| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001M11 | Sequence | 406 | 005713 (6) | ref|XP_004300651.1| | 4e-33 | PREDICTED: 5'-adenylylsulfate reductase-like 4 [Fragaria vesca subsp. vesca] | 708 | 005713 (6) | ref|XP_006364863.1| | 2e-88 | PREDICTED: 5'-adenylylsulfate reductase-like 4-like [Solanum tuberosum] |
| JMFF022A10 | Sequence | 583 | 005713 (6) | ref|XP_006364863.1| | 2e-64 | PREDICTED: 5'-adenylylsulfate reductase-like 4-like [Solanum tuberosum] | 782 | 005713 (6) | ref|XP_006364863.1| | 2e-94 | PREDICTED: 5'-adenylylsulfate reductase-like 4-like [Solanum tuberosum] |
| JMSF029E18 | Sequence | 657 | 005713 (6) | ref|XP_006364863.1| | 1e-77 | PREDICTED: 5'-adenylylsulfate reductase-like 4-like [Solanum tuberosum] | 761 | 005713 (6) | emb|CDP01065.1| | 2e-84 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFF001M11- AATTCTTACTGGATTATACTTTAATTCTGGAATGGCGAGATTGAG
JMFF022A10- ACTGGATTATACTTTAATTCTGGAATGGCGAGATTGAG
JMSF029E18- ACTGGATTATACTTTAATTCTGGAATGGCGAGATTGAG
____________________________________________________________
consensus AATTCTTACTGGATTATACTTTAATTCTGGAATGGCGAGATTGAG
. : . : . : . : . : . :
JMFF001M11- AGAATGGAGAGCGGGAATGGCTCTGCTGATGATCGTCGGGAGGCTAACCTGCGCTCACAC
JMFF022A10- AGAATGGAGAGCGGGAATGGCTCTGCTGATGATCGTCGGGAGGCTAACCTGCGCTCACAC
JMSF029E18- AGAATGGAGAGCGGGAATGGCTCTGCTGATGATCGTCGGGAGGCTAACCTGCGCTCACAC
____________________________________________________________
consensus AGAATGGAGAGCGGGAATGGCTCTGCTGATGATCGTCGGGAGGCTAACCTGCGCTCACAC
. : . : . : . : . : . :
JMFF001M11- TCTCACTGCGCCGTTCCCCGCCCTCTGCTGCTCAAAGTATTCGGCTAAGGACTGGATTTT
JMFF022A10- TCTCACTGCGCCGTTCCCCGCCCTCTGCTGCTCAAAGTATTCGGCTAAGGACTGGATTTT
JMSF029E18- TCTCACTGCGCCGTTCCCCGCCCTCTGCTGCTCAAAGTATTCGGCTAAGGACTGGATTTT
____________________________________________________________
consensus TCTCACTGCGCCGTTCCCCGCCCTCTGCTGCTCAAAGTATTCGGCTAAGGACTGGATTTT
. : . : . : . : . : . :
JMFF001M11- CGCCCTCCCGGATTCTACATGTTCGATAGATGAAATCAAATCTTCATGCTCCACCGCTGT
JMFF022A10- CGCCCTCCCGGATTCTACATGTTCGATAGATGAAATCAAATCTTCATGCTCCACCGCTGT
JMSF029E18- CGCCCTCCCGGATTCTACATGTTCGATAGATGAAATCAAATCTTCATGCTCCACCGCTGT
____________________________________________________________
consensus CGCCCTCCCGGATTCTACATGTTCGATAGATGAAATCAAATCTTCATGCTCCACCGCTGT
. : . : . : . : . : . :
JMFF001M11- AATCGAGGGAGATGAGAAATCATTGCAGAGGGCACTGGATGTGGTTCATAGGAGATCGCA
JMFF022A10- AATCGAGGGAGATGAGAAATCATTGCAGAGGGCACTGGATGTGGTTCATAGGAGATCGCA
JMSF029E18- AATCGAGGGAGATGAGAAATCATTGCAGAGGGCACTGGATGTGGTTCATAGGAGATCGCA
____________________________________________________________
consensus AATCGAGGGAGATGAGAAATCATTGCAGAGGGCACTGGATGTGGTTCATAGGAGATCGCA
. : . : . : . : . : . :
JMFF001M11- TGATTATGTTGCTTTGCTCTTCTACGCTTCTTGGTGCCCTTTCTCCAGGAAGTTTAAACC
JMFF022A10- TGATTATGTTGCTTTGCTCTTCTACGCTTCTTGGTGCCCTTTCTCCAGGAAGTTTAAACC
