Contig 005697:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF024P07-                                       GGCACAAGGTTGCACCAAACATTGACCAATGT
JMSF025P07-                                       GGCACAAGGTTGCACCAAACATTGACCAATGT
                      ____________________________________________________________
consensus                                         GGCACAAGGTTGCACCAAACATTGACCAATGT
 
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JMSF024P07-           GGTTATTCCTACTTTCGATATCAAGAATCTTGAACCAATCATCTTCAACTCATACGAGGC
JMSF025P07-           GGTTATTCCTACTTTCGATATCAAGAATCTTGAACCAATCATCTTCAACTCATACGAGGC
                      ____________________________________________________________
consensus             GGTTATTCCTACTTTCGATATCAAGAATCTTGAACCAATCATCTTCAACTCATACGAGGC
 
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JMSF024P07-           ACTACAAGGTTCCATCTTGGATGCAAAACTCTCGGACATATGCATTGGTACAACGGCTAC
JMSF025P07-           ACTACAAGGTTCCATCTTGGATGCAAAACTCTCGGACATATGCATTGGTACAACGGCTAC
rJMSF024P07+                           TGGATGCAAAACTCTCGGACATATGCATTGGTACAACGGCTAC
rJMSF025P07+                                         TCGGACATATGCATTGGTACANCGGCTAC
                      ____________________________________________________________
consensus             ACTACAAGGTTCCATCTTGGATGCAAAACTCTCGGACATATGCATTGGTACAACGGCTAC
 
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JMSF024P07-           ACCAACCCATATGCCACCATACTATTTCAAGAACAAGGATGTTCAAGGAAGGCAACGAGA
JMSF025P07-           ACCAACCCATATGCCACCATACTATTTCAAGAACAAGGATGTTCAAGGAAGGCAACGAGA
rJMSF024P07+          ACCAACCCATATGCCACCATACTATTTCAAGAACAAGGATGTTCAAGGAAGGCAACGAGA
rJMSF025P07+          ACCNACCCATATGCCACCATACTATTTCAAGAACAAGNATGTTCAAGGAAGGCAACGAGA
                      ____________________________________________________________
consensus             ACCAACCCATATGCCACCATACTATTTCAAGAACAAGGATGTTCAAGGAAGGCAACGAGA
 
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JMSF024P07-           GTTCAACCTCGTTGATGGAACGATTGTAGCTAATAACCCGACATTACTTGCTGTCAATGA
JMSF025P07-           GTTCAACCTCGTTGATGGAACGATTGTAGCTAATAACCCGACATTACTTGCTGTCAATGA
rJMSF024P07+          GTTCAACCTCGTTGATGGAACGATTGTAGCTAATAACCCGACATTACTTGCTGTCAATGA
rJMSF025P07+          GTTCAACCTCGTTGATGGAACGATTGTAGCTAATAACCCGACATTACTTGCTGTCAATGA
                      ____________________________________________________________
consensus             GTTCAACCTCGTTGATGGAACGATTGTAGCTAATAACCCGACATTACTTGCTGTCAATGA
 
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JMSF024P07-           AGTGACTAAGCAAGTGCTGAAGGGACACCCAGATTTTTACCCTGCAAAGCCTTTGGAATT
JMSF025P07-           AGTGACTAAGCAAGTGCTGAAGGGACACCCAGATTTTTACCCTGCAAAGCCTTTGGAATT
rJMSF024P07+          AGTGACTAAGCAAGTGCTGAAGGGACACCCAGATTTTTACCCTGCAAAGCCTTTGGAATT
rJMSF025P07+          AGTGACTAAGCAAGTGCTGAAGGGACACCCAGATTTTTACCCTGCAAAGCCTTTGGAATT
                      ____________________________________________________________
consensus             AGTGACTAAGCAAGTGCTGAAGGGACACCCAGATTTTTACCCTGCAAAGCCTTTGGAATT
 
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JMSF024P07-           CGACCGCTATCTCATAATATCTATTGGGACAGGCTCTGCAAAGAATGAACACAAGTACAG
JMSF025P07-           CGACCGCTATCTCATAATATCTATTGGGACAGGCTCTGCAAAGAATGAACACAAGTACAG
rJMSF024P07+          CGACCGCTATCTCATAATATCTATTGGGACAGGCTCTGCAAAGAATGAACACAAGTACAG
rJMSF025P07+          CGACCGCTATCTCATAATATCTATTGGGACAGGCTCTGCAAAGAATGAACACAAGTACAG
                      ____________________________________________________________
consensus             CGACCGCTATCTCATAATATCTATTGGGACAGGCTCTGCAAAGAATGAACACAAGTACAG
 
