| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF049P10 | Sequence | 636 | 015326 | emb|CDO97478.1| | 2e-39 | unnamed protein product [Coffea canephora] | 611 | 005691 (5) | ref|XP_011087842.1| | 3e-36 | PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 [Sesamum |
| JMFS120H09 | Sequence | 386 | 005691 (5) | ||||||||
| JMSF013K12 | Sequence | 354 | 002243 (4) | 743 | 005691 (5) | emb|CDO97478.1| | 2e-54 | unnamed protein product [Coffea canephora] | |||
| JMSF024J09 | Sequence | 677 | 002243 (4) | emb|CDO97478.1| | 7e-53 | unnamed protein product [Coffea canephora] | 740 | 005691 (5) | ref|XP_011087842.1| | 3e-43 | PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 [Sesamum |
| JMSF049D23 | Sequence | 660 | 002243 (4) | emb|CDO97478.1| | 5e-57 | unnamed protein product [Coffea canephora] | 494 | 005691 (5) | gb|ADO86983.1| | 1e-08 | SERK3B [Nicotiana benthamiana] |
This contig is upended
. : . : . : . : . : . :
rJMSF013K12+ TNTCAG
____________________________________________________________
consensus TNTCAG
. : . : . : . : . : . :
rJMSF013K12+ AGAAAACAGATGTGTTCGGGTANGGAGTTATGCTTCTGGAGATCATAACCGGGCAGAGGG
____________________________________________________________
consensus AGAAAACAGATGTGTTCGGGTANGGAGTTATGCTTCTGGAGATCATAACCGGGCAGAGGG
. : . : . : . : . : . :
rJMSF013K12+ CCTTTGATCTTGCCCGCCTTGCCAAAGATGATGATTTCAAGCTGCTCGACTGGGTGAAAC
____________________________________________________________
consensus CCTTTGATCTTGCCCGCCTTGCCAAAGATGATGATTTCAAGCTGCTCGACTGGGTGAAAC
. : . : . : . : . : . :
rJMSF013K12+ ANCTGCTAAAGGACAAGAAATATGAGACATTTGTGGATATAGATCTTCAAGGAGACTTTG
rJMSF024J09+ GTGGACATAGATCTTCAAGGAGACTTTG
____________________________________________________________
consensus ANCTGCTAAAGGACAAGAAATATGAGACATTTGTGGATATAGATCTTCAAGGAGACTTTG
. : . : . : . : . : . :
rJMSF013K12+ TTGAAGAGGAAGTGGAGCAGCTAATCCAGGTAGCTCTACTCTGCACACGATACTCGCGGT
rJMFF049P10+ GGAGCAGCTAATCCAGGTAGCTCTTCTTTGCACACAAAACTCTCCAT
rJMSF024J09+ NTGAAGAGGAAGTGGAGCAGCTAATCCAGGTAGCTCTTCTTTGCACACAAAACTCTCCAT
____________________________________________________________
consensus TTGAAGAGGAAGTGGAGCAGCTAATCCAGGTAGCTCTTCTTTGCACACAAAACTCTCCAT
. : . : . : . : . : . :
rJMSF013K12+ TCAACCGTCCCAAGATGTCTGAAGTTGTGCGGATGCTAGATGGCGACGGCCTGGCTGAGA
rJMFF049P10+ TGGAGCGCCCAAAGATGTCTGAAGTTGTAAGGATGCTAGATGGCGACGGCCTGGCTGAGA
