCTTGTCCTGGAGAACCTAAGCAGTTATAT
rJMSF030O09+          AAGAAATCGGGAATAATGGGATTTTGTGATCCTTGTCCTGGAGGACCTAAGCAGTTATAT
                      ____________________________________________________________
consensus             AAGAAATCGGGAATAATGGGATTTTGTGATCCTTGTCCTGGAGGACCTAAGCAGTTATAT
 
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rJMSF015O08+          GTGGAATATACATTTGGAGGCAATAAATTTGAGGTGACTGTTGATGATTATGAGCAATTG
rJMSF030O09+          GTGGAATATACATTTGGAGGCAATAAATTTGAGGTGACTGTTGATGATTATGAGCAATTG
                      ____________________________________________________________
consensus             GTGGAATATACATTTGGAGGCAATAAATTTGAGGTGACTGTTGATGATTATGAGCAATTG
 
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rJMSF015O08+          ATTATACCCCAGGAAGCACACAGAATTTGACTTCCATCTGATATTCAAAGTTTTGCTTTG
rJMSF030O09+          ATTATACCCCAGGAAGCACACAGAATTTGACTTCCATCTGATATTCAAAGTTTTGCTTTG
                      ____________________________________________________________
consensus             ATTATACCCCAGGAAGCACACAGAATTTGACTTCCATCTGATATTCAAAGTTTTGCTTTG
 
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rJMSF015O08+          TATCCAAAGAAACAATAATTTATCAATGCTGTGATGCTGAGATATGTATTCTGCCAATTG
rJMSF030O09+          TATCCAAAGAAACAATAATTTATCAATGCTGTGATGCTGAGATATGTATTCTGCCAATTG
                      ____________________________________________________________
consensus             TATCCAAAGAAACAATAATTTATCAATGCTGTGATGCTGAGATATGTATTCTGCCAATTG
 
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rJMSF015O08+          TGGAATAGATCATTAAGAACAATTTTGTTGGTATTTATAATAGTTAGCATATTAGCCAAT
rJMSF030O09+          TGGAATAGATCATTAAGAACAATTTTGTT-GTATTTATAATAGTTAGCATATTAGCCAAT
                      ____________________________________________________________
consensus             TGGAATAGATCATTAAGAACAATTTTGTTGGTATTTATAATAGTTAGCATATTAGCCAAT
 
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rJMSF015O08+          TTTGGCTTATTTGACCACGATTAGTTGTTTTGA-CTTGGTTAAACAACCAATATAAG   
rJMSF030O09+          TTTGGCTTATTTGACCACGATTAGTTGTTTTGACCTTGGTTAAACAACCAATATAAGTGT
                      ____________________________________________________________
consensus             TTTGGCTTATTTGACCACGATTAGTTGTTTTGACCTTGGTTAAACAACCAATATAAGTGT