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JMSF024P07-           TTCTAGAACTGTGGCAAAGTGGGGGATGTTTGACTGGCTGTTCAATGGGAGCTCTACTCC
JMSF025P07-           TTCTAGAACTGTGGCAAAGTGGGGGATGTTTGACTGGCTGTTCAATGGGAGCTCTACTCC
rJMSF024P07+          TTCTAGAACTGTGGCAAAGTGGGGGATGTTTGACTGGCTGTTCAATGGGAGCTCTACTCC
rJMSF025P07+          TTCTAGAACTGTGGCAAAGTGGGGGATGTTTGACTGGCTGTTCAATGGGAGCTCTACTCC
                      ____________________________________________________________
consensus             TTCTAGAACTGTGGCAAAGTGGGGGATGTTTGACTGGCTGTTCAATGGGAGCTCTACTCC
 
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JMSF024P07-           ATTAATGGAGGCTTTTCATCAAGCTAGTGGAGCTACGGTTGATCTTCAGAGCTCTGTTCT
JMSF025P07-           ATTAATGGAGGCTTTTCATCAAGCTAGTGGAGCTACGGTTGATCTTCAGAGCTCTGTTCT
rJMSF024P07+          ATTAATGGAGGCTTTTCATCAAGCTAGTGGAGCTACGGTTGATCTTCAGAGCTCTGTTCT
rJMSF025P07+          ATTAATGGAGGCTTTTCATCAAGCTAGTGGAGCTACGGTTGATCTTCAGAGCTCTGTTCT
                      ____________________________________________________________
consensus             ATTAATGGAGGCTTTTCATCAAGCTAGTGGAGCTACGGTTGATCTTCAGAGCTCTGTTCT
 
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JMSF024P07-           CTTCAAAGCTCTTCAATCAGAAGATAAATACATCCGAATCCAAGATAATACACTGACTGG
JMSF025P07-           CTTCAAAGCTCTTCAATCAGAAGATAAATACATCCGAATCCAAGATAATACACTGACTGG
rJMSF024P07+          CTTCAAAGCTCTTCAATCAGAAGATAAATACATCCGAATCCAAGATAATACACTGACTGG
rJMSF025P07+          CTTCAAAGCTCTTCAATCAGAAGATAAATACATCCGAATCCAAGATAATACACTGACTGG
                      ____________________________________________________________
consensus             CTTCAAAGCTCTTCAATCAGAAGATAAATACATCCGAATCCAAGATAATACACTGACTGG
 
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JMSF024P07-           GGCTTTGTCCTCTATGGATGAAGCAACTAAGGAG                          
JMSF025P07-           GGCTTTGTCCTCTATGGATGAAGCAACTAAGGAGAATTTGGGAAATCTTATCAGGGTTGG
rJMSF024P07+          GGCTTTGTCCTCTATGGATGAAGCAACTAAGGAGAATTTGGGAAATCTTATCAGGGTTGG
rJMSF025P07+          GGCTTTGTCCTCTATGGATGAAGCAACTAAGGAGAATTTGGGAAATCTTATCAGGGTTGG
                      ____________________________________________________________
consensus             GGCTTTGTCCTCTATGGATGAAGCAACTAAGGAGAATTTGGGAAATCTTATCAGGGTTGG
 
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JMSF025P07-           AGAGAATCTATTGAGAAAACCCGTTTTCA                               
rJMSF024P07+          AGAGAATCTATTGAGAAAACCCGTTTTCAAGGTTGATCTAAATACTGGAGAATATAAACC
rJMSF025P07+          AGAGAATCTATTGAGAAANCCCGTTTTCAAGGTTGATCTAAATACTGGAGAATATAAACC
                      ____________________________________________________________
consensus             AGAGAATCTATTGAGAAAACCCGTTTTCAAGGTTGATCTAAATACTGGAGAATATAAACC
 
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rJMSF024P07+          AGTGAATAACGGAGAAACCAACATGGAAGCACTTCAAAAGTTTGCAAAACTTCTTTCGGA
rJMSF025P07+          AGTGAATAACGGAGAAACCAACATGGAAGCACTTCAAAAGTTTGCAAAACTTCTTTCGGA
                      ____________________________________________________________
consensus             AGTGAATAACGGAGAAACCAACATGGAAGCACTTCAAAAGTTTGCAAAACTTCTTTCGGA
 
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rJMSF024P07+          TGAAAGGAAACTGCGGCTTTCACAATTGTCTCTTCCTTTGAGTGATTATGTACCCTTCTA
rJMSF025P07+          TGAAAGGAAACTGCGGCTTTCACAATTGTCTCTTCCTTTGAGTGATTATGTACCCTTCTA
                      ____________________________________________________________
consensus             TGAAAGGAAACTGCGGCTTTCACAATTGTCTCTTCCTTTGAGTGATTATGTACCCTTCTA
 
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rJMSF024P07+          GTTAAGGAGTACTGCAAAATGTAAGAAATCTGTGTAAGAAAAGCCTTCAATCAATAAT  
rJMSF025P07+          GTTAAGGAGTACTGCAAAATGTAAGAAATCTGTGTAAGAAAAGCCTTCAATCAATAATGG
                      ____________________________________________________________
consensus             GTTAAGGAGTACTGCAAAATGTAAGAAATCTGTGTAAGAAAAGCCTTCAATCAATAATGG