rJMSF049D23+ A
rJMSF024J09+ TGGAGCGCCCAAAGATGTCTGAAGTTGTAAGGATGCTAGATGGCGACGGCCTGGCTGAGA
____________________________________________________________
consensus TGGAGCGCCCAAAGATGTCTGAAGTTGTAAGGATGCTAGATGGCGACGGCCTGGCTGAGA
. : . : . : . : . : . :
rJMSF013K12+ AGTGGGAGGAGTGGCAGAAGGAAGAAACTTTCCGGGCAGATCTCCTCCACACCCACCACC
rJMFF049P10+ AGTGGGAGGAGTGGCAGAAGGAAGAAACTTTCCGGGCAGATTTCCTCCACACCCACCACC
rJMSF049D23+ AGTGGGAGGAGTGGCAGAAGGAAGAAACTTTCCGGGCAGATCTCCTCCACACCCACCACC
rJMSF024J09+ AGTGGGAGGAGTGGCAGAAGGAAGAAACTTTCCGGGCAGATCTCCTCCACACCCACCACC
____________________________________________________________
consensus AGTGGGAGGAGTGGCAGAAGGAAGAAACTTTCCGGGCAGATCTCCTCCACACCCACCACC
. : . : . : . : . : . :
rJMSF013K12+ ACAATCCTAACACCGAATGGATCATCGTCGATTCCACTTCAAATATCCGGCCAGACGAGC
rJMFF049P10+ ACAATCTTAACACCGAATGGATCATCGCCGATTCCACTTCAAATATCCGGCCAGACGAGC
rJMSF049D23+ ACAATCNTAACACCGAATGGATCATCGCCGATTCCACTTCAAATATCCGGCCAGACGAGC
rJMSF024J09+ ACAATCCTAACACCGAATGGATCATCGCCGATTCCACTTCAAATATCCGGCCAGACGAGC
____________________________________________________________
consensus ACAATCCTAACACCGAATGGATCATCGCCGATTCCACTTCAAATATCCGGCCAGACGAGC
. : . : . : . : . : . :
rJMSF013K12+ TGTCTGGCTCGAGATGATGAACCTCCCTTCCTTCTTCCATCACCAAACATGCATTCATCA
rJMFF049P10+ TGTCTGGCCCGAGATGATGAACCTCC------------ATCACCAAACATGCATTCATCA
rJMSF049D23+ TGTCTGGCCCGAGATGATGAACCTCC------------ATCACCAAACATGCATTCATCA
JMFS120H09+ TCC------------ATCACCAAACATGCATTCATCA
rJMSF024J09+ TGTCTGGCCCGAGATGATGAACCTCC------------ATCACCAAACATGCATTCATCA
____________________________________________________________
consensus TGTCTGGCCCGAGATGATGAACCTCC------------ATCACCAAACATGCATTCATCA
. : . : . : . : . : . :
rJMSF013K12+ TATTCAACCGAGTTTTTTCCACTTTTGGTCCCACACCTATAGAACAATCCCCGCATTTGG
rJMFF049P10+ TATTCAACCGAGTTTTTTCCACTTTTGGTCCCACACCCATAGAACAATCCCCGCATTTGG
rJMSF049D23+ TATTCAACCGAGTTTTTTCCACTTTTGGTCCCACACCCATAGAACAATCCCCGCATTTGG
JMFS120H09+ TATTCAACCGAGTTTTTTCCACTTTTGGTCCCACACCCATAGAACAATCCCCGCATTTGG
rJMSF024J09+ TATTCAACCGAGTTTTTTCCACTTTTGGTCCCACACCCATAGAACAATCCCCGCATTTGG
____________________________________________________________
consensus TATTCAACCGAGTTTTTTCCACTTTTGGTCCCACACCCATAGAACAATCCCCGCATTTGG
. : . : . : . : . : . :
rJMSF013K12+ TACTATTAA
rJMFF049P10+ TACTATTAATGGACTCTAATTTCCGGTCATGATTACGTTTCAGGTGGTGACTTGTCTTAA
