Contig 005695:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS036F01Sequence393005695 (3)ref|XP_010089088.1|6e-21Mitogen-activated protein kinase kinase kinase 2 [Morus notabilis] gb|EXB37335.1
JMSF002P24Sequence314002054 (5)700005695 (3)
JMSF025F01Sequence671002054 (5)ref|XP_007143449.1|8e-18hypothetical protein PHAVU_007G0728000g, partial [Phaseolus vulgaris] gb|ESW1544738005695 (3)

Alignment

This contig is upended


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JMFS036F01-                                                        TATATCATGCCCAGT
                      ____________________________________________________________
consensus                                                          TATATCATGCCCAGT
 
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JMFS036F01-           TTCTCCAGTTGGGAGCCCGCTTTTGCATTCAAGATCACCTCAACATATGAGTCCAATACT
                      ____________________________________________________________
consensus             TTCTCCAGTTGGGAGCCCGCTTTTGCATTCAAGATCACCTCAACATATGAGTCCAATACT
 
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JMFS036F01-           GTCTCCTTCTCCCATTTCAAGCCCCCGGGCCACATCTGGCACATCCACCCCTCTGACGAG
                      ____________________________________________________________
consensus             GTCTCCTTCTCCCATTTCAAGCCCCCGGGCCACATCTGGCACATCCACCCCTCTGACGAG
 
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JMFS036F01-           TGGCAGTGGTGTCATTCCAATGTTTACTCCCAAGTCACCAACAAATCCAAGGTCCCAAAG
                      ____________________________________________________________
consensus             TGGCAGTGGTGTCATTCCAATGTTTACTCCCAAGTCACCAACAAATCCAAGGTCCCAAAG
 
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JMFS036F01-           CGGGTTTTACCCCAATGGAAATGCATGTCAAGATCTTAAACCTGACATATTTAGAGGGAT
                      ____________________________________________________________
consensus             CGGGTTTTACCCCAATGGAAATGCATGTCAAGATCTTAAACCTGACATATTTAGAGGGAT
 
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JMFS036F01-           TCCTCAAACTCATTTGTTTGGAGAAACAGTTGCAGCATCTGCCCAAGGGGGCTCATATGA
                      ____________________________________________________________
consensus             TCCTCAAACTCATTTGTTTGGAGAAACAGTTGCAGCATCTGCCCAAGGGGGCTCATATGA
 
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JMFS036F01-           TGGACAATCACTATTAGCTGATAGGGTGGCTCAACAGCTGCTGAGAGGTCATGTGAAATT
rJMSF002P24+          TGGACAATCACTATTAGCTGATAGGGTGGCTCAACAGCTGCTGNGAGGTCATGTGAANTT
rJMSF025F01+                                                      GAGGTCATGTGAAATT
                      ____________________________________________________________
consensus             TGGACAATCACTATTAGCTGATAGGGTGGCTCAACAGCTGCTGAGAGGTCATGTGAAATT
 
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JMFS036F01-           GAGCCCATTGTTAGACCC                                          
rJMSF002P24+          GAGCCCATTGTTAGACCCAAATTCATGCTCTCCAGTTCTTGGTCACAACAA-CGGGGTAT
rJMSF025F01+          GAGCCCATTGTTAGACCCAAATTCATGCTCTCCAGTTCTTGGTCACAACAANCGGGGTAT
                      ____________________________________________________________
consensus             GAGCCCATTGTTAGACCCAAATTCATGCTCTCCAGTTCTTGGTCACAACAANCGGGGTAT
 
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rJMSF002P24+          AACTTGATATGCATGCAATCTTCTTCAACGGATGNCTTGTGACGTTGTACAGTCGCTGCT
rJMSF025F01+          AACTTGATATGCATGCAATCTTCTTCAACGGATGACTTGTGACGTTGTACAGTCGCTGCT
                      ____________________________________________________________
consensus             AACTTGATATGCATGCAATCTTCTTCAACGGATGACTTGTGACGTTGTACAGTCGCTGCT
 
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rJMSF002P24+          AACAGGAAAGGAGTAGAAGTAATAGGGTGGCCCTAGAAATAATAACTTCCTTAGGAGGGA
rJMSF025F01+          AACAGGAAAGGAGTAGAAGTAATAGGGTGGCCCTAGAAATAATAACTTCCTTAGGAGGGA
                      ____________________________________________________________
consensus             AACAGGAAAGGAGTAGAAGTAATAGGGTGGCCCTAGAAATAATAACTTCCTTAGGAGGGA
 
