Contig 005724:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010P06Sequence594012845 (6)gb|ABB54381.2|1e-93FVE [Ipomoea nil]776005724 (6)gb|KCW53598.1|1e-112hypothetical protein EUGRSUZ_J02866 [Eucalyptus grandis]
JMFF041E02Sequence644012845 (6)ref|XP_010242216.1|4e-113PREDICTED: WD-40 repeat-containing protein MSI4-like [Nelumbo nucifera]614005724 (6)ref|XP_009762754.1|3e-71PREDICTED: WD-40 repeat-containing protein MSI4-like, partial [Nicotiana sylves
JMFF046K13Sequence618012845 (6)ref|XP_008228297.1|6e-111PREDICTED: WD-40 repeat-containing protein MSI4-like [Prunus mume]535005724 (6)gb|KCW53598.1|4e-54hypothetical protein EUGRSUZ_J02866 [Eucalyptus grandis]
JMFF049E05Sequence529012845 (6)gb|ABB54381.2|4e-93FVE [Ipomoea nil]540005724 (6)gb|KCW53598.1|2e-43hypothetical protein EUGRSUZ_J02866 [Eucalyptus grandis]
JMSF030J04Sequence654012845 (6)ref|XP_010242216.1|7e-115PREDICTED: WD-40 repeat-containing protein MSI4-like [Nelumbo nucifera]738005724 (6)gb|KCW53598.1|3e-80hypothetical protein EUGRSUZ_J02866 [Eucalyptus grandis]
JMSF034K08Sequence676012845 (6)ref|XP_010242216.1|3e-124PREDICTED: WD-40 repeat-containing protein MSI4-like [Nelumbo nucifera]782005724 (6)gb|KCW53598.1|3e-115hypothetical protein EUGRSUZ_J02866 [Eucalyptus grandis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF034K08+ GGCATGAGGATACT
                      ____________________________________________________________
consensus GGCATGAGGATACT
 
. : . : . : . : . : . :
rJMSF034K08+ GNTGAAGACGTTCAGTTTGCCCTTCAAGTGCACAGGAGTTCTGTAGTGTTGGTGATGATT
rJMFF010P06+ CAAGTGCACAGGAGTTCTGTAGTGTTGGTGATGATT
                      ____________________________________________________________
consensus GNTGAAGACGTTCAGTTTGCCCTTCAAGTGCACAGGAGTTCTGTAGTGTTGGTGATGATT
 
. : . : . : . : . : . :
rJMSF034K08+ CATGCTTAATATTGTGGGATGCAAGACGAGGTTCAGCTCCCGTCATGAAGGTTGAGAAGG
rJMFF010P06+ CATGCTTAATATTGTGGGATGCAAGACGAGGTTCAGCTCCCGTCATGAAGGTTGAGAAGG
                      ____________________________________________________________
consensus CATGCTTAATATTGTGGGATGCAAGACGAGGTTCAGCTCCCGTCATGAAGGTTGAGAAGG
 
. : . : . : . : . : . :
rJMSF034K08+ CTCACAGTGCTGATCTCCATTGTGTTGATTGGAATCCATTTGATGTAAATCTTATCTTGA
rJMFF010P06+ CTCACAGTGCTGATCTCCATTGTGTTGATTGGAATCCATTTGATGTAAATCTTATCTTGA
rJMSF030J04+ GATGTAAATCTTATCTTGA
                      ____________________________________________________________
consensus CTCACAGTGCTGATCTCCATTGTGTTGATTGGAATCCATTTGATGTAAATCTTATCTTGA
 