JMSF029E18- TGATTATGTTGCTTTACTCTTCTACGCTTCTTGGTGCCCTTTCTCCAGGAAGTTTAAACC
rJMFF022A10+ AGGAAGTTTAAACC
____________________________________________________________
consensus TGATTATGTTGCTTTGCTCTTCTACGCTTCTTGGTGCCCTTTCTCCAGGAAGTTTAAACC
. : . : . : . : . : . :
JMFF001M11- AATATTTTCTGTTGTATCTTCGTTGCTTCCCTGGGTTCCTCATTTTGCAATTGAAGAATC
JMFF022A10- AATATTTTCTGTTGTATCTTCGTTGCTTCCCTGGGTTCCTCATTTTGCAATTGAAGAATC
JMSF029E18- AATATTTTCTGTTGTATCTTCGTTGCTTCCCTGGGTTCCTCATTTTGCAATTGAAGAATC
rJMFF001M11+ CCTCATTTTGCAATTGAAGAATC
rJMFF022A10+ AATATTTTCTGTTGTATCTTCGTTGCTTCCCTGGGTTCCTCATTTTGCAATTGAAGAATC
rJMSF029E18+ TGAAGAATC
____________________________________________________________
consensus AATATTTTCTGTTGTATCTTCGTTGCTTCCCTGGGTTCCTCATTTTGCAATTGAAGAATC
. : . : . : . : . : . :
JMFF001M11- A
JMFF022A10- AGCCATTAAACCGAGTACCCTCTCAAAATATGGAGTCATTGGGTTCCCTACTTTGTTCCT
JMSF029E18- AGCCATTAAACCGAGTACCCTCTCAAAATATGGAGTCATTGGGTTCCCTACTTTGTTCCT
rJMFF001M11+ AGCCATTAAACCGAGTACCCTCTCAAAATATGGAGTCATTGGGTTCCCTACTTTGTTCCT
rJMFF022A10+ AGCCATTAAACCGAGTACCCTCTCAAAATATGGAGTCATTGGGTTCCCTACTTTGTTCCT
rJMSF029E18+ AGCCATTAAACCGAGTACCCTCTCAAAATATGGAGTCATTGGGTTCCCTACTTTGTTCCT
____________________________________________________________
consensus AGCCATTAAACCGAGTACCCTCTCAAAATATGGAGTCATTGGGTTCCCTACTTTGTTCCT
. : . : . : . : . : . :
JMFF022A10- TATGAATTCTACAATGCGCTTTCGTTATCATGGCTCCCGGAGTCTTGATTCTCTGGTTGA
JMSF029E18- TATGAATTCTACAATGCGCTTTCGTTATCATGGCTCCCGGAGTCTTGATTCTCTGGTTGA
rJMFF001M11+ TATGAATTCTACAATGCGCTTTCGTTATCATGGCTCCCGGAGTCTTGATTCTCTGGTTGA
rJMFF022A10+ TATGAATTCTACAATGCGCTTTCGTTATCATGGCTCCCGGAGTCTTGATTCTCTGGTTGA
rJMSF029E18+ TATGAATTCTACAATGCGCTTTCGTTATCATGGCTCCCGGAGTCTTGATTCTCTGGTTGA
____________________________________________________________
consensus TATGAATTCTACAATGCGCTTTCGTTATCATGGCTCCCGGAGTCTTGATTCTCTGGTTGA
. : . : . : . : . : . :
JMFF022A10- TTTCTATGGTGATCTTACAGGTGCCGAGACATCATCAAAGGATAACATATCTCTGGAC
JMSF029E18- TTTCTATGGTGATCTTACAGGTGCCGAGACATCATCAAAGGATAACATATCTCTGGACAA
rJMFF001M11+ TTTCTATGGTGATCTTACAGGTGCCGAGACATCATCAAAGGATAACATATCTCTGGACAA
rJMFF022A10+ TTTCTATGGTGATCTTACAGGTGCCGAGACATCATCAAAGGATAACATATCTCTGGACAA
rJMSF029E18+ TTTCTATGGTGATCTTACAGGTGCCGAGACATCATCAAAGGATAACATATCTCTGGACAA
____________________________________________________________
consensus TTTCTATGGTGATCTTACAGGTGCCGAGACATCATCAAAGGATAACATATCTCTGGACAA
. : . : . : . : . : . :
JMSF029E18- GATCAGATGTTCCTCAAATAAACACAGGGATGGTGGTAGTGAGCAGGAAAGCTGCCCGTT
rJMFF001M11+ GATCAGATGTTCCTCAAATAAACACAGGGATGGTGGTAGTGAGCAGGAAAGCTGCCCGTT
rJMFF022A10+ GATCAGATGTCCCTCAAATAAACACAGGGATGGTGGTAGTGAGCAGGAAAGCTGCCCGTT
rJMSF029E18+ GATCAGATGTTCCTCAAATAAACACAGGGATGGTGGTAGTGAGCAGGAAAGCTGCCCGTT
____________________________________________________________
consensus GATCAGATGTTCCTCAAATAAACACAGGGATGGTGGTAGTGAGCAGGAAAGCTGCCCGTT
. : . : . : . : . : . :
