Contig 005725:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN042A07Sequence504005725 (2)ref|XP_009778344.1|2e-12PREDICTED: ocs element-binding factor 1-like [Nicotiana sylvestris]
JMSF030L22Sequence606016815ref|XP_003544337.1|79.3PREDICTED: uncharacterized protein LOC100799960 [Glycine max] ref|XP_003550394.1674005725 (2)ref|XP_007135953.1|2e-34hypothetical protein PHAVU_009G005800g [Phaseolus vulgaris] gb|AGV54487.1| BZIP

Alignment

This contig is upended


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rJMSF030L22+                                                        AGTCGGCGCGGCGG
                      ____________________________________________________________
consensus                                                           AGTCGGCGCGGCGG
 
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rJMSF030L22+          TCGAGGATGAGGAAACAGAAACATCTGGACGACATGGTGTCGCAGGTTGCGCAGCTGAGG
                      ____________________________________________________________
consensus             TCGAGGATGAGGAAACAGAAACATCTGGACGACATGGTGTCGCAGGTTGCGCAGCTGAGG
 
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rJMSF030L22+          AACGACAACGCCCAGATCCTTAATAACATCAACCACACCACCCAACATTACCTTAACATG
                      ____________________________________________________________
consensus             AACGACAACGCCCAGATCCTTAATAACATCAACCACACCACCCAACATTACCTTAACATG
 
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JMFN042A07+                GGAGAACTCCGTTCTCCGAGCTCAGCTCATGGAGCTCACCCACAGACTGCACTCC
rJMSF030L22+          GAGAGGGAGAACTCCGTTCTCCGAGCTCAGCTCATGGAGCTCACCCACAGACTGCACTCC
                      ____________________________________________________________
consensus             GAGAGGGAGAACTCCGTTCTCCGAGCTCAGCTCATGGAGCTCACCCACAGACTGCACTCC
 
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JMFN042A07+           CTCGACGACATGCTCGCTTCCATAAACTCTGTCTACGGAATCTTTGACTCGCCGGCGCCG
rJMSF030L22+          CTCGACGACATGCTCGCTTCCATAAACTCTGTCTACGGAATCTTTGACTCGCCGGCGCCG
                      ____________________________________________________________
consensus             CTCGACGACATGCTCGCTTCCATAAACTCTGTCTACGGAATCTTTGACTCGCCGGCGCCG
 
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JMFN042A07+           GCGCCGGAGATTCTTACCGCGCCGGAAACTTTCATGACCAATCCTTGGATGTATCTCAAC
rJMSF030L22+          GCGCCGGAGATTCTTACCGCGCCGGAAACTTTCATGACCAATCCTTGGATGTATCTCAAC
                      ____________________________________________________________
consensus             GCGCCGGAGATTCTTACCGCGCCGGAAACTTTCATGACCAATCCTTGGATGTATCTCAAC
 
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JMFN042A07+           CAACCCATCATGGCATCCGCTGATGCAATGTTCCAGTGTTGATTAAAAAGACAATCTTGC
rJMSF030L22+          CAACCCATCATGGCATCCGCTGATGCAATGTTCCAGTGTTGATTAAAAAGACAATCTTGC
                      ____________________________________________________________
consensus             CAACCCATCATGGCATCCGCTGATGCAATGTTCCAGTGTTGATTAAAAAGACAATCTTGC
 
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JMFN042A07+           CCTTGTGGTGCAGACTAAAAAAACAATCATGGGGTGGTGGTAGTTTTTTTTCATTGGTTG
rJMSF030L22+          CCTTGTGGTGCAGACTAAAAAAACAATCATGGGGTGGTGGTAGTTTTTTTTCATTGGTTG
                      ____________________________________________________________
consensus             CCTTGTGGTGCAGACTAAAAAAACAATCATGGGGTGGTGGTAGTTTTTTTTCATTGGTTG
 
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JMFN042A07+           AATGAAAGGAGAGGAGGGGTAAAATGGGAATTATATTAATTATGTCAACTATTATTTGGT
rJMSF030L22+          AATGAAAGGAGAGGAGGGGTAAAATGGGAATTATATTAATTATGTCAACTATTATTTGGT
                      ____________________________________________________________
consensus             AATGAAAGGAGAGGAGGGGTAAAATGGGAATTATATTAATTATGTCAACTATTATTTGGT
 
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JMFN042A07+           TGTTTTCCTAGTAGTATTATATTAGTATAATAATATGATTAGTATAATCTTAATAATTAG
rJMSF030L22+          TGTTTTCCTAGTAGTATTATATTAGTATAATAATATGATTAGTATAATCTTAATAATTAG
                      ____________________________________________________________
consensus             TGTTTTCCTAGTAGTATTATATTAGTATAATAATATGATTAGTATAATCTTAATAATTAG
 
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JMFN042A07+           GTAGTTGAGTCATGAGTATGATTCTCAAGGGGAAGTGGGGAGGGTGTTTTGGTCTTTCTT
rJMSF030L22+          GTAGTTGAGTCATGAGTATGATTCTCAAGGGGAAGTGGGGAGGGTGTTTTGGTCTTTCTT
                      ____________________________________________________________
consensus             GTAGTTGAGTCATGAGTATGATTCTCAAGGGGAAGTGGGGAGGGTGTTTTGGTCTTTCTT
 
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JMFN042A07+           GAAATGTAAATGGATTATATATTATTATT                               
rJMSF030L22+          GAAATGTAAATGGATTATATATTATTATTATTGGCGGTAAGGATGAATGGTTGTGAATGC
                      ____________________________________________________________
consensus             GAAATGTAAATGGATTATATATTATTATTATTGGCGGTAAGGATGAATGGTTGTGAATGC