. : . : . : . : . : . :
rJMSF034K08+ CTGGGTCTGCTGATAACACCGTCCGTATGTTTGACCGCCGTAAACTCACTTCTGGAGGAG
rJMFF010P06+ CTGGGTCTGCTGATAACACCGTCCGTATGTTTGACCGCCGTAAACTCACTTCTGGAGGAG
rJMFF041E02+ CGTCCGTATGTTTGACCGCCGTAAACTCACTTCTGGAGGAG
rJMSF030J04+ CTGGGTCTGCTGATAACACCGTCCGTATGTTTGACCGCCGTAAACTCACTTCTGGAGGAG
                      ____________________________________________________________
consensus CTGGGTCTGCTGATAACACCGTCCGTATGTTTGACCGCCGTAAACTCACTTCTGGAGGAG
 
. : . : . : . : . : . :
rJMSF034K08+ TAGGTTCTCCTATCCACATATTTGAAGGTCATTCTGCTGCTGTTCTATGTGTCCAGTGGT
rJMFF010P06+ TAGGTTCTCCTATCCACATATTTGAAGGTCATTCTGCTGCTGTTCTATGTGTCCAGTGGT
rJMFF041E02+ TAGGTTCTCCTATCCACATATTTGAAGGTCATTCTGCTGCTGTTCTATGTGTCCAGTGGT
rJMFF046K13+ TGCTGCTGTTCTATGTGTCCAGTGGT
rJMSF030J04+ TAGGTTCTCCTATCCACATATTTGAAGGTCATTCTGCTGCTGTTCTATGTGTCCAGTGGT
                      ____________________________________________________________
consensus TAGGTTCTCCTATCCACATATTTGAAGGTCATTCTGCTGCTGTTCTATGTGTCCAGTGGT
 
. : . : . : . : . : . :
rJMSF034K08+ CTCCAGACAAGTCATCTGTCTTCGGAAGTTCTGCTGAGGATGGTATCTTGAATATCTGGG
rJMFF010P06+ CTCCAGACAAGTCATCTGTCTTCGGAAGTTCTGCTGAGGATGGTATCTTGAATATCTGGG
rJMFF041E02+ CTCCAGACAAGTCATCTGTCTTCGGAAGTTCTGCTGAGGATGGTATCTTGAATATCTGGG
rJMFF046K13+ CTCCAGACAAGTCATCTGTCTTCGGAAGTTCTGCTGAGGATGGTATCTTGAATATCTGGG
rJMFF049E05+ GTCATCTGTCTTCGGAAGTTCTGCTGAGGATGGTATCTTGAATATCTGGG
rJMSF030J04+ CTCCAGACAAGTCATCTGTCTTCGGAAGTTCTGCTGAGGATGGTATCTTGAATATCTGGG
                      ____________________________________________________________
consensus CTCCAGACAAGTCATCTGTCTTCGGAAGTTCTGCTGAGGATGGTATCTTGAATATCTGGG
 
. : . : . : . : . : . :
rJMSF034K08+ ATCATGAAAAGATTGGTAAGGAGGATCCTGGGAAAAAACCTCCAAATTCCCCTCAAGGCT
rJMFF010P06+ ATCATGAAAAGATTGGTAAGGAGGATCCTGGGAAAAAACCTCCAAATTCCCCTCAAGGCT
rJMFF041E02+ ATCATGAAAAGATTGGTAAGGAGGATCCTGGGAAAAAACCTCCAAATTCCCCTCAAGGCT
rJMFF046K13+ ATCATGAAAAGATTGGTAAGGAGGATCCTGGGAAAAAACCTCCAAATTCCCCTCAAGGCT
rJMFF049E05+ ATCATGAAAAGATTGGTAAGGAGGATCCTGNGAAAAAACCTCCAAATTCCCCTCAAGGCT
rJMSF030J04+ ATCATGAAAAGATTGGTAAGGAGGATCCTGGGAAAAAACCTCCAAATTCCCCTCAAGGCT
                      ____________________________________________________________
consensus ATCATGAAAAGATTGGTAAGGAGGATCCTGGGAAAAAACCTCCAAATTCCCCTCAAGGCT
 