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rJMSF002P24+          GGGGAATGAAAAAATCCAACAAGGGTCAATACCGAGCAGCAGCCACCATCTCAAAATTTT
rJMSF025F01+          GGGGAATGAAAAAATCCAACAAGGGTCAATACCGAGCAGCAGCCACCATCTCAAAATTTT
                      ____________________________________________________________
consensus             GGGGAATGAAAAAATCCAACAAGGGTCAATACCGAGCAGCAGCCACCATCTCAAAATTTT
 
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rJMSF002P24+          CAAGTTTCAGTTCCTAAACTGGGGCTGGGGTTGCCTACAAACAAAATGCCTCAATTTTTA
rJMSF025F01+          CAAGTTTCAGTTCCTAAACTGGGGCTGGGGTTGCCTACAAACAAAATGCCTCAATTTTTA
                      ____________________________________________________________
consensus             CAAGTTTCAGTTCCTAAACTGGGGCTGGGGTTGCCTACAAACAAAATGCCTCAATTTTTA
 
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rJMSF002P24+          GTTACGACTTTGATATTGATAGTTGAAAGAAACCACCCCCNCCTGNGGTACAATTCTTTG
rJMSF025F01+          GTTACGACTTTGATATTGATAGTTGAAAGAAACCACCCCCACCTGTGGTACAATTCTTTG
                      ____________________________________________________________
consensus             GTTACGACTTTGATATTGATAGTTGAAAGAAACCACCCCCACCTGTGGTACAATTCTTTG
 
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rJMSF002P24+          ACACGCCTGCCTGCTTTAATGGAATGANGGAAGGTCTAGTTCAGCAGTATTACATTTACA
rJMSF025F01+          ACACGCCTGCCTGCTTTAATGGAATGAAGGAAGGTCTAGTTCAGCAGTATTACATTTACA
                      ____________________________________________________________
consensus             ACACGCCTGCCTGCTTTAATGGAATGAAGGAAGGTCTAGTTCAGCAGTATTACATTTACA
 
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rJMSF002P24+          TANGTNGGGAGGCNGCCTAGTTAGTGTAAATTTTAGGAGGGTTCCATTATTGTTGAGAAG
rJMSF025F01+          TATGTTGGGAGGCTGCCTAGTTAGTGTAAATTTTAGGAGGGTTCCATTATTGTTGAGAAG
                      ____________________________________________________________
consensus             TATGTTGGGAGGCTGCCTAGTTAGTGTAAATTTTAGGAGGGTTCCATTATTGTTGAGAAG
 
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rJMSF002P24+          AGAATTAATTACCTCAGGCTCAGGGTCAGGAATAGGATGTGTAAGCTAAGCATTTAGCTA
rJMSF025F01+          AGAATTAATTACCTCAGGCTCAGGGTCAGGAATAGGATGTGTAAGCTAAGCATTTAGCTA
                      ____________________________________________________________
consensus             AGAATTAATTACCTCAGGCTCAGGGTCAGGAATAGGATGTGTAAGCTAAGCATTTAGCTA
 
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rJMSF002P24+          GCTAGNTTCAGTCATATATATATTCTTTTTAGGTGGGGTGTGTATGTGGATTNGAATGAT
rJMSF025F01+          GCTAGGTTCAGTCATATATATATTCTTTTTAGGTGGGGTGTGTATGTGGATTGGAATGAT
                      ____________________________________________________________
consensus             GCTAGGTTCAGTCATATATATATTCTTTTTAGGTGGGGTGTGTATGTGGATTGGAATGAT
 
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rJMSF002P24+          NGGAGAAGCCCTATAATACTTACTGCTCACTGCTAGT                       
rJMSF025F01+          GGGAGAAGCCCTATAATACTTACTGCTCACTGCTAGTTGTACAGGTTGGATACTTATTAT
                      ____________________________________________________________
consensus             GGGAGAAGCCCTATAATACTTACTGCTCACTGCTAGTTGTACAGGTTGGATACTTATTAT
 
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rJMSF025F01+          AGTGTAAGTTTGTAGGAATATGCAAATTTTTGGTGCGTACAGTAACCAGGCTTGCTTGCA
                      ____________________________________________________________
consensus             AGTGTAAGTTTGTAGGAATATGCAAATTTTTGGTGCGTACAGTAACCAGGCTTGCTTGCA