Contig 005726:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF030M10Sequence642005726 (2)dbj|BAO57276.1|2e-65xyloglucan endotransglucosylase/hydrolase [Ipomoea nil]724005726 (2)dbj|BAO57276.1|1e-88xyloglucan endotransglucosylase/hydrolase [Ipomoea nil]

Alignment

This contig is upended


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JMSF030M10-              GGGGGGCTGTGCATTTGGGTTCACAAGCTTTATGCAATTTCTTTCATAGCTAGCCGC
                      ____________________________________________________________
consensus                GGGGGGCTGTGCATTTGGGTTCACAAGCTTTATGCAATTTCTTTCATAGCTAGCCGC
 
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JMSF030M10-           TCTCTCTTCCTCTCCACAAACCCACTATATAATATATATTCTCTTCCACTTTCCTTCAAA
                      ____________________________________________________________
consensus             TCTCTCTTCCTCTCCACAAACCCACTATATAATATATATTCTCTTCCACTTTCCTTCAAA
 
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JMSF030M10-           CCCCATTTCCGCACTCGCCAAAATCTCACAATACCTGCAATGAGAAGGGGGTGTTCAAGA
                      ____________________________________________________________
consensus             CCCCATTTCCGCACTCGCCAAAATCTCACAATACCTGCAATGAGAAGGGGGTGTTCAAGA
 
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JMSF030M10-           ATGCTGGAGGTTCTTGTTATGGTGGCCCTGAGTTCTTGCTTGGCTTCTTCTTCTTACGCT
                      ____________________________________________________________
consensus             ATGCTGGAGGTTCTTGTTATGGTGGCCCTGAGTTCTTGCTTGGCTTCTTCTTCTTACGCT
 
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JMSF030M10-           GCTAACTTCTACCAAGATTTTGATATGACTTGGGGTGGCAATGGCACCAAGATTTCTAAT
                      ____________________________________________________________
consensus             GCTAACTTCTACCAAGATTTTGATATGACTTGGGGTGGCAATGGCACCAAGATTTCTAAT
 
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JMSF030M10-           GGAGGCCAGCTTCTTTCCTTGTCGCTAGACACCACTTCTGGGTCTGCTTTCCGGTCCAAG
rJMSF030M10+                                                                  CAAG
                      ____________________________________________________________
consensus             GGAGGCCAGCTTCTTTCCTTGTCGCTAGACACCACTTCTGGGTCTGCTTTCCGGTCCAAG
 
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JMSF030M10-           AAAGACTTTCTCTTTGGCAGAGTTGAGATGGAGATGAAGCTCGTTCCTGGAAATTCTGCC
rJMSF030M10+          AAAGACTTTCTCTTTGGCAGAGTTGAGATGGAGATGAAGCTCGTTCCTGGAAATTCTGCC
                      ____________________________________________________________
consensus             AAAGACTTTCTCTTTGGCAGAGTTGAGATGGAGATGAAGCTCGTTCCTGGAAATTCTGCC
 
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JMSF030M10-           GGCACTGTTACTGCCTTTTATTTATCTGCTCAAGGACCAACCCATGATGAAATAGATTTT
rJMSF030M10+          GGCACTGTTACTGCCTTTTATTTATCTGCTCAAGGACCAACCCATGATGAAATAGATTTT
                      ____________________________________________________________
consensus             GGCACTGTTACTGCCTTTTATTTATCTGCTCAAGGACCAACCCATGATGAAATAGATTTT
 
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JMSF030M10-           GAGTTCCTCGGAAATGTCACCGGCGAACCTTACGTCCTCCATACCAATGTCATCACTCAG
rJMSF030M10+          GAGTTCCTCGGAAATGTCACCGGCGAACCTTACGTCCTCCATACCAATGTCATCACTCAG
                      ____________________________________________________________
consensus             GAGTTCCTCGGAAATGTCACCGGCGAACCTTACGTCCTCCATACCAATGTCATCACTCAG
 
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JMSF030M10-           GGCAGAGGCGGCAGAGAGCAGCAATTCTACCTATGGTTTGACCCAACCAAGAACTTCCAC
rJMSF030M10+          GGCAGAGGCGGCAGAGAGCAGCAATTCTACCTATGGTTTGACCCAACCAAGAACTTCCAC
                      ____________________________________________________________
consensus             GGCAGAGGCGGCAGAGAGCAGCAATTCTACCTATGGTTTGACCCAACCAAGAACTTCCAC
 
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JMSF030M10-           ACCTACACACTCGTTTGGAAGCCCCAACACATCATTTTTCTGGTG               
rJMSF030M10+          ACCTACACACTCGTTTGGAAGCCCCAACACATCATTTTTCTGGTGGATAAGATTCCCATA
                      ____________________________________________________________
consensus             ACCTACACACTCGTTTGGAAGCCCCAACACATCATTTTTCTGGTGGATAAGATTCCCATA
 
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rJMSF030M10+          AGGGTGTTCAAGAATGATGAAAATTGGGGTGCCATTCCCGAATAATCAGAGCATGAAGGT
                      ____________________________________________________________
consensus             AGGGTGTTCAAGAATGATGAAAATTGGGGTGCCATTCCCGAATAATCAGAGCATGAAGGT
 
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rJMSF030M10+          ATACTCAAGCATATGGAATGCAGAAGCCTGGGCCACAAGGAGTGGGGAAGAAAAGATTGA
                      ____________________________________________________________
consensus             ATACTCAAGCATATGGAATGCAGAAGCCTGGGCCACAAGGAGTGGGGAAGAAAAGATTGA
 
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rJMSF030M10+          CTGGTCCTACGCACCGTTTACAGCTCAGTGCAGAAACTTCCAAGCCAAAACCTTCCCCAG
                      ____________________________________________________________
consensus             CTGGTCCTACGCACCGTTTACAGCTCAGTGCAGAAACTTCCAAGCCAAAACCTTCCCCAG
 
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rJMSF030M10+          TTCTCACCAGTTCACTAATGGAGAATGGGAAAGCCAAGAACTTGATGACCATGGAAAAAG
                      ____________________________________________________________
consensus             TTCTCACCAGTTCACTAATGGAGAATGGGAAAGCCAAGAACTTGATGACCATGGAAAAAG
 
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rJMSF030M10+          CAGGTTGAAATGGATTCAGAAAAAGTTCATGGTCTACAATTATTGCACTGACTTCAAACG
                      ____________________________________________________________
consensus             CAGGTTGAAATGGATTCAGAAAAAGTTCATGGTCTACAATTATTGCACTGACTTCAAACG
 
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rJMSF030M10+          CTTCCCAATGGGCATTCCTGGAGAGTGTAGAATACCCATGTTTTAGTTTTTGATTTAGTT
                      ____________________________________________________________
consensus             CTTCCCAATGGGCATTCCTGGAGAGTGTAGAATACCCATGTTTTAGTTTTTGATTTAGTT
 
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rJMSF030M10+          TTTCCACGAAAAAATTAACATTTATGTAAAAAGAAGAATTGGATCTGTAAAACTGGAATT
                      ____________________________________________________________
consensus             TTTCCACGAAAAAATTAACATTTATGTAAAAAGAAGAATTGGATCTGTAAAACTGGAATT