. : . : . : . : . : . :
rJMSF034K08+ TGTTTTTCCGTCATGCTGGACACAGGGATAAGGTGGTTGACTTCCATTGGAATGCATCAG
rJMFF010P06+ TGTTTTTCCGTCATGCTGGACACAGGGATAAGGTGGTTGACTTCCATTGGAATGCATCAG
rJMFF041E02+ TGTTTTTCCGTCATGCTGGACACAGGGATAAGGTGGTTGACTTCCATTGGAATGCATCAG
rJMFF046K13+ TGTTTTTCCGTCATGCTGGACACAGGGATAAGGTGGTTGACTTCCATTGGAATGCATCAG
rJMFF049E05+ TGTTTTTCCGTCATGCTGGACACAGGGATAAGGTGGTTGACTTCCATTGGAATGCATCAG
rJMSF030J04+ TGTTTTTCCGTCATGCTGGACACAGGGATAAGGTGGTTGACTTCCATTGGAATGCATCAG
                      ____________________________________________________________
consensus TGTTTTTCCGTCATGCTGGACACAGGGATAAGGTGGTTGACTTCCATTGGAATGCATCAG
 
. : . : . : . : . : . :
rJMSF034K08+ ACCCGTGGACAATTGTTAGCGTCTCTGATGATGGTGAAAGCACTGGTGGAGGTGGCACTT
rJMFF010P06+ ACCCGTGGACAATTGTTAGCGTCTCTGATGATGGTGAAAGCACTGGTGGAGGTGGCACTT
rJMFF041E02+ ACCCGTGGACAATTGTTAGCGTCTCTGATGATGGTGAAAGCACTGGTGGAGGTGGCACTT
rJMFF046K13+ ACCCGTGGACAATTGTTAGCGTCTCTGATGATGGTGAAAGCACTGGTGGAGGTGGCACTT
rJMFF049E05+ ACCCGTGGACAATTGTTAGCGTCTCTGATGATGGTGAAAGCACTGGTGGAGGTGGCACTT
rJMSF030J04+ ACCCGTGGACAATTGTTAGCGTCTCTGATGATGGTGAAAGCACTGGTGGAGGTGGCACTT
                      ____________________________________________________________
consensus ACCCGTGGACAATTGTTAGCGTCTCTGATGATGGTGAAAGCACTGGTGGAGGTGGCACTT
 
. : . : . : . : . : . :
rJMSF034K08+ TGCAGATATGGAGAATGATGGACATCATTTATAGGCCACAGGATGAGGTTATTACTGAGC
rJMFF010P06+ TGCAGATATGGAGAATGATGGACATCATTTATAGGCCACAGGATGAGGTTATTACTGAGC
rJMFF041E02+ TGCAGATATGGAGAATGATGGACATCATTTATAGGCCACAGGATGAGGTTATTACTGAGC
rJMFF046K13+ TGCAGATATGGAGAATGATGGACATCATTTATAGGCCACAGGATGAGGTTATTACTGAGC
rJMFF049E05+ TGCAGATATGGAGAATGATGGACATCATTTATAGGCCACAGGATGAGGTTATTACTGAGC
rJMSF030J04+ TGCAGATATGGAGAATGATGGACATCATTTATAGGCCACAGGATGAGGTTATTACTGAGC
                      ____________________________________________________________
consensus TGCAGATATGGAGAATGATGGACATCATTTATAGGCCACAGGATGAGGTTATTACTGAGC
 
. : . : . : . : . : . :
rJMSF034K08+ TGGAGAAGTTCAAATCTCACCTGCTGACTTGCTCTTAATTTCGCCTACTTCTCTCCAGGG
rJMFF010P06+ TGGAGAAGTTCAAATCTCACCTGCTGACTTGCTCTTAATTTCGCCTACTTCTCTCCAGGG
rJMFF041E02+ TGGAGAAGTTCAAATCTCACCTGCTGACTTGCTCTTAATTTCGCCTACTTCTCTCCAGGG
rJMFF046K13+ TGGAGAAGTTCAAATCTCACCTGCTGACTTGCTCTTAATTTCGCCTACTTCTCTCCAGGG
rJMFF049E05+ TGGAGAAGTTCAAATCTCACCTGCTGACTTGCTCTTAATTTCGCCTACTTCTCTCCAGGG
rJMSF030J04+ TGGAGAAGTTCAAATCTCACCTGCTGACTTGCTCTTAATTTCGCCTACTTCTCTCCAGGG
                      ____________________________________________________________
consensus TGGAGAAGTTCAAATCTCACCTGCTGACTTGCTCTTAATTTCGCCTACTTCTCTCCAGGG
 