JMSF029E18- CTCCTGGTCAAGATCACC
rJMFF001M11+ CTCCTGGTCAAGATCACCTCAGAACTTTCTTCGGCAGGAGACATATTTGGCCTTGGCAAC
rJMFF022A10+ CTCCTGGTCAAGATCACCTCAGAACTTTCTTCGGCAGGAGACATATTTGGCCTTGGCAAC
rJMSF029E18+ CTCCTGGTCAAGATCACCTCAGAACTTTCTTCGGCAGGAGACATATTTGGCCTTGGCAAC
____________________________________________________________
consensus CTCCTGGTCAAGATCACCTCAGAACTTTCTTCGGCAGGAGACATATTTGGCCTTGGCAAC
. : . : . : . : . : . :
rJMFF001M11+ TGCATTCGTTCTTATGAGGTTGCTTTACGTCATTTTCCCAGCTGTGTGCAGGTTTTCTCG
rJMFF022A10+ TGCATTCGTTCTTATGAGGTTGCTTTACGTCATTTTCCCAGCTGTGTGCAGGTTTTCTCG
rJMSF029E18+ TGCATTCGTTCTTATGAGGTTGCTTTACGTCATTTTCCCAGCTGTGTGCAGGTTTTCTCG
____________________________________________________________
consensus TGCATTCGTTCTTATGAGGTTGCTTTACGTCATTTTCCCAGCTGTGTGCAGGTTTTCTCG
. : . : . : . : . : . :
rJMFF001M11+ AGCCTCCAGGAGATGCATTTTAAATCTGAGGACAAGAAGCTCGTGGGAATATCCTCAGCT
rJMFF022A10+ AGCCTCCAGGAGATGCATTTTAAATCTGAGGACAAGAAGCTCGTGGGAATATCCTCAGCT
rJMSF029E18+ AGCCTCCAGGAGATGCATTTTAAATCTGAGGACAAGAAGCTCGTGGGAATATCCTCAGCT
____________________________________________________________
consensus AGCCTCCAGGAGATGCATTTTAAATCTGAGGACAAGAAGCTCGTGGGAATATCCTCAGCT
. : . : . : . : . : . :
rJMFF001M11+ TTGCCCAAGCCGAGCAGTACAGTTCTTTAATTCTTTGAAGGAACCATGTAAGAGAAGTAA
rJMFF022A10+ TTGCCCAAGCCGAGCAGTACAGTTCTTTAATTCTTTGAAGGAACCATGTAAGAGAAGTAA
rJMSF029E18+ TTGCCCAAGCCGAGCAGTACAGTTCTTTAATTCTTTGAAGGAACCATGTAAGAGAAGTAA
____________________________________________________________
consensus TTGCCCAAGCCGAGCAGTACAGTTCTTTAATTCTTTGAAGGAACCATGTAAGAGAAGTAA
. : . : . : . : . : . :
rJMFF001M11+ TCTGCAGGAAGGAGCTATGAATGCCAAGGCATGGGCATCCAAGTCTTTGGCTTCTGTTTC
rJMFF022A10+ TCTGCAGGAAGGAGCTATGAATGCCAAGGCATGGGCATCCAAGTCTTTGGCTTCTGTTTC
rJMSF029E18+ TCTGCAGGAAGGAGCTATGAATGCCAAGGCATGGGCATCCAAGTCTTTGGCTTCTGTTTC
____________________________________________________________
consensus TCTGCAGGAAGGAGCTATGAATGCCAAGGCATGGGCATCCAAGTCTTTGGCTTCTGTTTC
. : . : . : . : . : . :
rJMFF001M11+ AATAGGAGATGCAAGCTCAAGTCGGGCAGTAGCAGTAAGTTCTACTCACTGATTAATTTG
rJMFF022A10+ AATAGGAGATGCAAGCTCAAGTCGGGCAGTAGCAGTAAGTTCTACTCACTGATTAATTTG
rJMSF029E18+ AATAGGAGATGCAAGCTCAAGTCGGGCAGTAGCAGTAAGTTCTACTCACTGATTAATTTG
____________________________________________________________
consensus AATAGGAGATGCAAGCTCAAGTCGGGCAGTAGCAGTAAGTTCTACTCACTGATTAATTTG
. : . : . : . : . : . :
rJMFF001M11+ ATGGCTAAATCTAAACAACATATTT
rJMFF022A10+ ATGGCTAAATCTAAACAACATATTT
rJMSF029E18+ ATGGCTAAATCTAAACAACATATTTTCTTTATAAATGTTCAGCCTACCCTTCAATTGGAT
____________________________________________________________
consensus ATGGCTAAATCTAAACAACATATTTTCTTTATAAATGTTCAGCCTACCCTTCAATTGGAT
. : . : . : . : . : . :
rJMSF029E18+ TGTGTGTTGTATACTTGTATATCACTTCTTTTATACACCATTAAAAGAATAATGCCACCA
____________________________________________________________
consensus TGTGTGTTGTATACTTGTATATCACTTCTTTTATACACCATTAAAAGAATAATGCCACCA