Contig 005709:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF028M19Sequence665005709 (2)ref|XP_009757564.1|2e-112PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [698005709 (2)ref|XP_009757564.1|5e-57PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [

Alignment

This contig is upended


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JMSF028M19-           GCGAAACTCCAACACAGAAATCTTGTGAGGCTTTTAGGATGTTGCGTTCAACAAGGGGAA
                      ____________________________________________________________
consensus             GCGAAACTCCAACACAGAAATCTTGTGAGGCTTTTAGGATGTTGCGTTCAACAAGGGGAA
 
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JMSF028M19-           AAGATGTTGGTGTATGAGTACTTGCCTAACAAAAGCCTCGACAGTTTCATCTTCGATAAT
                      ____________________________________________________________
consensus             AAGATGTTGGTGTATGAGTACTTGCCTAACAAAAGCCTCGACAGTTTCATCTTCGATAAT
 
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JMSF028M19-           AGAGAGGGGATGTCTTTGGATTGGAGAAAGCGTTTTGAAATTATCTCGGGAATTGCTCAA
                      ____________________________________________________________
consensus             AGAGAGGGGATGTCTTTGGATTGGAGAAAGCGTTTTGAAATTATCTCGGGAATTGCTCAA
 
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JMSF028M19-           GGGATATTATATCTTCATCAAGATTCTAGATTAAAAATCATTCACAGGGATTTAAAAGCT
                      ____________________________________________________________
consensus             GGGATATTATATCTTCATCAAGATTCTAGATTAAAAATCATTCACAGGGATTTAAAAGCT
 
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JMSF028M19-           AGCAATGTTTTGTTAGATGCCTCCATGCAACCAAAAATATCGGATTTCGGAATGACTAGA
                      ____________________________________________________________
consensus             AGCAATGTTTTGTTAGATGCCTCCATGCAACCAAAAATATCGGATTTCGGAATGACTAGA
 
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JMSF028M19-           ATTTTTAAAGAAGAACAGGTTGAAGCAAACACAAATCGAGTAGTTGGAACATATGGTTAT
rJMSF028M19+                                AAGCAAACACAAATCGAGTAGTTGGAACATATGGTTAT
                      ____________________________________________________________
consensus             ATTTTTAAAGAAGAACAGGTTGAAGCAAACACAAATCGAGTAGTTGGAACATATGGTTAT
 
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JMSF028M19-           ATGTCACCGGAATATGCAATGGAGGGTCACTTTTCTATAAAATCAGATGTATTCAGTTTC
rJMSF028M19+          ATGTCACCGGAATATGCAATGGAGGGTCACTTTTCTATAAAATCAGATGTATTCAGTTTC
                      ____________________________________________________________
consensus             ATGTCACCGGAATATGCAATGGAGGGTCACTTTTCTATAAAATCAGATGTATTCAGTTTC
 
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JMSF028M19-           GGTGTTTTGATGTTGGAAATTGTTTGTGGGAAGAAGAACAAATACAAGCGCAACGAAAAC
rJMSF028M19+          GGTGTTTTGATGTTGGAAATTGTTTGTGGGAAGAAGAACAAATACAAGCGCAACGAAAAC
                      ____________________________________________________________
consensus             GGTGTTTTGATGTTGGAAATTGTTTGTGGGAAGAAGAACAAATACAAGCGCAACGAAAAC
 
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JMSF028M19-           TCTTTGAATTTAATTGGAGATGTATGGGATTTATGGAATGAAGAAAGATCAATGGAAATA
rJMSF028M19+          TCTTTGAATTTAATTGGAGATGTATGGGATTTATGGAATGAAGAAAGATCAATGGAAATA
                      ____________________________________________________________
consensus             TCTTTGAATTTAATTGGAGATGTATGGGATTTATGGAATGAAGAAAGATCAATGGAAATA
 
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JMSF028M19-           GTGGATTCATCATTAGGGGATTCGGATGATGGTCGAGAAGTTTTGAGGTGTATCCATGTC
rJMSF028M19+          GTGGATTCATCATTAGGGGATTCGGATGATGGTCGAGAAGTTTTGAGGTGTATCCATGTC
                      ____________________________________________________________
consensus             GTGGATTCATCATTAGGGGATTCGGATGATGGTCGAGAAGTTTTGAGGTGTATCCATGTC
 
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JMSF028M19-           GGTCTATTGTGTGTTCAACTATATCCAGATGACAGACCAATCATGTCAGAAGTGATTTTC
rJMSF028M19+          GGTCTATTGTGTGTTCAACTATATCCAGATGACAGACCAATCATGTCAGAAGTGATTTTC
                      ____________________________________________________________
consensus             GGTCTATTGTGTGTTCAACTATATCCAGATGACAGACCAATCATGTCAGAAGTGATTTTC
 
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JMSF028M19-           ATGTT                                                       
rJMSF028M19+          ATGTTAAGTAATAATATTGAACTCGCTCGTCCTAAACCACCAGGATTTATATTCAATCAA
                      ____________________________________________________________
consensus             ATGTTAAGTAATAATATTGAACTCGCTCGTCCTAAACCACCAGGATTTATATTCAATCAA
 
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rJMSF028M19+          GAGAATACACATGCTCCATTCTCATATTCTACAAGTAACGGTGGAAATCAATCAATTAAT
                      ____________________________________________________________
consensus             GAGAATACACATGCTCCATTCTCATATTCTACAAGTAACGGTGGAAATCAATCAATTAAT
 
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rJMSF028M19+          ACTATGTCAATTACTGAACTCGTAGGTCGTTAAACAATCCTTATACCATGGACCAGGGTC
                      ____________________________________________________________
consensus             ACTATGTCAATTACTGAACTCGTAGGTCGTTAAACAATCCTTATACCATGGACCAGGGTC
 
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rJMSF028M19+          CACAGTGCAGTGTGAACCCTGGTGCATGTGTATGTCTCTAAATATTGTGAATTTTATTTC
                      ____________________________________________________________
consensus             CACAGTGCAGTGTGAACCCTGGTGCATGTGTATGTCTCTAAATATTGTGAATTTTATTTC
 
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rJMSF028M19+          TTGTGTTATGAAATCTGTATTTTATGAGTATGAATTCCGTACTTGAAACAAATTAGTAAT
                      ____________________________________________________________
consensus             TTGTGTTATGAAATCTGTATTTTATGAGTATGAATTCCGTACTTGAAACAAATTAGTAAT
 
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rJMSF028M19+          TATGTATTATGTTATGAATTTTTGTGTCTTGTGTTGTGAAATTCAAACCTATGAACATAA
                      ____________________________________________________________
consensus             TATGTATTATGTTATGAATTTTTGTGTCTTGTGTTGTGAAATTCAAACCTATGAACATAA