rJMSF049D23+ TACTATTAATGGACTCTAATTTCCGGTCATGATTACGTTTCAGGTGGTGACTTGTCTTAA
JMFS120H09+ TACTATTAATGGACTCTAATTTCCGGTCATGATTACGTTTCAGGTGGTGACTTGTCTTAA
rJMSF024J09+ TACTATTAATGGACTCTAATTTCCGGTCATGATTACGTTTCAGGTGGTGACTTGTCTTAA
____________________________________________________________
consensus TACTATTAATGGACTCTAATTTCCGGTCATGATTACGTTTCAGGTGGTGACTTGTCTTAA
. : . : . : . : . : . :
rJMFF049P10+ AGGGCAAAATTGTCATTTTAATTATTTTTTCCTAAACTTTTCGAGGAGAATGACTGGAAA
rJMSF049D23+ AGGGCAAAATTGTCATTTTAATTATTTTTTCCTAAACTTTTCGAGGAGAATGACTGGAAA
JMFS120H09+ AGGGCAAAATTGTCATTTTAATTATTTTTTCCTAAACTTTTCGAGGAGAATGACTGGAAA
rJMSF024J09+ AGGGCAAAATTGTCATTTTAATTATTTTTTCCTAAACTTTTCGAGGAGAATGACTGGAAA
____________________________________________________________
consensus AGGGCAAAATTGTCATTTTAATTATTTTTTCCTAAACTTTTCGAGGAGAATGACTGGAAA
. : . : . : . : . : . :
rJMFF049P10+ TGACAATTTTGCTTTTCAAGATAAGTCAGTTTCTTGAAATTTGGTCACTGGTGACCAAAA
rJMSF049D23+ TGACAATTTTGCTTTTCAAGATAAGTCAGTTTCTTGAAATTTGGTCACTGGTGACCAAAA
JMFS120H09+ TGACAATTTTGCTTTTCAAGATAAGTCAGTTTCTTGAAATTTGGTCCCTGGTGACCAAAA
rJMSF024J09+ TGACAATTTTGCTTTTCAAGATAAGTCAGTTTCTTGAAATTTGGTCACTGGTGACCAAAA
____________________________________________________________
consensus TGACAATTTTGCTTTTCAAGATAAGTCAGTTTCTTGAAATTTGGTCACTGGTGACCAAAA
. : . : . : . : . : . :
rJMFF049P10+ ATTAGGTCAGATGAACTAAATGTGAGACAAAATATGAAAAAAATTAATAGTCGGTGTCCA
rJMSF049D23+ ATTAGGTCAGATGAACTAAATGTGAGACAAAATATGAAAAAAATTAATAGTCGGTGTCCA
JMFS120H09+ ATTAGGTCAGATGAACTAAATGTGAGACAAAATATGAAAAAAATTAATAGTCGGTGTCCA
rJMSF024J09+ ATTAGGTCAGATGAACTAAATGTGAGACAAAATATGAAAAAAATTAATAGTCGGTGTCCA
____________________________________________________________
consensus ATTAGGTCAGATGAACTAAATGTGAGACAAAATATGAAAAAAATTAATAGTCGGTGTCCA
. : . : . : . : . : . :
rJMFF049P10+ AATGTGAACCAGAAGTGGAAAAACTCTATTCAAGCC
rJMSF049D23+ AATGTGAACCAGAAGTGGAAAAACT
JMFS120H09+ AATGTGAACCAGAAGTGGAAAAACTCTATTCAAGCCAAGAAATGTATGTTATGAGATTTT
rJMSF024J09+ AATGTGAACCAGAAGTGGAAAAACTCTATTCAAGCCAAGAAATGTATGTTATGAGATTTT
____________________________________________________________
consensus AATGTGAACCAGAAGTGGAAAAACTCTATTCAAGCCAAGAAATGTATGTTATGAGATTTT
. : . : . : . : . : . :
JMFS120H09+ C
rJMSF024J09+ CAAATTTCTGCAGAATTCATTACACAGAGTGGCCTTACATGATCAACAGCCATTTGCGAT
____________________________________________________________
consensus CAAATTTCTGCAGAATTCATTACACAGAGTGGCCTTACATGATCAACAGCCATTTGCGAT