Contig 005718:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013L03Sequence602005718 (2)ref|XP_007020632.1|2e-37Calcium-dependent lipid-binding family protein isoform 1 [Theobroma cacao] ref|
JMSF029N22Sequence647016811ref|XP_002274753.1|256PREDICTED: uncharacterized protein LOC100262283 [Vitis vinifera] ref|XP_01064451644005718 (2)ref|XP_009598277.1|115PREDICTED: uncharacterized protein LOC104094118 [Nicotiana tomentosiformis] ref|

Alignment

This contig is upended


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JMFF013L03+                                    AGTGTGTGAAAATGATTTGATGGTTTCTGAGTATT
                      ____________________________________________________________
consensus                                      AGTGTGTGAAAATGATTTGATGGTTTCTGAGTATT
 
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JMFF013L03+           ATGGCATTCAAAGTTCGAACCTAGAAACCCAAAGCTCAGATAGCTTGGTCTCTTCCGACA
                      ____________________________________________________________
consensus             ATGGCATTCAAAGTTCGAACCTAGAAACCCAAAGCTCAGATAGCTTGGTCTCTTCCGACA
 
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JMFF013L03+           CTGAGAATCAGCCCGGTTCAGATGTTAATGTCGAGGAGATTCTTCCAGCTGGACCGGATT
rJMSF029N22+                          TTCAGATGTTAATGTCGAGGAGATTCTTCCAGCTGGACCGGATT
                      ____________________________________________________________
consensus             CTGAGAATCAGCCCGGTTCAGATGTTAATGTCGAGGAGATTCTTCCAGCTGGACCGGATT
 
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JMFF013L03+           CCCACCATTATAAAAAGCAAGATTCCCCACCAAGCAGTGTGTCAACCAACGAGTCCCCAT
rJMSF029N22+          CCCACCATTATAAAAAGCAAGATTCCCCACCCAGCAGTGTGTCAACCAACGAGTCCCCAT
                      ____________________________________________________________
consensus             CCCACCATTATAAAAAGCAAGATTCCCCACCCAGCAGTGTGTCAACCAACGAGTCCCCAT
 
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JMFF013L03+           TGGCTTCACTTCCCGCAAGTTCTCAGTCTTCTGCAACTCCACAAGGTTCGAAGTTTCCAA
rJMSF029N22+          TGGCTTCACTTCCCGCAAGTTCTCAGTCTTCTGCAACTCCACAAGGTTCGAAGTTTCCAA
                      ____________________________________________________________
consensus             TGGCTTCACTTCCCGCAAGTTCTCAGTCTTCTGCAACTCCACAAGGTTCGAAGTTTCCAA
 
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JMFF013L03+           ATGACGAGTACGTTTCACCCCCTAAGGAATGCCCCGAAGAGAAGAAGTTAGAAACGAAGC
rJMSF029N22+          ATGACGAGTACGTTTCACCCCCTAAGGAATGCCCCGAAGAGAAGAAGTTAGAAACGAAGC
                      ____________________________________________________________
consensus             ATGACGAGTACGTTTCACCCCCTAAGGAATGCCCCGAAGAGAAGAAGTTAGAAACGAAGC
 
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JMFF013L03+           CACTTGTCACAGTAAACATCGAGCCAGAGCCACAGGTGGTGCAGCAGGACATTGTGGATA
rJMSF029N22+          CACTTGTCACAGTAAACATCGAGCCAGAGCCACAGGTGGTGCAGCAGGACATTGTGGATA
                      ____________________________________________________________
consensus             CACTTGTCACAGTAAACATCGAGCCAGAGCCACAGGTGGTGCAGCAGGACATTGTGGATA
 
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JMFF013L03+           TGTACATGAAAAGCATGCAGCAATTTACCGAGTCATTGGCAAAGATGAAGCTTCCACTCG
rJMSF029N22+          TGTACATGAAAAGCATGCAGCAATTTACCGAGTCATTGGCAAAGATGAAGCTTCCACTCG
                      ____________________________________________________________
consensus             TGTACATGAAAAGCATGCAGCAATTTACCGAGTCATTGGCAAAGATGAAGCTTCCACTCG
 
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JMFF013L03+           ACATCGATAGTGGAACAACCAGTTCCGGGAATTCAACTTCGGAGAAATCTCAAACTCCGA
rJMSF029N22+          ACATCGATAGTGGAACAACCAGTTCCGGGAATTCAACTTCGGAGAAATCTCAAACTCCGA
                      ____________________________________________________________
consensus             ACATCGATAGTGGAACAACCAGTTCCGGGAATTCAACTTCGGAGAAATCTCAAACTCCGA
 
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JMFF013L03+           AGAGTGCAGGCTCAAGAGTGTTCTATGGGAGCAGGGCTTTCTTCTGACTTCTGAGCTTGT
rJMSF029N22+          AGAGTGCAGGCTCAAGAGTGTTCTATGGGAGCAGGGCTTTCTTCTGACTTCTGAGCTTGT
                      ____________________________________________________________
consensus             AGAGTGCAGGCTCAAGAGTGTTCTATGGGAGCAGGGCTTTCTTCTGACTTCTGAGCTTGT
 
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JMFF013L03+           GTTTTACTGGTTTATGCAAACAAGTGA                                 
rJMSF029N22+          GTTTTACTGGTTTATGCAAACAAGTGACTCGAGCAATTAGGATGAAACTGATGTTATTAG
                      ____________________________________________________________
consensus             GTTTTACTGGTTTATGCAAACAAGTGACTCGAGCAATTAGGATGAAACTGATGTTATTAG
 
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rJMSF029N22+          TAACATGAAGTCTTCTAAGAAGTGTGGTTTTACTTAATTTATGTTGAATGTTTTAGAGAT
                      ____________________________________________________________
consensus             TAACATGAAGTCTTCTAAGAAGTGTGGTTTTACTTAATTTATGTTGAATGTTTTAGAGAT
 
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rJMSF029N22+          AGAACCATTGTCATAACATGTATGTTGTAGTGTTGTACAACCTTTGTTTCATTGCAGATG
                      ____________________________________________________________
consensus             AGAACCATTGTCATAACATGTATGTTGTAGTGTTGTACAACCTTTGTTTCATTGCAGATG