Contig 005721:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF046H06+                                                            ATTGTAGCGC
                      ____________________________________________________________
consensus                                                               ATTGTAGCGC
 
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rJMSF046H06+          ATCCACAAGAGCCCAACCAACTTGCATTTGGATTGACAGATGGGTCTATTAAAGTTATTG
                      ____________________________________________________________
consensus             ATCCACAAGAGCCCAACCAACTTGCATTTGGATTGACAGATGGGTCTATTAAAGTTATTG
 
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rJMSF046H06+          AACCATTGGAATCCGGAGGGGAGTGGGGAATATCTAGACATAGCCAAGATAAGATCGTGG
rJMSF030F23+                                          TCTAGACATAGCCAAGATAAGATCGTGG
                      ____________________________________________________________
consensus             AACCATTGGAATCCGGAGGGGAGTGGGGAATATCTAGACATAGCCAAGATAAGATCGTGG
 
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rJMSF046H06+          CTGAATAGAGGACTCGAGATAGCTTCGCAATGTCTGGCAATCCGTGTAGATTTGGACCGA
rJMSF030F23+          CTGAATAGAGGACTCGAGATAGCTTCGCAATGTCTGGCAATCCGTGTAGATTTGGACCGA
                      ____________________________________________________________
consensus             CTGAATAGAGGACTCGAGATAGCTTCGCAATGTCTGGCAATCCGTGTAGATTTGGACCGA
 
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rJMSF046H06+          TTCTTCTCCTCGCTGTTTGAGCCATGATAAAGCTTCCTTACATGCTAGAGTCTCAGCCAT
rJMSF030F23+          TTCTTCTCCTCGCTGTTTGAGCCATGATAAAGCTTCCTTACATGCTAGAGTCTCAGCCAT
                      ____________________________________________________________
consensus             TTCTTCTCCTCGCTGTTTGAGCCATGATAAAGCTTCCTTACATGCTAGAGTCTCAGCCAT
 
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rJMSF046H06+          AAGGGGTGAGAAACAAGTTTGTGGTGGCACGCAGTAGGCCGATACATAAGCTCCAATATG
rJMSF030F23+          AAGGGGTGAGAAACAAGTTTGTGGTGGCACGCAGTAGGCCGATACATAAGCTCCAATATG
                      ____________________________________________________________
consensus             AAGGGGTGAGAAACAAGTTTGTGGTGGCACGCAGTAGGCCGATACATAAGCTCCAATATG
 
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rJMSF046H06+          GTCTCGTAATAGAACTCCGGTTGTAGCTTTCATCAAGACGGCATCGTATCCTGCATCTAT
rJMSF030F23+          GTCTCGTAATAGAACTCCGGTTGTAGCTTTCATCAAGACGGCATCGTATCCTGCATCTAT
                      ____________________________________________________________
consensus             GTCTCGTAATAGAACTCCGGTTGTAGCTTTCATCAAGACGGCATCGTATCCTGCATCTAT
 
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rJMSF046H06+          AAAGCATTGTTTCGGATATATAGGGCCGTCCGGCAGTAGTGTTGACGTGGGCGGGGCTGG
rJMSF030F23+          AAAGCATTGTTTCGGATATATAGGGCCGTCCGGCAGTAGTGTTGACGTGGGCGGGGCTGG
                      ____________________________________________________________
consensus             AAAGCATTGTTTCGGATATATAGGGCCGTCCGGCAGTAGTGTTGACGTGGGCGGGGCTGG
 
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rJMSF046H06+          CACGGCAGTGGTGGCAATAGCGGAGACCGGCAGTATCGCAGTAGGCGCTACTGTTGACGT
rJMSF030F23+          CACGGCAGTGGTGGCAATAGCGGAGACCGGCAGTATCGCAGTAGGCGCTACTGTTGACGT
                      ____________________________________________________________
consensus             CACGGCAGTGGTGGCAATAGCGGAGACCGGCAGTATCGCAGTAGGCGCTACTGTTGACGT
 
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rJMSF046H06+          CGGCAGGGCTGGGACGGCGTTGGCGGCAGTAACGGAGGCCGGCAGTATCCCGGCAGCATG
rJMSF030F23+          CGGCAGGGCTGGGACGGCGTTGGCGGCAGTAACGGAGGCCGGCAGTATCCCGGCAGCATG
                      ____________________________________________________________
consensus             CGGCAGGGCTGGGACGGCGTTGGCGGCAGTAACGGAGGCCGGCAGTATCCCGGCAGCATG
 
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rJMSF046H06+          GTGTGTGGCAGTGGGCATCTCGGTCGGCAGTGCTACCGGCGGTTGTTTGGCATGTAGTGA
rJMSF030F23+          GTGTGTGGCAGTGGGCATCTCGGTCGGCAGTGCTACCGGCGGTTGTTTGGCATGTAGTGA
                      ____________________________________________________________
consensus             GTGTGTGGCAGTGGGCATCTCGGTCGGCAGTGCTACCGGCGGTTGTTTGGCATGTAGTGA
 
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rJMSF046H06+          TTGCCATGTATTCTTCATAGATAGAGTTGCTAATACAACCCTCTTTGGTAATTGTAGGCT
rJMSF030F23+          TTGCCATGTATTCTTCATAGATAGAGTTGCTAATACAACCCTCTTTGGTAATTGTAGGCT
                      ____________________________________________________________
consensus             TTGCCATGTATTCTTCATAGATAGAGTTGCTAATACAACCCTCTTTGGTAATTGTAGGCT
 
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rJMSF046H06+          TGCATCCCATACCGCTCCGTTTCGGGCTCTCCAAATATTGTATAAAATTCCAGCTGCAAA
rJMSF030F23+          TGCATCCCATACCGCTCCGTTTCGGGCTCTCCAAATATTGTATAAAATTCCAGCTGCAAA
                      ____________________________________________________________
consensus             TGCATCCCATACCGCTCCGTTTCGGGCTCTCCAAATATTGTATAAAATTCCAGCTGCAAA
 
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rJMSF046H06+          CAACATTTCATTAGAGTCTAGAACATTCATAATTGTCCTAAACCATTCATGAAAAATAT 
rJMSF030F23+          CAACATTTCATTAGAGTCTAGAACATTCATAATTGTCCTAAACCATTCATGAAAAATATT
                      ____________________________________________________________
consensus             CAACATTTCATTAGAGTCTAGAACATTCATAATTGTCCTAAACCATTCATGAAAAATATT