Contig 005698:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026D21Sequence623005698 (2)ref|XP_008221161.1|114PREDICTED: uncharacterized protein LOC103321163 [Prunus mume]662005698 (2)ref|XP_002285918.1|102PREDICTED: uncharacterized protein LOC100248789 [Vitis vinifera] emb|CBI18884.3|

Alignment

This contig is upended


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JMSF026D21-                                                                     GC
rJMSF026D21+                                                                    GC
                      ____________________________________________________________
consensus                                                                       GC
 
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JMSF026D21-           CTTTTCCTTCTCGTTTCTCCAAAATCACTTCAAATTCATCTGTTGCTTCATCAGCCATCG
rJMSF026D21+          CTTTTCCTTCTCGTTTCTCCAAAATCACTTCAAATTCATCTGTTGCTTCATCAGCCATCG
                      ____________________________________________________________
consensus             CTTTTCCTTCTCGTTTCTCCAAAATCACTTCAAATTCATCTGTTGCTTCATCAGCCATCG
 
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JMSF026D21-           TCTCGTCGCCGGCGGTTCGGATGCTCCGATTCTTTATGCCAAATCGGTACAACCTGGGGA
rJMSF026D21+          TCTCGTCGCCGGCGGTTCGGATGCTCCGATTCTTTATGCCAAATCGGTACAACCTGGGGA
                      ____________________________________________________________
consensus             TCTCGTCGCCGGCGGTTCGGATGCTCCGATTCTTTATGCCAAATCGGTACAACCTGGGGA
 
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JMSF026D21-           AGCGTATAGATATAATATATACATAGAGGGAGAGAGAGATAGGGATTAGAGAGGGAGTGG
rJMSF026D21+          AGCGTATAGATATAATATATACATAGAGGGAGAGAGAGATAGGGATTAGAGAGGGAGTGG
                      ____________________________________________________________
consensus             AGCGTATAGATATAATATATACATAGAGGGAGAGAGAGATAGGGATTAGAGAGGGAGTGG
 
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JMSF026D21-           GGTGGAGCGGCCATGATAACTCGATCGAATTTGGCGGAACAGCTGAGGGAATATCAGATT
rJMSF026D21+          GGTGGAGCGGCCATGATAACTCGATCGAATTTGGCGGAACAGCTGAGGGAATATCAGATT
                      ____________________________________________________________
consensus             GGTGGAGCGGCCATGATAACTCGATCGAATTTGGCGGAACAGCTGAGGGAATATCAGATT
 
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JMSF026D21-           CGATCGAAACATGATTGGGCTTCCGTCTCTTTCTTCTCCTCTACCTCCAATCTCACTACT
rJMSF026D21+          CGATCGAAACATGATTGGGCTTCCGTCTCTTTCTTCTCCTCTACCTCCAATCTCACTACT
                      ____________________________________________________________
consensus             CGATCGAAACATGATTGGGCTTCCGTCTCTTTCTTCTCCTCTACCTCCAATCTCACTACT
 
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JMSF026D21-           TCCAGGGTGGATGTCGTCATCTTTGTAATATGGGAACTTGTCATTTTTGCATGCGTTGTT
rJMSF026D21+          TCCAGGGTGGATGTCGTCATCTTTGTAATATGGGAACTTGTCATTTTTGCATGCGTTGTT
                      ____________________________________________________________
consensus             TCCAGGGTGGATGTCGTCATCTTTGTAATATGGGAACTTGTCATTTTTGCATGCGTTGTT
 
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JMSF026D21-           TTCACCTGTGTTTCACTCTATTTAAGCCATCTAAGGCTTGCTTTGATCTTAATATGCTTT
rJMSF026D21+          TTCACCTGTGTTTCACTCTATTTAAGCCATCTAAGGCTTGCTTTGATCTTAATATGCTTT
                      ____________________________________________________________
consensus             TTCACCTGTGTTTCACTCTATTTAAGCCATCTAAGGCTTGCTTTGATCTTAATATGCTTT
 
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JMSF026D21-           ACATTTCTGCTGTTTATATGCATGAGAATTACAAAGCAGATTANGCTTGCCCGGAAAAAG
rJMSF026D21+          ACATTTCTGCTGTTTATATGCATGAGAATTACAAAGCAGATTAGGCTTGCCCGGAAAAAG
                      ____________________________________________________________
consensus             ACATTTCTGCTGTTTATATGCATGAGAATTACAAAGCAGATTAGGCTTGCCCGGAAAAAG
 
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JMSF026D21-           AAGCGAAGGATGCTACTACCATTATCAATGTANAATTCTAGGGAGGGAATATTCTTTAAC
rJMSF026D21+          AAGCGAAGGATGCTACTACCATTATCAATGTAGAATTCTAGGGAGGGAATATTCTTTAAC
                      ____________________________________________________________
consensus             AAGCGAAGGATGCTACTACCATTATCAATGTAGAATTCTAGGGAGGGAATATTCTTTAAC
 
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JMSF026D21-           AATGTACCCCTACTAGGGTTATGTAAATGGTGAGAAATCTTGGCCACTGCTTCTGCCAAC
rJMSF026D21+          AATGTACCCCTACTAGGGTTATGTAAATGGTGAGAAATCTTGGCCACTGCTTCTGCCAAC
                      ____________________________________________________________
consensus             AATGTACCCCTACTAGGGTTATGTAAATGGTGAGAAATCTTGGCCACTGCTTCTGCCAAC
 
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JMSF026D21-           CTTTTGTTTTTTTTTCCTGGT                                       
rJMSF026D21+          CTTTTGTTTTTTTTTCCTGGTTTCTGTGTATTTTGCTTGAGACCAAGCTGATGGAAGGAC
                      ____________________________________________________________
consensus             CTTTTGTTTTTTTTTCCTGGTTTCTGTGTATTTTGCTTGAGACCAAGCTGATGGAAGGAC