Contig 005716:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013N19Sequence464009396 (6)ref|XP_009758434.1|6e-07PREDICTED: dof zinc finger protein DOF2.1-like isoform X1 [Nicotiana sylvestris694005716 (4)ref|XP_009598584.1|4e-12PREDICTED: dof zinc finger protein DOF2.1-like [Nicotiana tomentosiformis]
JMSF017M07Sequence446009396 (6)708005716 (4)ref|XP_009598584.1|3e-12PREDICTED: dof zinc finger protein DOF2.1-like [Nicotiana tomentosiformis]
JMSF028P05Sequence659009396 (6)ref|XP_009598584.1|1e-50PREDICTED: dof zinc finger protein DOF2.1-like [Nicotiana tomentosiformis]670005716 (4)ref|XP_009598584.1|3e-19PREDICTED: dof zinc finger protein DOF2.1-like [Nicotiana tomentosiformis]
JMSF029J09Sequence599009396 (6)ref|XP_009758434.1|2e-42PREDICTED: dof zinc finger protein DOF2.1-like isoform X1 [Nicotiana sylvestris672005716 (4)ref|XP_009598584.1|1e-08PREDICTED: dof zinc finger protein DOF2.1-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF028P05+ GGGCCTCACATTCGCGAGCTTGCAGAAACAAGCGGATGGGAATCTAGGGTTGGAA
                      ____________________________________________________________
consensus GGGCCTCACATTCGCGAGCTTGCAGAAACAAGCGGATGGGAATCTAGGGTTGGAA
 
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rJMSF028P05+ GACCACGACATGGCGGCGGCGCCGATGATGTGTAATCCCAATAATACCCTCTCTGATGTT
                      ____________________________________________________________
consensus GACCACGACATGGCGGCGGCGCCGATGATGTGTAATCCCAATAATACCCTCTCTGATGTT
 
. : . : . : . : . : . :
rJMSF028P05+ CTTGGAAACTACGGCGCCGCCTCAGCCACCCCACACGGCTTTCTTGATTCCCTTAGGGGT
rJMSF013N19+ CTCAGCCACCCCACACGGCTTTCTTGATTCCCTTAGGGGT
rJMSF017M07+ GGCGCCGCCTCAGCCACCCCACACGGCTTTCTTGATTCCCTTAGGGGT
rJMSF029J09+ TCCCTTAGGGGT
                      ____________________________________________________________
consensus CTTGGAAACTACGGCGCCGCCTCAGCCACCCCACACGGCTTTCTTGATTCCCTTAGGGGT
 
. : . : . : . : . : . :
rJMSF028P05+ ACCGGATTCCTCGAACCCCCAACAAACGGATTATTGTACCACAACAACAGCTTGCAGTAC
rJMSF013N19+ ACCGGATTCCTCGAACCCCCAACAAACGGATTATTGTACCACAACAACAGCTTGCAGTAC
rJMSF017M07+ ACCGGATTCCTCGAACCCCCAACAAACGGATTATTGTACCACAACAACAGCTTGCAGTAC
rJMSF029J09+ ACCGGATTCCTCGAACCCCCAACAAACGGATTATTGTACCACAACAACAGCTTGCAGTAC
                      ____________________________________________________________
consensus ACCGGATTCCTCGAACCCCCAACAAACGGATTATTGTACCACAACAACAGCTTGCAGTAC
 
. : . : . : . : . : . :
rJMSF028P05+ TACGGGGCTGTGGGGGAAATGGGAATGCCGCCGTACGATGTTCACATGGGTGGTGGGGTG
rJMSF013N19+ TACGGGGCTGTGGGGGAAATGGGAATGCCGCCGTACGATGTTCACATGGGTGGTGGGGTG
rJMSF017M07+ TACGGGGCTGTGGGGGAAATGGGAATGCCGCCGTACGATGTTCACATGGGTGGTGGGGTG
rJMSF029J09+ TACGGGGCTGTGGGGGAAATGGGAATGCCGCCGTACGATGTTCACATGGGTGGTGGGGTG
                      ____________________________________________________________
consensus TACGGGGCTGTGGGGGAAATGGGAATGCCGCCGTACGATGTTCACATGGGTGGTGGGGTG
 
. : . : . : . : . : . :
rJMSF028P05+ TCCACGTCAGCTGCCGTGAAGCAAGAGATGTATAGTAATGGAAGAGATAATAATGAAGGT
rJMSF013N19+ TCCACGTCAGCTGCCGTGAAGCAAGAGATGTATAGTAATGGAAGAGATAATAATGAAGGT
rJMSF017M07+ TCCACGTCAGCTGCCGTGAAGCAAGAGATGTATAGTAATGGAAGAGATAATAATGAAGGT
rJMSF029J09+ TCCACGTCAGCTGCCGTGAAGCAAGAGATGTATAGTAATGGAAGAGATAATAATGAAGGT
                      ____________________________________________________________
consensus TCCACGTCAGCTGCCGTGAAGCAAGAGATGTATAGTAATGGAAGAGATAATAATGAAGGT
 
. : . : . : . : . : . :
rJMSF028P05+ GATGATGACAACAGGGTATTATGGGGATTTCCATGGCAACATGGAGGAGAAGGGAACATG
rJMSF013N19+ GATGATGACAACAGGGTATTATGGGGATTTCCATGGCAACATGGAGGAGAAGGGAACATG
rJMSF017M07+ GATGATGACAACAGGGTATTATGGGGATTTCCATGGCAACATGGAGGAGAAGGGAACATG
rJMSF029J09+ GATGATGACAACAGGGTATTATGGGGATTTCCATGGCAACATGGAGGAGAAGGGAACATG
                      ____________________________________________________________
consensus GATGATGACAACAGGGTATTATGGGGATTTCCATGGCAACATGGAGGAGAAGGGAACATG
 