. : . : . : . : . : . :
rJMSF034K08+ ATGAAAACTTGTAATTTATTTGGCTGATTTCAGATTCCTTAGTAAACTATATAACCCTTG
rJMFF010P06+ ATGAAAACTTGTAATTTATTTGGCTGATTTCAGATTCCTTAGTAAACTATATAA-CCTTG
rJMFF041E02+ ATGAAAACTTGTAATTTATTTGGCTGATTTCAGATTCCTTAGTAAACTATATAA-CCTTG
rJMFF046K13+ ATGAAAACTTGTAATTTATTTGGCTGATTTCAGATTCCTTAGTAAACTATATAA-CCTTG
rJMFF049E05+ ATGAAAACTTGTAATTTATTTGGCTGATTTCAGATTCCTTAGTAAACTATATAA-CCTTG
rJMSF030J04+ ATGAAAACTTGTAATTTATTTGGCTGATTTCAGATTCCTTAGTAAACTATATAA-CCTTG
                      ____________________________________________________________
consensus ATGAAAACTTGTAATTTATTTGGCTGATTTCAGATTCCTTAGTAAACTATATAA-CCTTG
 
. : . : . : . : . : . :
rJMSF034K08+ GGGATTTATCTGTTCTGTAATCTCTAGATTCGAGACCTATCTACAAT
rJMFF010P06+ GGGATTTATCTGTTCTGTAATCTCTAGATTCGAGACCTATCTACAATTGAACTCCTATAA
rJMFF041E02+ GGGATTTATCTGTTCTGTAATCTCTAGATTCGAGACCTATCTACAATTGAACTCCTATAA
rJMFF046K13+ GGGATTTATCTGTTCTGTAATCTCTAGATTCGAGACCTATCTACAATTGAACTCCTATAA
rJMFF049E05+ GGGATTTATCTGTTCTGTAATCTCTAGATTCGAGACCTATCTACAATTGAACTCCTATAA
rJMSF030J04+ GGGATTTATCTGTTCTGTAATCTCTAGATTCGAGACCTATCTACAATTGAACTCCTATAA
                      ____________________________________________________________
consensus GGGATTTATCTGTTCTGTAATCTCTAGATTCGAGACCTATCTACAATTGAACTCCTATAA
 
. : . : . : . : . : . :
rJMFF010P06+ TGCCCTTATAATACAAGTCAA
rJMFF041E02+ TGCCCTTATAATACAAGTCAAGTTTCTAGC
rJMFF046K13+ TGCCCTTATAATACAAGTCAAGTTTCTAGC
rJMFF049E05+ TGCCCTTATAATACAAGTCAAGTTTCTAGCAAA
rJMSF030J04+ TGCCCTTATAATACAAGTCAAGTTTCTAGCAAATTGGATGGCTAGCGAAGTAGCAAGTTG
                      ____________________________________________________________
consensus TGCCCTTATAATACAAGTCAAGTTTCTAGCAAATTGGATGGCTAGCGAAGTAGCAAGTTG
 
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rJMSF030J04+ GTTTCTTGGGTTCAACACTGTAACAATTATATTGTGTGGGGTGGAGATTGCTGATCGCCA
                      ____________________________________________________________
consensus GTTTCTTGGGTTCAACACTGTAACAATTATATTGTGTGGGGTGGAGATTGCTGATCGCCA