. : . : . : . : . : . :
rJMSF028P05+ AACATGGTTGTTGTTAATGATGTTGATTCAAGCAGACAAAACAGCTGCAATATTGGGTTT
rJMSF013N19+ AACATGGTTGTTGTTAATGATGTTGATTCAAGCAGACAAAACAGCTGCAATATTGGGTTT
rJMSF017M07+ AACATGGTTGTTGTTAATGATGTTGATTCAAGCAGACAAAACAGCTGCAATATTGGGTTT
rJMSF029J09+ AACATGGTTGTTGTTAATGATGTTGATTCAAGCAGACAAAACAGCTGCAATATTGGGTTT
                      ____________________________________________________________
consensus AACATGGTTGTTGTTAATGATGTTGATTCAAGCAGACAAAACAGCTGCAATATTGGGTTT
 
. : . : . : . : . : . :
rJMSF028P05+ GGTTCTTCTTGGCATGGCCTTGTCAACAGCCCTCTCATGTAGAGTTTCATCATTACAACC
rJMSF013N19+ GGTTCTTCTTGGCATGGCCTTGTCAACAGCCCTCTCATGTAGAGTTTCATCATTACAACC
rJMSF017M07+ GGTTCTTCTTGGCATGGCCTTGTCAACAGCCCTCTCATGTAGAGTTTCATCATTACAACC
rJMSF029J09+ GGTTCTTCTTGGCATGGCCTTGTCAACAGCCCTCTCATGTAGAGTTTCATCATTACAACC
                      ____________________________________________________________
consensus GGTTCTTCTTGGCATGGCCTTGTCAACAGCCCTCTCATGTAGAGTTTCATCATTACAACC
 
. : . : . : . : . : . :
rJMSF028P05+ CCTTCAGATCTTTCGGTTTTTGTTGCATACTGAACTGGTATCTGTATCCCCGCAAATATT
rJMSF013N19+ CCTTCAGATCTTTCGGTTTTTGTTGCATACTGAACTGGTATCTGTATCCCCGCAAATATT
rJMSF017M07+ CCTTCAGATCTTTCGGTTTTTGTTGCATACTGAACTGGTATCTGTATCCCCGCAAATATT
rJMSF029J09+ CCTTCAGATCTTTCGGTTTTTGTTGCATACTGAACTGGTATCTGTATCCCCGCAAATATT
                      ____________________________________________________________
consensus CCTTCAGATCTTTCGGTTTTTGTTGCATACTGAACTGGTATCTGTATCCCCGCAAATATT
 
. : . : . : . : . : . :
rJMSF028P05+ TCAGTTCAAATCTTCGGTTTTTGTTGCATACTGAACTGGTATCTGCATCCCGCAAACTTC
rJMSF013N19+ TCAGTTCAAATCTTCGGTTTTTGTTGCATACTGAACTGGTATCTGCATCCCGCAAACTTC
rJMSF017M07+ TCAGTTCAAATCTTCGGTTTTTGTTGCATACTGAACTGGTATCTGCATCCCGCAAACTTC
rJMSF029J09+ TCAGTTCAAATCTTCGGTTTTTGTTGCATACTGAACTGGTATCTGCATCCCGCAAACTTC
                      ____________________________________________________________
consensus TCAGTTCAAATCTTCGGTTTTTGTTGCATACTGAACTGGTATCTGCATCCCGCAAACTTC
 
. : . : . : . : . : . :
rJMSF028P05+ TGGCCCGAAATCCT
rJMSF013N19+ TGGCCCGAAATCCTTCTTCTTCAATCTCAAGGAAAGTGTGACATATTTCCATACATGGTA
rJMSF017M07+ TGGCCCGAAATCCTTCTTCTTCAATCTCAAGGAAAGTGTGACATATTTCCATACATGGTA
rJMSF029J09+ TGGCCCGAAATCCTTCTTCTTCAATCTCAAGGAAAGTGTGACATATTTCCATACATGGTA
                      ____________________________________________________________
consensus TGGCCCGAAATCCTTCTTCTTCAATCTCAAGGAAAGTGTGACATATTTCCATACATGGTA
 
. : . : . : . : . : . :
rJMSF013N19+ TACCCTGCTATTGAGAATCTGAAAATGTGAACATGTTACATGCATGTGTCTGAAGACTAG
rJMSF017M07+ TACCCTGCTATTGAGAATCTGAAAATGTGAACATGTTACATGCATGTGTCTGAAGACTAG
rJMSF029J09+ TACCCTGCTATTGAGAATCTGAAAATGTGAACATGTTACATGCATGTGTCTGAAGACTAG
                      ____________________________________________________________
consensus TACCCTGCTATTGAGAATCTGAAAATGTGAACATGTTACATGCATGTGTCTGAAGACTAG
 
. : . : . : . : . : . :
rJMSF013N19+ GTGAGAATTGAGGTTTAATTTCTCTACTTTCTATTTTAGAATTGTTCCAATATT
rJMSF017M07+ GTGAGAATTGAGGTTTAATTTCTCTACTTTCTATTTTAGAATTGTTCCAATATT
rJMSF029J09+ GTGAGAATTGAGGTTTAATTTCTCTACTTTCTATTTTAGAATTGTTCCAATATTTGATGG
                      ____________________________________________________________
consensus GTGAGAATTGAGGTTTAATTTCTCTACTTTCTATTTTAGAATTGTTCCAATATTTGATGG